EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000006528 (Gene tree)
Gene ID: -
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 22860 bases
Position: chrKV751334.1:13857032-13879891
Accession: 17854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000008440	Upf2	PF04050.14	1.6e-32	1	1
ENSMMOP00000008440	MIF4G	PF02854.19	6.3e-75	1	3
ENSMMOP00000008440	MIF4G	PF02854.19	6.3e-75	2	3
ENSMMOP00000008440	MIF4G	PF02854.19	6.3e-75	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000008594	UPF2-201	3687	-	ENSMMOP00000008440	1228 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000006528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000006528's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000006528	UPF2	100	80.125	ENSG00000151461	UPF2	99	79.859	Homo_sapiens
ENSMMOG00000006528	UPF2	100	90.660	ENSAPOG00000015837	UPF2	100	90.821	Acanthochromis_polyacanthus
ENSMMOG00000006528	UPF2	100	79.515	ENSAMEG00000004586	UPF2	90	83.203	Ailuropoda_melanoleuca
ENSMMOG00000006528	UPF2	100	89.107	ENSACIG00000018078	UPF2	100	89.263	Amphilophus_citrinellus
ENSMMOG00000006528	UPF2	100	92.783	ENSAOCG00000016766	UPF2	100	93.023	Amphiprion_ocellaris
ENSMMOG00000006528	UPF2	100	92.863	ENSAPEG00000019084	UPF2	100	93.103	Amphiprion_percula
ENSMMOG00000006528	UPF2	100	89.342	ENSATEG00000021677	UPF2	99	89.498	Anabas_testudineus
ENSMMOG00000006528	UPF2	100	79.193	ENSAPLG00000010287	UPF2	90	84.317	Anas_platyrhynchos
ENSMMOG00000006528	UPF2	100	77.561	ENSACAG00000009259	UPF2	99	79.391	Anolis_carolinensis
ENSMMOG00000006528	UPF2	97	74.313	ENSANAG00000028451	UPF2	91	77.360	Aotus_nancymaae
ENSMMOG00000006528	UPF2	100	89.342	ENSACLG00000012696	UPF2	99	89.498	Astatotilapia_calliptera
ENSMMOG00000006528	UPF2	100	85.737	ENSAMXG00000013700	UPF2	99	86.129	Astyanax_mexicanus
ENSMMOG00000006528	UPF2	100	79.281	ENSBTAG00000000288	UPF2	90	83.116	Bos_taurus
ENSMMOG00000006528	UPF2	100	79.793	ENSCJAG00000020685	UPF2	99	79.141	Callithrix_jacchus
ENSMMOG00000006528	UPF2	100	79.437	ENSCAFG00000004839	UPF2	90	83.203	Canis_familiaris
ENSMMOG00000006528	UPF2	100	80.738	ENSCAFG00020005882	UPF2	90	84.946	Canis_lupus_dingo
ENSMMOG00000006528	UPF2	100	79.203	ENSCHIG00000020359	UPF2	90	83.116	Capra_hircus
ENSMMOG00000006528	UPF2	100	81.075	ENSTSYG00000000935	UPF2	100	81.120	Carlito_syrichta
ENSMMOG00000006528	UPF2	74	77.802	ENSCAPG00000016658	UPF2	93	72.561	Cavia_aperea
ENSMMOG00000006528	UPF2	81	79.191	ENSCPOG00000008809	UPF2	100	77.437	Cavia_porcellus
ENSMMOG00000006528	UPF2	100	74.488	ENSCCAG00000035991	UPF2	99	74.219	Cebus_capucinus
