EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000007229 (Gene tree)
Gene ID: -
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 5027 bases
Position: chrKV751390.1:1341757-1346783
Accession: ZDB-GENE-050522-540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000009353	tRNA_Me_trans	PF03054.16	4.9e-128	1	1
ENSMMOP00000009357	tRNA_Me_trans	PF03054.16	4.1e-116	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000009523	-	1227	-	ENSMMOP00000009357	408 (aa)	-	-
ENSMMOT00000009519	-	1242	-	ENSMMOP00000009353	413 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000007229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000007229's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000007229	trmu	97	70.471	ENSG00000100416	TRMU	96	77.358	Homo_sapiens
ENSMMOG00000007229	trmu	100	84.412	ENSAPOG00000014458	trmu	100	84.412	Acanthochromis_polyacanthus
ENSMMOG00000007229	trmu	96	70.175	ENSAMEG00000003319	TRMU	96	70.175	Ailuropoda_melanoleuca
ENSMMOG00000007229	trmu	100	81.490	ENSACIG00000002101	trmu	100	81.490	Amphilophus_citrinellus
ENSMMOG00000007229	trmu	100	84.892	ENSAOCG00000013155	trmu	100	84.892	Amphiprion_ocellaris
ENSMMOG00000007229	trmu	100	84.652	ENSAPEG00000013350	trmu	100	84.652	Amphiprion_percula
ENSMMOG00000007229	trmu	100	83.254	ENSATEG00000007814	trmu	100	83.254	Anabas_testudineus
ENSMMOG00000007229	trmu	90	72.340	ENSAPLG00000016380	TRMU	96	72.340	Anas_platyrhynchos
ENSMMOG00000007229	trmu	97	70.690	ENSACAG00000007720	TRMU	97	70.690	Anolis_carolinensis
ENSMMOG00000007229	trmu	99	68.585	ENSANAG00000038053	TRMU	99	68.585	Aotus_nancymaae
ENSMMOG00000007229	trmu	100	83.173	ENSACLG00000005395	trmu	100	83.173	Astatotilapia_calliptera
ENSMMOG00000007229	trmu	98	77.995	ENSAMXG00000005282	trmu	99	77.995	Astyanax_mexicanus
ENSMMOG00000007229	trmu	99	67.229	ENSBTAG00000005595	TRMU	98	67.229	Bos_taurus
ENSMMOG00000007229	trmu	91	39.846	WBGene00007114	mttu-1	98	39.846	Caenorhabditis_elegans
ENSMMOG00000007229	trmu	99	66.346	ENSCJAG00000000198	TRMU	99	66.346	Callithrix_jacchus
ENSMMOG00000007229	trmu	97	69.727	ENSCAFG00000000779	TRMU	95	69.727	Canis_familiaris
ENSMMOG00000007229	trmu	97	69.727	ENSCAFG00020009184	TRMU	95	69.727	Canis_lupus_dingo
ENSMMOG00000007229	trmu	97	68.486	ENSCHIG00000017074	TRMU	97	68.486	Capra_hircus
ENSMMOG00000007229	trmu	97	69.975	ENSTSYG00000003853	TRMU	96	69.975	Carlito_syrichta
ENSMMOG00000007229	trmu	94	65.526	ENSCAPG00000013034	TRMU	96	65.526	Cavia_aperea
ENSMMOG00000007229	trmu	97	69.975	ENSCPOG00000020780	TRMU	96	69.975	Cavia_porcellus
