EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000007537 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: HUPF1|KIAA0221|NORF1|RENT1|pNORF1|smg-2
Full Name: -
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 11934 bases
Position: chrKV751319.1:4997155-5009088
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000009727	UPF1_Zn_bind	PF09416.10	7.6e-75	1	1
ENSMMOP00000009727	ResIII	PF04851.15	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000009898	-	3075	-	ENSMMOP00000009727	1024 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000007537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000007537's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000007537	-	99	90.385	ENSMMOG00000007881	upf1	95	90.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000007537	-	99	92.610	ENSG00000005007	UPF1	93	92.514	Homo_sapiens
ENSMMOG00000007537	-	99	96.842	ENSAPOG00000010916	-	95	96.842	Acanthochromis_polyacanthus
ENSMMOG00000007537	-	99	90.476	ENSAPOG00000023773	upf1	95	90.476	Acanthochromis_polyacanthus
ENSMMOG00000007537	-	100	91.399	ENSAMEG00000011474	UPF1	94	91.304	Ailuropoda_melanoleuca
ENSMMOG00000007537	-	98	96.008	ENSACIG00000010985	-	100	96.008	Amphilophus_citrinellus
ENSMMOG00000007537	-	99	90.718	ENSACIG00000019949	upf1	95	90.718	Amphilophus_citrinellus
ENSMMOG00000007537	-	99	89.952	ENSAOCG00000018519	upf1	95	90.472	Amphiprion_ocellaris
ENSMMOG00000007537	-	99	96.555	ENSAOCG00000006352	-	100	93.866	Amphiprion_ocellaris
ENSMMOG00000007537	-	99	96.459	ENSAPEG00000006292	-	100	93.768	Amphiprion_percula
ENSMMOG00000007537	-	99	89.952	ENSAPEG00000016344	upf1	95	90.472	Amphiprion_percula
ENSMMOG00000007537	-	99	88.764	ENSATEG00000017867	upf1	95	89.831	Anabas_testudineus
ENSMMOG00000007537	-	99	96.651	ENSATEG00000016606	-	95	96.651	Anabas_testudineus
ENSMMOG00000007537	-	99	91.761	ENSAPLG00000009175	UPF1	100	91.667	Anas_platyrhynchos
ENSMMOG00000007537	-	99	90.313	ENSANAG00000024107	UPF1	95	90.218	Aotus_nancymaae
ENSMMOG00000007537	-	99	90.526	ENSACLG00000007181	upf1	95	90.526	Astatotilapia_calliptera
ENSMMOG00000007537	-	99	95.889	ENSACLG00000022630	-	95	95.889	Astatotilapia_calliptera
ENSMMOG00000007537	-	99	92.359	ENSAMXG00000042187	upf1	95	92.550	Astyanax_mexicanus
ENSMMOG00000007537	-	99	91.667	ENSBTAG00000020922	UPF1	94	91.572	Bos_taurus
ENSMMOG00000007537	-	97	49.854	WBGene00004880	smg-2	95	49.854	Caenorhabditis_elegans
ENSMMOG00000007537	-	99	91.643	ENSCJAG00000019627	UPF1	93	91.548	Callithrix_jacchus
ENSMMOG00000007537	-	99	91.667	ENSCAFG00000014578	UPF1	93	91.572	Canis_familiaris
ENSMMOG00000007537	-	99	92.632	ENSCAFG00020012347	UPF1	93	92.536	Canis_lupus_dingo
ENSMMOG00000007537	-	99	92.632	ENSCHIG00000011018	UPF1	94	91.564	Capra_hircus
ENSMMOG00000007537	-	99	91.453	ENSTSYG00000008877	UPF1	98	91.358	Carlito_syrichta
ENSMMOG00000007537	-	99	91.358	ENSCAPG00000005758	UPF1	95	91.263	Cavia_aperea