ENSMMOG00000006528	UPF2	100	80.282	ENSCATG00000032679	UPF2	99	80.016	Cercocebus_atys
ENSMMOG00000006528	UPF2	100	79.108	ENSCLAG00000011434	UPF2	99	79.359	Chinchilla_lanigera
ENSMMOG00000006528	UPF2	100	80.282	ENSCSAG00000013372	UPF2	99	80.016	Chlorocebus_sabaeus
ENSMMOG00000006528	UPF2	81	88.000	ENSCHOG00000000422	UPF2	74	90.867	Choloepus_hoffmanni
ENSMMOG00000006528	UPF2	100	78.414	ENSCPBG00000027823	UPF2	91	82.378	Chrysemys_picta_bellii
ENSMMOG00000006528	UPF2	78	48.130	ENSCSAVG00000007772	-	99	47.736	Ciona_savignyi
ENSMMOG00000006528	UPF2	100	76.711	ENSCANG00000040396	UPF2	90	79.072	Colobus_angolensis_palliatus
ENSMMOG00000006528	UPF2	100	78.762	ENSCGRG00001019347	Upf2	99	80.438	Cricetulus_griseus_chok1gshd
ENSMMOG00000006528	UPF2	100	78.762	ENSCGRG00000017993	Upf2	99	80.438	Cricetulus_griseus_crigri
ENSMMOG00000006528	UPF2	91	88.899	ENSCSEG00000003520	UPF2	99	86.897	Cynoglossus_semilaevis
ENSMMOG00000006528	UPF2	99	89.091	ENSCVAG00000006167	UPF2	100	89.723	Cyprinodon_variegatus
ENSMMOG00000006528	UPF2	100	79.359	ENSDNOG00000018160	UPF2	90	83.116	Dasypus_novemcinctus
ENSMMOG00000006528	UPF2	100	79.421	ENSDORG00000002478	Upf2	99	80.375	Dipodomys_ordii
ENSMMOG00000006528	UPF2	90	36.197	FBgn0029992	Upf2	89	39.361	Drosophila_melanogaster
ENSMMOG00000006528	UPF2	57	92.701	ENSETEG00000011583	-	62	92.701	Echinops_telfairi
ENSMMOG00000006528	UPF2	66	71.523	ENSEBUG00000012448	-	96	69.637	Eptatretus_burgeri
ENSMMOG00000006528	UPF2	100	79.421	ENSEASG00005019274	UPF2	89	87.158	Equus_asinus_asinus
ENSMMOG00000006528	UPF2	100	79.421	ENSECAG00000017022	UPF2	90	83.203	Equus_caballus
ENSMMOG00000006528	UPF2	81	70.370	ENSEEUG00000007819	UPF2	72	74.333	Erinaceus_europaeus
ENSMMOG00000006528	UPF2	100	85.071	ENSELUG00000012014	UPF2	99	87.994	Esox_lucius
ENSMMOG00000006528	UPF2	100	84.530	ENSFCAG00000005785	UPF2	90	83.377	Felis_catus
ENSMMOG00000006528	UPF2	72	87.165	ENSFALG00000001889	UPF2	88	84.101	Ficedula_albicollis
ENSMMOG00000006528	UPF2	100	78.700	ENSFDAG00000014348	UPF2	99	79.059	Fukomys_damarensis
ENSMMOG00000006528	UPF2	99	88.449	ENSFHEG00000009826	UPF2	99	88.608	Fundulus_heteroclitus
ENSMMOG00000006528	UPF2	91	86.922	ENSGMOG00000005557	UPF2	100	85.345	Gadus_morhua
ENSMMOG00000006528	UPF2	100	80.829	ENSGALG00000033772	UPF2	90	84.201	Gallus_gallus
ENSMMOG00000006528	UPF2	100	88.619	ENSGAFG00000020867	UPF2	99	88.776	Gambusia_affinis
ENSMMOG00000006528	UPF2	91	88.812	ENSGACG00000001080	UPF2	100	89.961	Gasterosteus_aculeatus
ENSMMOG00000006528	UPF2	100	78.326	ENSGAGG00000002700	UPF2	90	82.450	Gopherus_agassizii
