EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000006440 (Gene tree)
Gene ID: -
Gene Symbol: rab38b
Alias: si:dkey-76a19.3
Full Name: RAB38b%2C member of RAS oncogene family
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 5038 bases
Position: chrKV751332.1:7291644-7296681
Accession: ZDB-GENE-091204-345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000008311	MMR_HSR1	PF01926.23	5.5e-05	1	1
ENSMMOP00000008312	MMR_HSR1	PF01926.23	5.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000008464	-	657	-	ENSMMOP00000008312	218 (aa)	-	-
ENSMMOT00000008463	-	639	-	ENSMMOP00000008311	212 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000006440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000006440's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000006440	rab38b	81	33.333	ENSMMOG00000018976	rab6bb	80	33.333
ENSMMOG00000006440	rab38b	80	37.059	ENSMMOG00000003924	-	83	37.059
ENSMMOG00000006440	rab38b	76	37.888	ENSMMOG00000007951	rab1ab	77	37.888
ENSMMOG00000006440	rab38b	81	36.313	ENSMMOG00000017423	-	83	40.741
ENSMMOG00000006440	rab38b	81	34.659	ENSMMOG00000001238	-	78	34.659
ENSMMOG00000006440	rab38b	77	35.366	ENSMMOG00000007917	rab11bb	78	35.366
ENSMMOG00000006440	rab38b	73	39.506	ENSMMOG00000006631	-	69	38.690
ENSMMOG00000006440	rab38b	94	33.816	ENSMMOG00000020522	rab1ba	99	33.816
ENSMMOG00000006440	rab38b	95	33.990	ENSMMOG00000021817	-	98	33.824
ENSMMOG00000006440	rab38b	82	37.288	ENSMMOG00000017117	rab11al	81	37.288
ENSMMOG00000006440	rab38b	79	35.928	ENSMMOG00000001250	-	75	35.503
ENSMMOG00000006440	rab38b	80	33.529	ENSMMOG00000014358	rab42a	76	33.529
ENSMMOG00000006440	rab38b	95	33.990	ENSMMOG00000001434	RAB7A	98	33.824
ENSMMOG00000006440	rab38b	72	39.103	ENSMMOG00000010077	rab33a	72	38.509
ENSMMOG00000006440	rab38b	99	34.286	ENSMMOG00000017443	rab33ba	93	34.286
ENSMMOG00000006440	rab38b	74	35.849	ENSMMOG00000006947	rab6ba	73	35.849
ENSMMOG00000006440	rab38b	87	31.915	ENSMMOG00000007703	rab23	94	32.663
ENSMMOG00000006440	rab38b	94	33.498	ENSMMOG00000018709	RAB1A	97	33.498
ENSMMOG00000006440	rab38b	93	33.168	ENSMMOG00000019157	rab25a	94	32.057
ENSMMOG00000006440	rab38b	74	38.596	ENSMMOG00000019779	zgc:101559	70	38.596
ENSMMOG00000006440	rab38b	62	30.435	ENSMMOG00000004941	-	65	31.159
ENSMMOG00000006440	rab38b	75	33.951	ENSMMOG00000000304	rab30	76	33.951
ENSMMOG00000006440	rab38b	79	36.628	ENSMMOG00000001649	RAB15	79	36.364
ENSMMOG00000006440	rab38b	74	30.128	ENSMMOG00000019258	RAB17	67	30.128
ENSMMOG00000006440	rab38b	97	30.660	ENSMMOG00000001992	rab41	93	30.660
ENSMMOG00000006440	rab38b	79	33.728	ENSMMOG00000014549	-	80	35.088
ENSMMOG00000006440	rab38b	91	33.495	ENSMMOG00000000110	rab15	92	33.495
ENSMMOG00000006440	rab38b	75	33.962	ENSMMOG00000014491	RAB39B	72	33.962
ENSMMOG00000006440	rab38b	93	35.000	ENSMMOG00000008669	rab9b	90	35.000
ENSMMOG00000006440	rab38b	97	32.864	ENSMMOG00000012367	-	96	32.864
ENSMMOG00000006440	rab38b	80	37.647	ENSMMOG00000020140	si:dkey-16l2.16	77	37.647
ENSMMOG00000006440	rab38b	93	33.166	ENSMMOG00000020069	rab9a	90	33.166
ENSMMOG00000006440	rab38b	74	34.395	ENSMMOG00000016209	rab6a	73	34.395
ENSMMOG00000006440	rab38b	76	39.130	ENSMMOG00000009833	-	73	39.130
ENSMMOG00000006440	rab38b	74	35.443	ENSMMOG00000004059	rab22a	78	35.443
ENSMMOG00000006440	rab38b	78	36.527	ENSMMOG00000015287	rab4a	75	36.527

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000006440	rab38b	96	71.569	ENSAMXG00000036330	RAB38	98	70.423	Astyanax_mexicanus
ENSMMOG00000006440	rab38b	53	89.286	ENSFHEG00000018056	rab38b	93	90.265	Fundulus_heteroclitus
ENSMMOG00000006440	rab38b	100	84.906	ENSMALG00000013514	rab38b	99	84.862	Monopterus_albus
ENSMMOG00000006440	rab38b	96	82.843	ENSPNAG00000017466	rab38b	99	81.818	Pygocentrus_nattereri