ENSMMOG00000007229	trmu	99	67.788	ENSCCAG00000021641	TRMU	99	67.788	Cebus_capucinus
ENSMMOG00000007229	trmu	99	68.039	ENSCATG00000032800	TRMU	98	68.039	Cercocebus_atys
ENSMMOG00000007229	trmu	99	68.357	ENSCLAG00000017269	TRMU	98	68.357	Chinchilla_lanigera
ENSMMOG00000007229	trmu	99	68.281	ENSCSAG00000005279	TRMU	98	68.281	Chlorocebus_sabaeus
ENSMMOG00000007229	trmu	89	71.505	ENSCPBG00000011621	TRMU	93	71.505	Chrysemys_picta_bellii
ENSMMOG00000007229	trmu	95	47.208	ENSCING00000019371	-	97	47.208	Ciona_intestinalis
ENSMMOG00000007229	trmu	99	68.523	ENSCANG00000041645	TRMU	98	68.523	Colobus_angolensis_palliatus
ENSMMOG00000007229	trmu	97	68.734	ENSCGRG00001001739	Trmu	96	68.734	Cricetulus_griseus_chok1gshd
ENSMMOG00000007229	trmu	97	63.772	ENSCGRG00000002781	Trmu	96	63.772	Cricetulus_griseus_crigri
ENSMMOG00000007229	trmu	99	76.627	ENSCSEG00000012382	trmu	99	76.627	Cynoglossus_semilaevis
ENSMMOG00000007229	trmu	100	81.490	ENSCVAG00000001366	trmu	100	81.490	Cyprinodon_variegatus
ENSMMOG00000007229	trmu	100	74.519	ENSDARG00000043734	trmu	100	74.519	Danio_rerio
ENSMMOG00000007229	trmu	64	54.478	ENSDNOG00000047245	-	94	54.478	Dasypus_novemcinctus
ENSMMOG00000007229	trmu	96	70.175	ENSDORG00000007455	Trmu	97	70.175	Dipodomys_ordii
ENSMMOG00000007229	trmu	93	43.299	FBgn0040337	CG3021	99	42.750	Drosophila_melanogaster
ENSMMOG00000007229	trmu	95	54.250	ENSEBUG00000007454	trmu	100	55.331	Eptatretus_burgeri
ENSMMOG00000007229	trmu	97	69.479	ENSEASG00005021725	TRMU	96	69.479	Equus_asinus_asinus
ENSMMOG00000007229	trmu	97	69.479	ENSECAG00000000467	TRMU	95	69.479	Equus_caballus
ENSMMOG00000007229	trmu	68	51.408	ENSEEUG00000000074	-	74	77.778	Erinaceus_europaeus
ENSMMOG00000007229	trmu	98	78.049	ENSELUG00000009464	trmu	97	81.232	Esox_lucius
ENSMMOG00000007229	trmu	96	70.175	ENSFCAG00000006533	TRMU	95	70.175	Felis_catus
ENSMMOG00000007229	trmu	89	71.316	ENSFALG00000010035	TRMU	96	71.316	Ficedula_albicollis
ENSMMOG00000007229	trmu	92	69.271	ENSFDAG00000017472	TRMU	97	69.271	Fukomys_damarensis
ENSMMOG00000007229	trmu	100	82.692	ENSFHEG00000003162	trmu	100	82.692	Fundulus_heteroclitus
ENSMMOG00000007229	trmu	97	70.762	ENSGMOG00000001323	trmu	100	70.762	Gadus_morhua
ENSMMOG00000007229	trmu	95	72.208	ENSGALG00000031922	TRMU	95	72.208	Gallus_gallus
ENSMMOG00000007229	trmu	100	83.894	ENSGAFG00000013331	trmu	99	83.894	Gambusia_affinis
ENSMMOG00000007229	trmu	100	78.960	ENSGACG00000019024	trmu	100	78.960	Gasterosteus_aculeatus
ENSMMOG00000007229	trmu	97	70.720	ENSGGOG00000000203	TRMU	83	85.366	Gorilla_gorilla
