EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000006519 (Gene tree)
Gene ID: -
Gene Symbol: rif1
Alias: fc38c03|si:dkey-89p3.2|wu:fc38c03
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 72827 bases
Position: chrKV751348.1:964436-1037262
Accession: ZDB-GENE-030131-3406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000008506	Rif1_N	PF12231.8	9.8e-77	1	1
ENSMMOP00000008516	Rif1_N	PF12231.8	1.8e-71	1	1
ENSMMOP00000008524	Rif1_N	PF12231.8	4.1e-69	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000008670	-	7170	-	ENSMMOP00000008516	2389 (aa)	-	-
ENSMMOT00000008678	-	7050	-	ENSMMOP00000008524	2349 (aa)	-	-
ENSMMOT00000008660	-	7203	-	ENSMMOP00000008506	2400 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000006519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000006519's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000006519	rif1	51	48.926	ENSG00000080345	RIF1	97	53.019	Homo_sapiens
ENSMMOG00000006519	rif1	65	63.693	ENSAPOG00000011073	rif1	63	64.067	Acanthochromis_polyacanthus
ENSMMOG00000006519	rif1	64	50.482	ENSAMEG00000008461	RIF1	63	50.482	Ailuropoda_melanoleuca
ENSMMOG00000006519	rif1	93	70.677	ENSACIG00000017765	rif1	99	69.728	Amphilophus_citrinellus
ENSMMOG00000006519	rif1	65	64.205	ENSAOCG00000017231	rif1	64	64.706	Amphiprion_ocellaris
ENSMMOG00000006519	rif1	97	74.289	ENSAPEG00000013228	rif1	99	74.289	Amphiprion_percula
ENSMMOG00000006519	rif1	100	61.535	ENSATEG00000022887	rif1	100	72.093	Anabas_testudineus
ENSMMOG00000006519	rif1	62	50.781	ENSAPLG00000007092	RIF1	67	50.781	Anas_platyrhynchos
ENSMMOG00000006519	rif1	64	47.258	ENSACAG00000003714	RIF1	65	47.500	Anolis_carolinensis
ENSMMOG00000006519	rif1	63	49.518	ENSANAG00000024840	RIF1	62	49.759	Aotus_nancymaae
ENSMMOG00000006519	rif1	85	55.469	ENSAMXG00000010910	rif1	85	55.469	Astyanax_mexicanus
ENSMMOG00000006519	rif1	56	55.172	ENSBTAG00000021020	RIF1	59	55.172	Bos_taurus
ENSMMOG00000006519	rif1	68	49.355	ENSCJAG00000003138	RIF1	66	49.516	Callithrix_jacchus
ENSMMOG00000006519	rif1	64	49.839	ENSCAFG00000005670	RIF1	60	49.839	Canis_familiaris
ENSMMOG00000006519	rif1	63	50.120	ENSCHIG00000020327	RIF1	62	50.120	Capra_hircus
ENSMMOG00000006519	rif1	51	47.101	ENSTSYG00000008861	RIF1	50	47.260	Carlito_syrichta
ENSMMOG00000006519	rif1	55	42.262	ENSCAPG00000008957	RIF1	63	42.262	Cavia_aperea
ENSMMOG00000006519	rif1	64	47.040	ENSCPOG00000037898	RIF1	64	47.124	Cavia_porcellus
ENSMMOG00000006519	rif1	64	49.080	ENSCCAG00000024760	RIF1	66	47.424	Cebus_capucinus
ENSMMOG00000006519	rif1	51	49.562	ENSCATG00000033353	RIF1	62	49.641	Cercocebus_atys
ENSMMOG00000006519	rif1	65	49.783	ENSCLAG00000001517	RIF1	65	49.695	Chinchilla_lanigera
ENSMMOG00000006519	rif1	51	49.801	ENSCSAG00000016089	RIF1	50	49.721	Chlorocebus_sabaeus
ENSMMOG00000006519	rif1	61	50.226	ENSCHOG00000007187	RIF1	59	50.226	Choloepus_hoffmanni
ENSMMOG00000006519	rif1	64	50.525	ENSCPBG00000025885	RIF1	70	50.810	Chrysemys_picta_bellii