ENSMMOG00000006528	UPF2	100	80.125	ENSGGOG00000001479	UPF2	99	79.859	Gorilla_gorilla
ENSMMOG00000006528	UPF2	100	89.498	ENSHBUG00000004249	UPF2	100	89.655	Haplochromis_burtoni
ENSMMOG00000006528	UPF2	100	70.778	ENSHGLG00000003822	-	99	70.584	Heterocephalus_glaber_female
ENSMMOG00000006528	UPF2	82	80.901	ENSHGLG00000015176	-	99	79.046	Heterocephalus_glaber_female
ENSMMOG00000006528	UPF2	82	78.973	ENSHGLG00100010036	UPF2	89	82.395	Heterocephalus_glaber_male
ENSMMOG00000006528	UPF2	100	86.991	ENSHCOG00000004025	UPF2	99	87.382	Hippocampus_comes
ENSMMOG00000006528	UPF2	100	84.676	ENSIPUG00000015524	UPF2	98	84.885	Ictalurus_punctatus
ENSMMOG00000006528	UPF2	100	79.264	ENSSTOG00000013075	UPF2	99	80.453	Ictidomys_tridecemlineatus
ENSMMOG00000006528	UPF2	100	79.796	ENSJJAG00000004913	Upf2	90	82.825	Jaculus_jaculus
ENSMMOG00000006528	UPF2	99	89.100	ENSKMAG00000001071	UPF2	99	89.258	Kryptolebias_marmoratus
ENSMMOG00000006528	UPF2	100	93.296	ENSLBEG00000016394	-	100	93.457	Labrus_bergylta
ENSMMOG00000006528	UPF2	82	91.691	ENSLBEG00000000728	-	93	91.889	Labrus_bergylta
ENSMMOG00000006528	UPF2	91	75.365	ENSLACG00000015945	UPF2	100	74.708	Latimeria_chalumnae
ENSMMOG00000006528	UPF2	99	85.825	ENSLOCG00000015698	UPF2	99	83.858	Lepisosteus_oculatus
ENSMMOG00000006528	UPF2	100	80.282	ENSMFAG00000043865	UPF2	99	80.016	Macaca_fascicularis
ENSMMOG00000006528	UPF2	100	80.282	ENSMMUG00000008241	UPF2	99	80.016	Macaca_mulatta
ENSMMOG00000006528	UPF2	82	82.762	ENSMNEG00000008062	UPF2	87	86.952	Macaca_nemestrina
ENSMMOG00000006528	UPF2	100	79.134	ENSMLEG00000036120	UPF2	99	80.928	Mandrillus_leucophaeus
ENSMMOG00000006528	UPF2	100	93.414	ENSMAMG00000018276	UPF2	100	93.253	Mastacembelus_armatus
ENSMMOG00000006528	UPF2	100	89.342	ENSMZEG00005021595	UPF2	99	89.498	Maylandia_zebra
ENSMMOG00000006528	UPF2	99	78.852	ENSMGAG00000004573	UPF2	90	83.755	Meleagris_gallopavo
ENSMMOG00000006528	UPF2	100	76.724	ENSMAUG00000016512	Upf2	99	78.404	Mesocricetus_auratus
ENSMMOG00000006528	UPF2	100	81.994	ENSMICG00000001716	UPF2	100	81.877	Microcebus_murinus
ENSMMOG00000006528	UPF2	100	79.199	ENSMOCG00000008263	Upf2	99	79.264	Microtus_ochrogaster
ENSMMOG00000006528	UPF2	100	77.482	ENSMODG00000016794	UPF2	90	82.292	Monodelphis_domestica
ENSMMOG00000006528	UPF2	100	91.799	ENSMALG00000002663	UPF2	100	92.516	Monopterus_albus
ENSMMOG00000006528	UPF2	100	80.000	MGP_CAROLIEiJ_G0023157	Upf2	99	82.650	Mus_caroli
ENSMMOG00000006528	UPF2	100	80.314	ENSMUSG00000043241	Upf2	99	80.375	Mus_musculus
ENSMMOG00000006528	UPF2	100	80.392	MGP_PahariEiJ_G0019217	Upf2	99	80.453	Mus_pahari