ENSMMOG00000007537	-	99	91.012	ENSCPOG00000025463	UPF1	95	90.918	Cavia_porcellus
ENSMMOG00000007537	-	99	92.610	ENSCCAG00000032175	UPF1	94	91.548	Cebus_capucinus
ENSMMOG00000007537	-	99	91.889	ENSCATG00000040306	UPF1	97	91.794	Cercocebus_atys
ENSMMOG00000007537	-	99	91.643	ENSCLAG00000004037	UPF1	99	91.548	Chinchilla_lanigera
ENSMMOG00000007537	-	99	92.610	ENSCSAG00000005276	UPF1	93	92.514	Chlorocebus_sabaeus
ENSMMOG00000007537	-	99	92.176	ENSCPBG00000012513	UPF1	94	92.080	Chrysemys_picta_bellii
ENSMMOG00000007537	-	75	83.029	ENSCING00000021399	-	91	83.029	Ciona_intestinalis
ENSMMOG00000007537	-	99	74.398	ENSCSAVG00000006533	-	94	73.967	Ciona_savignyi
ENSMMOG00000007537	-	99	91.643	ENSCANG00000029819	UPF1	97	91.548	Colobus_angolensis_palliatus
ENSMMOG00000007537	-	99	92.322	ENSCGRG00001021067	Upf1	93	92.226	Cricetulus_griseus_chok1gshd
ENSMMOG00000007537	-	99	91.358	ENSCGRG00000013480	Upf1	98	91.263	Cricetulus_griseus_crigri
ENSMMOG00000007537	-	99	85.291	ENSCSEG00000017239	upf1	95	85.048	Cynoglossus_semilaevis
ENSMMOG00000007537	-	99	95.885	ENSCSEG00000016159	-	95	95.885	Cynoglossus_semilaevis
ENSMMOG00000007537	-	99	95.885	ENSCVAG00000010561	upf1	95	95.885	Cyprinodon_variegatus
ENSMMOG00000007537	-	99	91.786	ENSDARG00000016302	upf1	95	92.073	Danio_rerio
ENSMMOG00000007537	-	99	89.215	ENSDORG00000009984	Upf1	95	89.120	Dipodomys_ordii
ENSMMOG00000007537	-	83	72.178	FBgn0030354	Upf1	75	71.685	Drosophila_melanogaster
ENSMMOG00000007537	-	53	89.483	ENSEBUG00000010069	upf1	89	89.483	Eptatretus_burgeri
ENSMMOG00000007537	-	99	92.536	ENSEASG00005006549	UPF1	93	92.440	Equus_asinus_asinus
ENSMMOG00000007537	-	99	92.536	ENSECAG00000010639	UPF1	93	92.440	Equus_caballus
ENSMMOG00000007537	-	99	92.688	ENSELUG00000012916	-	95	92.688	Esox_lucius
ENSMMOG00000007537	-	99	90.114	ENSELUG00000020917	upf1	95	90.114	Esox_lucius
ENSMMOG00000007537	-	99	91.572	ENSFCAG00000009757	UPF1	93	91.477	Felis_catus
ENSMMOG00000007537	-	99	92.286	ENSFALG00000009312	UPF1	96	92.190	Ficedula_albicollis
ENSMMOG00000007537	-	99	91.548	ENSFDAG00000014816	UPF1	99	91.453	Fukomys_damarensis
ENSMMOG00000007537	-	99	87.773	ENSFHEG00000006428	upf1	94	87.311	Fundulus_heteroclitus
ENSMMOG00000007537	-	91	97.015	ENSFHEG00000016276	-	96	97.015	Fundulus_heteroclitus
ENSMMOG00000007537	-	99	92.337	ENSGMOG00000007541	upf1	95	92.337	Gadus_morhua
ENSMMOG00000007537	-	99	92.727	ENSGALG00000003220	UPF1	93	92.632	Gallus_gallus
ENSMMOG00000007537	-	65	91.210	ENSGAFG00000015443	-	88	89.326	Gambusia_affinis
ENSMMOG00000007537	-	99	95.789	ENSGAFG00000004831	upf1	95	95.789	Gambusia_affinis
ENSMMOG00000007537	-	99	92.536	ENSGAGG00000022217	UPF1	94	92.440	Gopherus_agassizii
ENSMMOG00000007537	-	100	92.359	ENSGGOG00000002608	UPF1	99	92.264	Gorilla_gorilla
ENSMMOG00000007537	-	85	85.057	ENSHBUG00000014694	upf1	90	85.057	Haplochromis_burtoni