ENSMMOG00000007229	trmu	100	82.692	ENSHBUG00000023421	trmu	100	82.692	Haplochromis_burtoni
ENSMMOG00000007229	trmu	97	68.395	ENSHGLG00000009278	TRMU	96	68.395	Heterocephalus_glaber_female
ENSMMOG00000007229	trmu	97	68.395	ENSHGLG00100018863	TRMU	96	68.395	Heterocephalus_glaber_male
ENSMMOG00000007229	trmu	99	82.567	ENSHCOG00000013459	trmu	99	82.567	Hippocampus_comes
ENSMMOG00000007229	trmu	100	76.683	ENSIPUG00000009785	trmu	100	76.683	Ictalurus_punctatus
ENSMMOG00000007229	trmu	97	69.727	ENSSTOG00000010993	TRMU	96	69.727	Ictidomys_tridecemlineatus
ENSMMOG00000007229	trmu	97	68.408	ENSJJAG00000000667	Trmu	96	68.408	Jaculus_jaculus
ENSMMOG00000007229	trmu	100	81.010	ENSKMAG00000008516	trmu	100	81.010	Kryptolebias_marmoratus
ENSMMOG00000007229	trmu	100	81.490	ENSLBEG00000018831	trmu	100	81.490	Labrus_bergylta
ENSMMOG00000007229	trmu	99	73.544	ENSLACG00000013713	TRMU	98	73.544	Latimeria_chalumnae
ENSMMOG00000007229	trmu	99	77.536	ENSLOCG00000016066	trmu	99	77.536	Lepisosteus_oculatus
ENSMMOG00000007229	trmu	96	61.905	ENSLAFG00000005129	TRMU	96	61.905	Loxodonta_africana
ENSMMOG00000007229	trmu	99	68.523	ENSMFAG00000039767	TRMU	98	68.523	Macaca_fascicularis
ENSMMOG00000007229	trmu	99	68.523	ENSMMUG00000000807	TRMU	98	68.523	Macaca_mulatta
ENSMMOG00000007229	trmu	99	68.523	ENSMNEG00000028164	TRMU	98	68.523	Macaca_nemestrina
ENSMMOG00000007229	trmu	99	68.039	ENSMLEG00000033884	TRMU	98	68.039	Mandrillus_leucophaeus
ENSMMOG00000007229	trmu	100	82.452	ENSMAMG00000004717	trmu	100	82.452	Mastacembelus_armatus
ENSMMOG00000007229	trmu	100	83.173	ENSMZEG00005015797	trmu	100	83.173	Maylandia_zebra
ENSMMOG00000007229	trmu	76	69.939	ENSMGAG00000007550	TRMU	95	69.939	Meleagris_gallopavo
ENSMMOG00000007229	trmu	96	69.173	ENSMAUG00000022282	Trmu	96	69.173	Mesocricetus_auratus
ENSMMOG00000007229	trmu	96	69.925	ENSMICG00000029046	TRMU	97	69.925	Microcebus_murinus
ENSMMOG00000007229	trmu	97	69.479	ENSMOCG00000014641	Trmu	97	69.479	Microtus_ochrogaster
ENSMMOG00000007229	trmu	96	66.253	ENSMODG00000007433	TRMU	94	66.253	Monodelphis_domestica
ENSMMOG00000007229	trmu	100	80.288	ENSMALG00000007721	trmu	100	80.288	Monopterus_albus
ENSMMOG00000007229	trmu	97	68.983	MGP_CAROLIEiJ_G0020134	Trmu	97	68.983	Mus_caroli
ENSMMOG00000007229	trmu	100	67.788	ENSMUSG00000022386	Trmu	85	80.952	Mus_musculus
ENSMMOG00000007229	trmu	100	67.548	MGP_PahariEiJ_G0020139	Trmu	85	80.952	Mus_pahari
ENSMMOG00000007229	trmu	100	67.788	MGP_SPRETEiJ_G0021031	Trmu	85	80.952	Mus_spretus
ENSMMOG00000007229	trmu	99	67.470	ENSMPUG00000002523	TRMU	97	67.470	Mustela_putorius_furo