ENSMMOG00000006528	UPF2	100	80.549	MGP_SPRETEiJ_G0024075	Upf2	99	80.610	Mus_spretus
ENSMMOG00000006528	UPF2	100	79.437	ENSMPUG00000001064	UPF2	90	83.203	Mustela_putorius_furo
ENSMMOG00000006528	UPF2	100	79.345	ENSMLUG00000000228	UPF2	90	82.914	Myotis_lucifugus
ENSMMOG00000006528	UPF2	100	89.498	ENSNBRG00000013629	UPF2	99	89.655	Neolamprologus_brichardi
ENSMMOG00000006528	UPF2	100	80.203	ENSNLEG00000012058	UPF2	99	79.938	Nomascus_leucogenys
ENSMMOG00000006528	UPF2	72	94.366	ENSOPRG00000006801	-	73	94.366	Ochotona_princeps
ENSMMOG00000006528	UPF2	100	78.845	ENSODEG00000001290	UPF2	99	79.124	Octodon_degus
ENSMMOG00000006528	UPF2	100	89.107	ENSONIG00000017991	UPF2	99	89.263	Oreochromis_niloticus
ENSMMOG00000006528	UPF2	100	79.170	ENSOCUG00000006230	UPF2	90	83.377	Oryctolagus_cuniculus
ENSMMOG00000006528	UPF2	100	88.157	ENSORLG00000017189	UPF2	99	87.216	Oryzias_latipes
ENSMMOG00000006528	UPF2	100	88.235	ENSORLG00020005969	UPF2	99	87.294	Oryzias_latipes_hni
ENSMMOG00000006528	UPF2	100	88.235	ENSORLG00015005713	UPF2	99	87.294	Oryzias_latipes_hsok
ENSMMOG00000006528	UPF2	100	85.243	ENSOMEG00000023420	UPF2	98	85.714	Oryzias_melastigma
ENSMMOG00000006528	UPF2	100	80.501	ENSOGAG00000005796	UPF2	99	80.234	Otolemur_garnettii
ENSMMOG00000006528	UPF2	100	79.001	ENSOARG00000014587	UPF2	90	83.058	Ovis_aries
ENSMMOG00000006528	UPF2	100	78.819	ENSPPAG00000037953	UPF2	90	81.397	Pan_paniscus
ENSMMOG00000006528	UPF2	100	79.515	ENSPPRG00000000690	UPF2	90	83.377	Panthera_pardus
ENSMMOG00000006528	UPF2	100	79.515	ENSPTIG00000008867	UPF2	90	83.377	Panthera_tigris_altaica
ENSMMOG00000006528	UPF2	100	80.125	ENSPTRG00000002291	UPF2	99	79.859	Pan_troglodytes
ENSMMOG00000006528	UPF2	100	80.203	ENSPANG00000023399	UPF2	99	79.938	Papio_anubis
ENSMMOG00000006528	UPF2	100	81.761	ENSPKIG00000025502	UPF2	99	82.629	Paramormyrops_kingsleyae
ENSMMOG00000006528	UPF2	61	76.711	ENSPSIG00000015158	UPF2	79	86.032	Pelodiscus_sinensis
ENSMMOG00000006528	UPF2	100	87.658	ENSPMGG00000005259	UPF2	100	87.737	Periophthalmus_magnuspinnatus
ENSMMOG00000006528	UPF2	93	76.081	ENSPEMG00000015731	Upf2	99	74.928	Peromyscus_maniculatus_bairdii
ENSMMOG00000006528	UPF2	91	81.850	ENSPCIG00000006656	UPF2	90	82.205	Phascolarctos_cinereus
ENSMMOG00000006528	UPF2	100	88.697	ENSPFOG00000017118	UPF2	99	88.619	Poecilia_formosa
ENSMMOG00000006528	UPF2	100	88.776	ENSPLAG00000005094	UPF2	99	88.697	Poecilia_latipinna
ENSMMOG00000006528	UPF2	100	88.619	ENSPMEG00000017009	UPF2	99	88.540	Poecilia_mexicana
ENSMMOG00000006528	UPF2	100	88.845	ENSPREG00000021880	UPF2	100	88.845	Poecilia_reticulata