ENSMMOG00000007537	-	85	97.436	ENSHBUG00000008939	upf1	89	97.436	Haplochromis_burtoni
ENSMMOG00000007537	-	99	91.358	ENSHGLG00000010900	UPF1	93	91.263	Heterocephalus_glaber_female
ENSMMOG00000007537	-	99	92.575	ENSHGLG00100005904	UPF1	96	92.478	Heterocephalus_glaber_male
ENSMMOG00000007537	-	99	95.507	ENSHCOG00000008918	upf1	100	94.879	Hippocampus_comes
ENSMMOG00000007537	-	99	92.455	ENSIPUG00000005108	UPF1	95	92.646	Ictalurus_punctatus
ENSMMOG00000007537	-	99	92.610	ENSSTOG00000009196	UPF1	94	91.548	Ictidomys_tridecemlineatus
ENSMMOG00000007537	-	99	91.073	ENSJJAG00000023151	Upf1	94	90.978	Jaculus_jaculus
ENSMMOG00000007537	-	99	96.172	ENSKMAG00000004962	upf1	95	96.172	Kryptolebias_marmoratus
ENSMMOG00000007537	-	99	96.367	ENSLBEG00000027848	-	95	96.367	Labrus_bergylta
ENSMMOG00000007537	-	99	89.340	ENSLBEG00000014862	upf1	95	90.000	Labrus_bergylta
ENSMMOG00000007537	-	66	91.404	ENSLACG00000008482	UPF1	100	91.404	Latimeria_chalumnae
ENSMMOG00000007537	-	99	93.397	ENSLOCG00000002072	upf1	95	93.397	Lepisosteus_oculatus
ENSMMOG00000007537	-	99	91.004	ENSLAFG00000014963	UPF1	93	90.909	Loxodonta_africana
ENSMMOG00000007537	-	99	91.643	ENSMFAG00000037748	UPF1	94	91.548	Macaca_fascicularis
ENSMMOG00000007537	-	99	91.643	ENSMMUG00000023286	UPF1	94	91.548	Macaca_mulatta
ENSMMOG00000007537	-	99	91.643	ENSMNEG00000000046	UPF1	94	91.548	Macaca_nemestrina
ENSMMOG00000007537	-	99	91.643	ENSMLEG00000028404	UPF1	99	91.548	Mandrillus_leucophaeus
ENSMMOG00000007537	-	99	89.642	ENSMAMG00000006229	upf1	95	90.301	Mastacembelus_armatus
ENSMMOG00000007537	-	99	96.176	ENSMAMG00000006231	-	95	96.176	Mastacembelus_armatus
ENSMMOG00000007537	-	99	89.499	ENSMZEG00005003489	upf1	95	89.782	Maylandia_zebra
ENSMMOG00000007537	-	99	95.889	ENSMZEG00005016386	-	95	95.889	Maylandia_zebra
ENSMMOG00000007537	-	99	91.366	ENSMGAG00000004745	UPF1	100	91.271	Meleagris_gallopavo
ENSMMOG00000007537	-	99	91.358	ENSMAUG00000011398	Upf1	95	91.263	Mesocricetus_auratus
ENSMMOG00000007537	-	99	92.514	ENSMICG00000001659	UPF1	93	92.418	Microcebus_murinus
ENSMMOG00000007537	-	99	91.358	ENSMOCG00000005699	Upf1	94	91.263	Microtus_ochrogaster
ENSMMOG00000007537	-	99	92.720	ENSMODG00000003689	UPF1	95	92.625	Monodelphis_domestica
ENSMMOG00000007537	-	99	89.856	ENSMALG00000000144	upf1	95	89.790	Monopterus_albus
ENSMMOG00000007537	-	99	94.948	ENSMALG00000018100	-	95	94.948	Monopterus_albus
ENSMMOG00000007537	-	99	92.226	MGP_CAROLIEiJ_G0031142	Upf1	94	91.168	Mus_caroli
ENSMMOG00000007537	-	99	92.226	ENSMUSG00000058301	Upf1	94	91.168	Mus_musculus
ENSMMOG00000007537	-	99	92.226	MGP_PahariEiJ_G0021607	Upf1	94	91.168	Mus_pahari
ENSMMOG00000007537	-	99	92.226	MGP_SPRETEiJ_G0032260	Upf1	94	91.168	Mus_spretus
ENSMMOG00000007537	-	99	92.632	ENSMPUG00000015516	UPF1	93	92.536	Mustela_putorius_furo
ENSMMOG00000007537	-	99	92.352	ENSMLUG00000012122	UPF1	93	92.256	Myotis_lucifugus
ENSMMOG00000007537	-	99	91.073	ENSNGAG00000024107	Upf1	93	90.978	Nannospalax_galili