ENSMMOG00000006519	rif1	51	49.960	ENSCANG00000028962	RIF1	52	49.960	Colobus_angolensis_palliatus
ENSMMOG00000006519	rif1	51	47.612	ENSCGRG00001024589	Rif1	65	47.768	Cricetulus_griseus_chok1gshd
ENSMMOG00000006519	rif1	64	48.882	ENSCGRG00000010713	Rif1	65	49.042	Cricetulus_griseus_crigri
ENSMMOG00000006519	rif1	96	54.861	ENSCSEG00000003945	rif1	99	54.705	Cynoglossus_semilaevis
ENSMMOG00000006519	rif1	99	52.497	ENSCVAG00000022479	rif1	99	52.972	Cyprinodon_variegatus
ENSMMOG00000006519	rif1	70	59.218	ENSDARG00000062650	rif1	72	59.218	Danio_rerio
ENSMMOG00000006519	rif1	64	49.068	ENSDNOG00000011194	RIF1	60	49.068	Dasypus_novemcinctus
ENSMMOG00000006519	rif1	58	59.420	ENSETEG00000012421	RIF1	59	59.420	Echinops_telfairi
ENSMMOG00000006519	rif1	64	50.323	ENSEASG00005023434	RIF1	50	67.105	Equus_asinus_asinus
ENSMMOG00000006519	rif1	60	57.681	ENSECAG00000012679	RIF1	60	57.681	Equus_caballus
ENSMMOG00000006519	rif1	90	52.473	ENSELUG00000006826	rif1	76	53.524	Esox_lucius
ENSMMOG00000006519	rif1	67	49.038	ENSFCAG00000029742	RIF1	66	49.400	Felis_catus
ENSMMOG00000006519	rif1	57	50.378	ENSFALG00000013874	RIF1	65	50.568	Ficedula_albicollis
ENSMMOG00000006519	rif1	68	49.199	ENSFDAG00000006538	RIF1	67	49.287	Fukomys_damarensis
ENSMMOG00000006519	rif1	99	54.768	ENSFHEG00000013721	rif1	99	54.727	Fundulus_heteroclitus
ENSMMOG00000006519	rif1	67	62.411	ENSGMOG00000003517	rif1	100	62.411	Gadus_morhua
ENSMMOG00000006519	rif1	57	49.642	ENSGALG00000012484	RIF1	65	49.730	Gallus_gallus
ENSMMOG00000006519	rif1	96	72.572	ENSGAFG00000017196	rif1	99	72.572	Gambusia_affinis
ENSMMOG00000006519	rif1	74	72.766	ENSGACG00000008579	rif1	88	72.996	Gasterosteus_aculeatus
ENSMMOG00000006519	rif1	64	55.172	ENSGAGG00000012595	RIF1	64	55.172	Gopherus_agassizii
ENSMMOG00000006519	rif1	99	60.121	ENSHBUG00000007125	rif1	99	60.986	Haplochromis_burtoni
ENSMMOG00000006519	rif1	58	54.945	ENSHGLG00100009807	RIF1	61	54.945	Heterocephalus_glaber_male
ENSMMOG00000006519	rif1	99	60.805	ENSHCOG00000015943	rif1	92	59.094	Hippocampus_comes
ENSMMOG00000006519	rif1	66	62.930	ENSIPUG00000021703	rif1	78	57.182	Ictalurus_punctatus
ENSMMOG00000006519	rif1	64	49.102	ENSSTOG00000020712	RIF1	62	50.325	Ictidomys_tridecemlineatus
ENSMMOG00000006519	rif1	64	46.882	ENSJJAG00000023000	Rif1	64	47.573	Jaculus_jaculus
ENSMMOG00000006519	rif1	99	54.082	ENSKMAG00000002852	rif1	99	54.331	Kryptolebias_marmoratus
ENSMMOG00000006519	rif1	99	63.406	ENSLBEG00000023196	rif1	96	63.560	Labrus_bergylta
ENSMMOG00000006519	rif1	64	52.212	ENSLACG00000005425	RIF1	66	52.044	Latimeria_chalumnae
ENSMMOG00000006519	rif1	75	56.970	ENSLOCG00000002657	rif1	83	58.182	Lepisosteus_oculatus
ENSMMOG00000006519	rif1	51	49.558	ENSLAFG00000009796	RIF1	50	49.558	Loxodonta_africana
ENSMMOG00000006519	rif1	63	49.642	ENSMFAG00000032233	RIF1	50	49.721	Macaca_fascicularis
ENSMMOG00000006519	rif1	63	49.642	ENSMMUG00000008611	RIF1	50	49.721	Macaca_mulatta