ENSMMOG00000006528	UPF2	65	81.384	ENSPPYG00000002089	-	99	81.807	Pongo_abelii
ENSMMOG00000006528	UPF2	86	73.035	ENSPCAG00000000684	UPF2	85	73.218	Procavia_capensis
ENSMMOG00000006528	UPF2	100	81.190	ENSPCOG00000021656	UPF2	100	81.075	Propithecus_coquereli
ENSMMOG00000006528	UPF2	100	72.812	ENSPVAG00000017286	UPF2	90	75.478	Pteropus_vampyrus
ENSMMOG00000006528	UPF2	100	88.245	ENSPNYG00000017096	UPF2	100	88.715	Pundamilia_nyererei
ENSMMOG00000006528	UPF2	100	84.815	ENSPNAG00000009357	UPF2	100	85.208	Pygocentrus_nattereri
ENSMMOG00000006528	UPF2	100	76.521	ENSRNOG00000023593	Upf2	98	93.182	Rattus_norvegicus
ENSMMOG00000006528	UPF2	100	79.294	ENSRBIG00000037780	UPF2	100	79.030	Rhinopithecus_bieti
ENSMMOG00000006528	UPF2	100	80.188	ENSRROG00000043547	UPF2	99	80.078	Rhinopithecus_roxellana
ENSMMOG00000006528	UPF2	100	80.513	ENSSBOG00000020012	UPF2	99	79.791	Saimiri_boliviensis_boliviensis
ENSMMOG00000006528	UPF2	100	82.288	ENSSFOG00015023788	upf2	100	82.168	Scleropages_formosus
ENSMMOG00000006528	UPF2	90	86.632	ENSSMAG00000007637	UPF2	100	85.459	Scophthalmus_maximus
ENSMMOG00000006528	UPF2	100	94.265	ENSSDUG00000017244	UPF2	100	94.426	Seriola_dumerili
ENSMMOG00000006528	UPF2	100	94.350	ENSSLDG00000016866	UPF2	100	94.512	Seriola_lalandi_dorsalis
ENSMMOG00000006528	UPF2	100	79.577	ENSSARG00000008615	UPF2	90	82.087	Sorex_araneus
ENSMMOG00000006528	UPF2	100	79.023	ENSSPUG00000014544	UPF2	99	80.449	Sphenodon_punctatus
ENSMMOG00000006528	UPF2	68	81.609	ENSSSCG00000011117	-	99	81.787	Sus_scrofa
ENSMMOG00000006528	UPF2	90	83.247	ENSTGUG00000002163	-	90	84.000	Taeniopygia_guttata
ENSMMOG00000006528	UPF2	100	89.107	ENSTRUG00000007519	UPF2	99	89.734	Takifugu_rubripes
ENSMMOG00000006528	UPF2	100	86.620	ENSTNIG00000004453	UPF2	94	89.983	Tetraodon_nigroviridis
ENSMMOG00000006528	UPF2	93	71.525	ENSTBEG00000012679	UPF2	93	72.544	Tupaia_belangeri
ENSMMOG00000006528	UPF2	100	78.873	ENSTTRG00000016388	UPF2	90	82.942	Tursiops_truncatus
ENSMMOG00000006528	UPF2	89	93.258	ENSUAMG00000023560	UPF2	84	93.258	Ursus_americanus
ENSMMOG00000006528	UPF2	100	79.515	ENSUMAG00000012953	UPF2	85	83.203	Ursus_maritimus
ENSMMOG00000006528	UPF2	84	93.548	ENSVPAG00000006763	UPF2	72	93.548	Vicugna_pacos
ENSMMOG00000006528	UPF2	100	79.437	ENSVVUG00000006166	UPF2	90	83.203	Vulpes_vulpes
ENSMMOG00000006528	UPF2	100	74.770	ENSXETG00000033103	UPF2	99	81.478	Xenopus_tropicalis
ENSMMOG00000006528	UPF2	100	88.697	ENSXCOG00000011604	UPF2	100	88.854	Xiphophorus_couchianus
ENSMMOG00000006528	UPF2	100	88.854	ENSXMAG00000017209	UPF2	99	89.011	Xiphophorus_maculatus