ENSMMOG00000007229	trmu	97	70.223	ENSNGAG00000005132	Trmu	97	70.223	Nannospalax_galili
ENSMMOG00000007229	trmu	100	82.692	ENSNBRG00000022690	trmu	100	82.692	Neolamprologus_brichardi
ENSMMOG00000007229	trmu	99	69.249	ENSNLEG00000015773	TRMU	98	69.249	Nomascus_leucogenys
ENSMMOG00000007229	trmu	79	58.104	ENSMEUG00000000216	TRMU	99	58.104	Notamacropus_eugenii
ENSMMOG00000007229	trmu	97	70.223	ENSODEG00000014745	TRMU	97	69.877	Octodon_degus
ENSMMOG00000007229	trmu	100	83.413	ENSONIG00000009821	trmu	100	83.413	Oreochromis_niloticus
ENSMMOG00000007229	trmu	92	66.581	ENSOANG00000001891	TRMU	98	66.581	Ornithorhynchus_anatinus
ENSMMOG00000007229	trmu	90	68.883	ENSOCUG00000003664	TRMU	94	67.766	Oryctolagus_cuniculus
ENSMMOG00000007229	trmu	99	78.313	ENSORLG00000019015	trmu	99	78.313	Oryzias_latipes
ENSMMOG00000007229	trmu	99	78.554	ENSORLG00020006830	trmu	99	78.554	Oryzias_latipes_hni
ENSMMOG00000007229	trmu	99	78.554	ENSORLG00015003907	trmu	99	78.554	Oryzias_latipes_hsok
ENSMMOG00000007229	trmu	61	74.231	ENSOMEG00000015541	trmu	94	74.231	Oryzias_melastigma
ENSMMOG00000007229	trmu	97	68.642	ENSOGAG00000008096	TRMU	97	68.642	Otolemur_garnettii
ENSMMOG00000007229	trmu	86	69.209	ENSOARG00000019475	TRMU	86	69.209	Ovis_aries
ENSMMOG00000007229	trmu	97	70.471	ENSPPAG00000033944	TRMU	83	85.366	Pan_paniscus
ENSMMOG00000007229	trmu	96	70.426	ENSPPRG00000004197	TRMU	95	70.426	Panthera_pardus
ENSMMOG00000007229	trmu	67	72.202	ENSPTIG00000014122	TRMU	97	73.864	Panthera_tigris_altaica
ENSMMOG00000007229	trmu	97	70.471	ENSPTRG00000014510	TRMU	83	85.366	Pan_troglodytes
ENSMMOG00000007229	trmu	99	67.883	ENSPANG00000023074	TRMU	91	70.930	Papio_anubis
ENSMMOG00000007229	trmu	99	74.638	ENSPKIG00000002849	trmu	100	74.638	Paramormyrops_kingsleyae
ENSMMOG00000007229	trmu	87	72.253	ENSPSIG00000013020	TRMU	95	72.253	Pelodiscus_sinensis
ENSMMOG00000007229	trmu	99	79.277	ENSPMGG00000004083	trmu	100	79.277	Periophthalmus_magnuspinnatus
ENSMMOG00000007229	trmu	96	69.173	ENSPEMG00000014007	Trmu	96	69.173	Peromyscus_maniculatus_bairdii
ENSMMOG00000007229	trmu	94	67.176	ENSPCIG00000009923	TRMU	93	67.003	Phascolarctos_cinereus
ENSMMOG00000007229	trmu	97	79.901	ENSPFOG00000008197	trmu	90	79.901	Poecilia_formosa
ENSMMOG00000007229	trmu	99	83.535	ENSPLAG00000008414	trmu	99	83.535	Poecilia_latipinna
ENSMMOG00000007229	trmu	100	83.173	ENSPMEG00000004326	trmu	100	83.173	Poecilia_mexicana
ENSMMOG00000007229	trmu	99	84.019	ENSPREG00000007980	trmu	99	84.019	Poecilia_reticulata
ENSMMOG00000007229	trmu	97	70.720	ENSPPYG00000011949	TRMU	96	70.720	Pongo_abelii