ENSMMOG00000006519	rif1	63	49.641	ENSMNEG00000031616	RIF1	50	49.800	Macaca_nemestrina
ENSMMOG00000006519	rif1	51	49.562	ENSMLEG00000042945	RIF1	62	49.641	Mandrillus_leucophaeus
ENSMMOG00000006519	rif1	87	63.256	ENSMAMG00000001745	rif1	87	63.256	Mastacembelus_armatus
ENSMMOG00000006519	rif1	96	73.148	ENSMZEG00005020920	rif1	99	73.333	Maylandia_zebra
ENSMMOG00000006519	rif1	64	50.041	ENSMGAG00000012732	RIF1	69	50.661	Meleagris_gallopavo
ENSMMOG00000006519	rif1	63	50.162	ENSMICG00000046127	RIF1	62	50.162	Microcebus_murinus
ENSMMOG00000006519	rif1	52	46.714	ENSMOCG00000009381	Rif1	52	46.714	Microtus_ochrogaster
ENSMMOG00000006519	rif1	51	49.162	ENSMODG00000003703	RIF1	51	49.277	Monodelphis_domestica
ENSMMOG00000006519	rif1	92	65.561	ENSMALG00000016759	rif1	97	65.561	Monopterus_albus
ENSMMOG00000006519	rif1	64	48.413	MGP_CAROLIEiJ_G0023555	Rif1	64	49.476	Mus_caroli
ENSMMOG00000006519	rif1	63	48.083	ENSMUSG00000036202	Rif1	63	48.722	Mus_musculus
ENSMMOG00000006519	rif1	51	45.246	MGP_PahariEiJ_G0025006	Rif1	50	47.059	Mus_pahari
ENSMMOG00000006519	rif1	64	48.456	MGP_SPRETEiJ_G0024476	Rif1	64	48.923	Mus_spretus
ENSMMOG00000006519	rif1	64	50.161	ENSMPUG00000000371	RIF1	63	50.161	Mustela_putorius_furo
ENSMMOG00000006519	rif1	53	47.742	ENSMLUG00000003376	RIF1	59	47.742	Myotis_lucifugus
ENSMMOG00000006519	rif1	65	48.354	ENSNGAG00000009268	Rif1	66	48.475	Nannospalax_galili
ENSMMOG00000006519	rif1	97	69.435	ENSNBRG00000014257	rif1	99	57.858	Neolamprologus_brichardi
ENSMMOG00000006519	rif1	51	48.580	ENSNLEG00000010955	RIF1	51	48.655	Nomascus_leucogenys
ENSMMOG00000006519	rif1	72	46.603	ENSODEG00000003950	RIF1	68	47.092	Octodon_degus
ENSMMOG00000006519	rif1	99	60.514	ENSONIG00000013657	rif1	100	60.841	Oreochromis_niloticus
ENSMMOG00000006519	rif1	54	53.214	ENSOANG00000006078	-	55	53.447	Ornithorhynchus_anatinus
ENSMMOG00000006519	rif1	69	49.079	ENSOCUG00000017435	RIF1	67	50.040	Oryctolagus_cuniculus
ENSMMOG00000006519	rif1	99	51.786	ENSORLG00020001302	rif1	99	51.665	Oryzias_latipes_hni
ENSMMOG00000006519	rif1	99	51.649	ENSORLG00015000009	rif1	99	51.388	Oryzias_latipes_hsok
ENSMMOG00000006519	rif1	63	50.160	ENSOGAG00000006141	RIF1	62	50.160	Otolemur_garnettii
ENSMMOG00000006519	rif1	63	50.357	ENSOARG00000008930	RIF1	62	50.357	Ovis_aries
ENSMMOG00000006519	rif1	51	49.244	ENSPPAG00000023754	RIF1	50	49.401	Pan_paniscus
ENSMMOG00000006519	rif1	67	49.078	ENSPPRG00000003618	RIF1	65	49.719	Panthera_pardus
ENSMMOG00000006519	rif1	67	48.957	ENSPTIG00000020652	RIF1	65	49.719	Panthera_tigris_altaica
ENSMMOG00000006519	rif1	51	49.244	ENSPTRG00000012534	RIF1	62	49.401	Pan_troglodytes
ENSMMOG00000006519	rif1	63	49.562	ENSPANG00000008525	RIF1	50	49.641	Papio_anubis
ENSMMOG00000006519	rif1	73	60.117	ENSPKIG00000004267	rif1	78	60.117	Paramormyrops_kingsleyae
ENSMMOG00000006519	rif1	78	59.002	ENSPMGG00000016141	rif1	92	61.949	Periophthalmus_magnuspinnatus
ENSMMOG00000006519	rif1	64	49.396	ENSPEMG00000000446	Rif1	65	49.476	Peromyscus_maniculatus_bairdii