ENSMMOG00000007537	-	98	95.049	ENSNBRG00000022069	-	100	95.049	Neolamprologus_brichardi
ENSMMOG00000007537	-	99	88.612	ENSNBRG00000000670	upf1	95	88.612	Neolamprologus_brichardi
ENSMMOG00000007537	-	99	85.850	ENSNLEG00000006062	UPF1	99	85.755	Nomascus_leucogenys
ENSMMOG00000007537	-	82	84.766	ENSMEUG00000014146	-	77	84.570	Notamacropus_eugenii
ENSMMOG00000007537	-	99	85.509	ENSOPRG00000014018	UPF1	99	85.413	Ochotona_princeps
ENSMMOG00000007537	-	99	91.794	ENSODEG00000012426	UPF1	95	91.453	Octodon_degus
ENSMMOG00000007537	-	99	95.985	ENSONIG00000012729	-	95	95.985	Oreochromis_niloticus
ENSMMOG00000007537	-	99	89.688	ENSONIG00000010452	upf1	95	89.972	Oreochromis_niloticus
ENSMMOG00000007537	-	99	91.107	ENSOANG00000004568	UPF1	94	90.113	Ornithorhynchus_anatinus
ENSMMOG00000007537	-	99	95.502	ENSORLG00000008453	upf1	95	95.502	Oryzias_latipes
ENSMMOG00000007537	-	99	95.502	ENSORLG00020014758	upf1	95	95.502	Oryzias_latipes_hni
ENSMMOG00000007537	-	99	95.502	ENSORLG00015010165	upf1	100	90.847	Oryzias_latipes_hsok
ENSMMOG00000007537	-	99	95.598	ENSOMEG00000003665	upf1	95	95.598	Oryzias_melastigma
ENSMMOG00000007537	-	99	92.706	ENSOGAG00000012866	UPF1	93	92.610	Otolemur_garnettii
ENSMMOG00000007537	-	96	91.159	ENSOARG00000010739	UPF1	94	91.061	Ovis_aries
ENSMMOG00000007537	-	99	91.643	ENSPPAG00000043884	UPF1	96	91.548	Pan_paniscus
ENSMMOG00000007537	-	99	91.572	ENSPPRG00000023470	UPF1	93	91.477	Panthera_pardus
ENSMMOG00000007537	-	99	93.659	ENSPTIG00000010159	UPF1	99	93.561	Panthera_tigris_altaica
ENSMMOG00000007537	-	99	91.643	ENSPTRG00000010721	UPF1	94	91.548	Pan_troglodytes
ENSMMOG00000007537	-	99	91.643	ENSPANG00000008847	UPF1	94	91.548	Papio_anubis
ENSMMOG00000007537	-	91	92.542	ENSPKIG00000006069	upf1	90	93.490	Paramormyrops_kingsleyae
ENSMMOG00000007537	-	73	92.105	ENSPSIG00000009491	UPF1	100	91.974	Pelodiscus_sinensis
ENSMMOG00000007537	-	99	89.037	ENSPMGG00000017327	upf1	95	89.133	Periophthalmus_magnuspinnatus
ENSMMOG00000007537	-	99	91.358	ENSPEMG00000001085	Upf1	94	91.263	Peromyscus_maniculatus_bairdii
ENSMMOG00000007537	-	99	87.238	ENSPMAG00000001206	upf1	95	86.762	Petromyzon_marinus
ENSMMOG00000007537	-	99	92.727	ENSPCIG00000006156	UPF1	93	92.632	Phascolarctos_cinereus
ENSMMOG00000007537	-	99	88.910	ENSPLAG00000018155	-	95	88.436	Poecilia_latipinna
ENSMMOG00000007537	-	99	95.885	ENSPLAG00000016232	-	95	95.885	Poecilia_latipinna
ENSMMOG00000007537	-	99	89.494	ENSPMEG00000011443	-	95	88.995	Poecilia_mexicana
ENSMMOG00000007537	-	99	95.793	ENSPMEG00000016319	-	95	95.793	Poecilia_mexicana
ENSMMOG00000007537	-	99	89.479	ENSPREG00000009940	upf1	95	89.005	Poecilia_reticulata
ENSMMOG00000007537	-	99	95.598	ENSPREG00000011247	-	95	95.598	Poecilia_reticulata
ENSMMOG00000007537	-	99	86.515	ENSPPYG00000009752	UPF1	93	86.515	Pongo_abelii
ENSMMOG00000007537	-	71	98.467	ENSPCAG00000012962	UPF1	65	98.467	Procavia_capensis