ENSMMOG00000007229	trmu	90	62.133	ENSPCAG00000013462	TRMU	96	62.133	Procavia_capensis
ENSMMOG00000007229	trmu	97	68.983	ENSPCOG00000016539	TRMU	97	68.983	Propithecus_coquereli
ENSMMOG00000007229	trmu	96	63.409	ENSPVAG00000013202	TRMU	97	63.027	Pteropus_vampyrus
ENSMMOG00000007229	trmu	100	82.692	ENSPNYG00000005629	trmu	100	82.692	Pundamilia_nyererei
ENSMMOG00000007229	trmu	98	77.995	ENSPNAG00000006339	trmu	96	77.995	Pygocentrus_nattereri
ENSMMOG00000007229	trmu	97	68.734	ENSRNOG00000016465	Trmu	97	68.734	Rattus_norvegicus
ENSMMOG00000007229	trmu	99	67.797	ENSRBIG00000038973	TRMU	98	67.797	Rhinopithecus_bieti
ENSMMOG00000007229	trmu	99	68.039	ENSRROG00000004267	TRMU	98	68.039	Rhinopithecus_roxellana
ENSMMOG00000007229	trmu	92	31.695	YDL033C	SLM3	92	31.695	Saccharomyces_cerevisiae
ENSMMOG00000007229	trmu	99	67.788	ENSSBOG00000030184	TRMU	99	67.788	Saimiri_boliviensis_boliviensis
ENSMMOG00000007229	trmu	88	75.815	ENSSFOG00015020664	trmu	97	75.815	Scleropages_formosus
ENSMMOG00000007229	trmu	100	83.173	ENSSMAG00000019450	trmu	100	83.173	Scophthalmus_maximus
ENSMMOG00000007229	trmu	100	83.894	ENSSDUG00000011913	trmu	100	83.894	Seriola_dumerili
ENSMMOG00000007229	trmu	100	83.654	ENSSLDG00000011684	trmu	100	83.654	Seriola_lalandi_dorsalis
ENSMMOG00000007229	trmu	95	62.308	ENSSPUG00000017123	TRMU	93	62.308	Sphenodon_punctatus
ENSMMOG00000007229	trmu	100	79.567	ENSSPAG00000021875	trmu	100	79.567	Stegastes_partitus
ENSMMOG00000007229	trmu	97	69.479	ENSSSCG00000000007	TRMU	96	69.479	Sus_scrofa
ENSMMOG00000007229	trmu	89	72.922	ENSTGUG00000003663	-	100	72.922	Taeniopygia_guttata
ENSMMOG00000007229	trmu	99	82.892	ENSTRUG00000001231	trmu	100	82.892	Takifugu_rubripes
ENSMMOG00000007229	trmu	99	83.693	ENSTNIG00000010484	trmu	98	83.693	Tetraodon_nigroviridis
ENSMMOG00000007229	trmu	72	57.143	ENSTBEG00000011276	-	77	57.143	Tupaia_belangeri
ENSMMOG00000007229	trmu	96	70.175	ENSTTRG00000004160	TRMU	95	70.175	Tursiops_truncatus
ENSMMOG00000007229	trmu	70	73.883	ENSUAMG00000024825	TRMU	97	73.883	Ursus_americanus
ENSMMOG00000007229	trmu	95	60.825	ENSUMAG00000019079	TRMU	97	73.152	Ursus_maritimus
ENSMMOG00000007229	trmu	53	62.557	ENSVPAG00000000685	-	100	62.557	Vicugna_pacos
ENSMMOG00000007229	trmu	99	67.711	ENSVVUG00000024963	TRMU	97	67.711	Vulpes_vulpes
ENSMMOG00000007229	trmu	99	71.667	ENSXETG00000023304	trmu	99	71.667	Xenopus_tropicalis
ENSMMOG00000007229	trmu	99	81.731	ENSXCOG00000015105	trmu	99	81.731	Xiphophorus_couchianus
ENSMMOG00000007229	trmu	99	84.019	ENSXMAG00000006697	trmu	99	84.019	Xiphophorus_maculatus