ENSMMOG00000006519	rif1	64	49.675	ENSPCIG00000009185	RIF1	65	49.675	Phascolarctos_cinereus
ENSMMOG00000006519	rif1	99	54.582	ENSPFOG00000017804	rif1	99	54.784	Poecilia_formosa
ENSMMOG00000006519	rif1	93	52.807	ENSPFOG00000000554	-	99	53.113	Poecilia_formosa
ENSMMOG00000006519	rif1	96	67.424	ENSPLAG00000017945	rif1	99	66.951	Poecilia_latipinna
ENSMMOG00000006519	rif1	90	52.082	ENSPMEG00000006897	-	99	52.306	Poecilia_mexicana
ENSMMOG00000006519	rif1	96	72.966	ENSPREG00000018052	rif1	99	72.966	Poecilia_reticulata
ENSMMOG00000006519	rif1	64	49.285	ENSPPYG00000012846	RIF1	62	49.362	Pongo_abelii
ENSMMOG00000006519	rif1	63	50.162	ENSPCOG00000027888	RIF1	62	50.162	Propithecus_coquereli
ENSMMOG00000006519	rif1	55	57.755	ENSPVAG00000014276	RIF1	56	57.755	Pteropus_vampyrus
ENSMMOG00000006519	rif1	96	73.816	ENSPNYG00000012940	rif1	99	73.816	Pundamilia_nyererei
ENSMMOG00000006519	rif1	68	61.851	ENSPNAG00000016685	rif1	87	53.110	Pygocentrus_nattereri
ENSMMOG00000006519	rif1	64	47.642	ENSRNOG00000054901	Rif1	63	47.771	Rattus_norvegicus
ENSMMOG00000006519	rif1	64	48.846	ENSRBIG00000003704	RIF1	62	49.322	Rhinopithecus_bieti
ENSMMOG00000006519	rif1	64	49.682	ENSRROG00000028206	RIF1	62	49.960	Rhinopithecus_roxellana
ENSMMOG00000006519	rif1	65	54.217	ENSSBOG00000029530	RIF1	61	54.217	Saimiri_boliviensis_boliviensis
ENSMMOG00000006519	rif1	64	48.653	ENSSHAG00000018552	RIF1	64	49.045	Sarcophilus_harrisii
ENSMMOG00000006519	rif1	64	60.258	ENSSFOG00015021539	rif1	74	61.885	Scleropages_formosus
ENSMMOG00000006519	rif1	99	68.984	ENSSMAG00000011704	rif1	96	68.984	Scophthalmus_maximus
ENSMMOG00000006519	rif1	100	60.914	ENSSDUG00000015632	rif1	99	60.979	Seriola_dumerili
ENSMMOG00000006519	rif1	100	62.858	ENSSLDG00000019531	rif1	99	62.923	Seriola_lalandi_dorsalis
ENSMMOG00000006519	rif1	63	49.620	ENSSPUG00000003062	RIF1	66	50.299	Sphenodon_punctatus
ENSMMOG00000006519	rif1	61	77.439	ENSSPAG00000018359	rif1	93	77.439	Stegastes_partitus
ENSMMOG00000006519	rif1	64	49.515	ENSSSCG00000016395	RIF1	63	49.515	Sus_scrofa
ENSMMOG00000006519	rif1	99	58.333	ENSTRUG00000015808	rif1	99	58.147	Takifugu_rubripes
ENSMMOG00000006519	rif1	99	56.413	ENSTNIG00000011538	rif1	100	56.595	Tetraodon_nigroviridis
ENSMMOG00000006519	rif1	60	65.854	ENSTBEG00000016082	RIF1	59	65.854	Tupaia_belangeri
ENSMMOG00000006519	rif1	64	50.162	ENSTTRG00000011190	RIF1	62	50.162	Tursiops_truncatus
ENSMMOG00000006519	rif1	54	50.161	ENSUAMG00000026385	RIF1	58	50.161	Ursus_americanus
ENSMMOG00000006519	rif1	64	50.161	ENSUMAG00000000337	RIF1	62	50.161	Ursus_maritimus
ENSMMOG00000006519	rif1	69	48.341	ENSVPAG00000002162	RIF1	67	48.341	Vicugna_pacos
ENSMMOG00000006519	rif1	64	49.839	ENSVVUG00000011293	RIF1	63	49.839	Vulpes_vulpes
ENSMMOG00000006519	rif1	50	47.132	ENSXETG00000004530	rif1	63	41.710	Xenopus_tropicalis
ENSMMOG00000006519	rif1	99	50.142	ENSXMAG00000000506	rif1	99	51.760	Xiphophorus_maculatus