ENSMMOG00000007537	-	99	91.738	ENSPCOG00000023813	UPF1	94	91.643	Propithecus_coquereli
ENSMMOG00000007537	-	67	97.436	ENSPVAG00000003183	UPF1	62	97.436	Pteropus_vampyrus
ENSMMOG00000007537	-	99	95.793	ENSPNYG00000016731	-	95	95.793	Pundamilia_nyererei
ENSMMOG00000007537	-	99	89.499	ENSPNYG00000003694	upf1	95	89.782	Pundamilia_nyererei
ENSMMOG00000007537	-	99	91.882	ENSPNAG00000025614	upf1	95	92.073	Pygocentrus_nattereri
ENSMMOG00000007537	-	99	92.226	ENSRNOG00000020134	Upf1	94	91.168	Rattus_norvegicus
ENSMMOG00000007537	-	99	89.269	ENSRBIG00000013894	UPF1	98	92.131	Rhinopithecus_bieti
ENSMMOG00000007537	-	99	91.643	ENSRROG00000040935	UPF1	98	92.131	Rhinopithecus_roxellana
ENSMMOG00000007537	-	78	56.473	YMR080C	NAM7	83	56.473	Saccharomyces_cerevisiae
ENSMMOG00000007537	-	99	91.889	ENSSBOG00000023632	UPF1	96	91.794	Saimiri_boliviensis_boliviensis
ENSMMOG00000007537	-	99	91.659	ENSSHAG00000010499	UPF1	100	91.564	Sarcophilus_harrisii
ENSMMOG00000007537	-	99	93.212	ENSSFOG00015021095	upf1	100	93.117	Scleropages_formosus
ENSMMOG00000007537	-	99	96.463	ENSSMAG00000021018	-	95	96.463	Scophthalmus_maximus
ENSMMOG00000007537	-	99	88.774	ENSSMAG00000005055	upf1	95	89.528	Scophthalmus_maximus
ENSMMOG00000007537	-	99	89.266	ENSSDUG00000013320	upf1	95	90.019	Seriola_dumerili
ENSMMOG00000007537	-	99	96.750	ENSSDUG00000009629	-	95	96.750	Seriola_dumerili
ENSMMOG00000007537	-	99	90.114	ENSSLDG00000020868	upf1	95	90.494	Seriola_lalandi_dorsalis
ENSMMOG00000007537	-	99	96.750	ENSSLDG00000006878	-	95	96.750	Seriola_lalandi_dorsalis
ENSMMOG00000007537	-	99	92.536	ENSSPUG00000010538	UPF1	94	92.440	Sphenodon_punctatus
ENSMMOG00000007537	-	99	88.359	ENSSPAG00000000003	upf1	95	88.230	Stegastes_partitus
ENSMMOG00000007537	-	99	96.364	ENSSPAG00000011521	-	95	96.364	Stegastes_partitus
ENSMMOG00000007537	-	99	92.536	ENSSSCG00000039301	UPF1	99	92.433	Sus_scrofa
ENSMMOG00000007537	-	81	86.374	ENSTGUG00000001057	UPF1	89	94.684	Taeniopygia_guttata
ENSMMOG00000007537	-	99	90.344	ENSTRUG00000000150	upf1	95	90.153	Takifugu_rubripes
ENSMMOG00000007537	-	99	95.120	ENSTRUG00000005131	-	95	95.120	Takifugu_rubripes
ENSMMOG00000007537	-	99	88.517	ENSTTRG00000011544	UPF1	93	88.421	Tursiops_truncatus
ENSMMOG00000007537	-	99	92.536	ENSUAMG00000007093	UPF1	93	92.440	Ursus_americanus
ENSMMOG00000007537	-	99	92.529	ENSUMAG00000006652	UPF1	99	92.857	Ursus_maritimus
ENSMMOG00000007537	-	99	92.632	ENSVVUG00000007797	UPF1	93	92.536	Vulpes_vulpes
ENSMMOG00000007537	-	99	82.302	ENSXETG00000013602	upf1	93	82.302	Xenopus_tropicalis
ENSMMOG00000007537	-	99	95.736	ENSXCOG00000005764	-	100	95.736	Xiphophorus_couchianus
ENSMMOG00000007537	-	96	88.988	ENSXCOG00000015275	-	91	88.988	Xiphophorus_couchianus
ENSMMOG00000007537	-	99	89.187	ENSXMAG00000001703	-	95	89.187	Xiphophorus_maculatus
ENSMMOG00000007537	-	99	95.602	ENSXMAG00000002540	-	95	95.602	Xiphophorus_maculatus