EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000008553 (Gene tree)
Gene ID: -
Gene Symbol: ncl
Alias: fa12d03|wu:fa12d03|zgc:152810
Full Name: nucleolin
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 3638 bases
Position: chrKV751319.1:7012190-7015827
Accession: ZDB-GENE-030131-6986
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000011087	RRM_1	PF00076.22	2.1e-58	1	4
ENSMMOP00000011087	RRM_1	PF00076.22	2.1e-58	2	4
ENSMMOP00000011087	RRM_1	PF00076.22	2.1e-58	3	4
ENSMMOP00000011087	RRM_1	PF00076.22	2.1e-58	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000011279	-	1113	-	ENSMMOP00000011087	370 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000008553's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000008553's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000008553	ncl	87	30.088	ENSMMOG00000018044	pabpc1a	59	30.303
ENSMMOG00000008553	ncl	91	39.143	ENSMMOG00000018095	-	72	41.401

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000008553	ncl	84	90.523	ENSAPOG00000023888	ncl	52	90.523	Acanthochromis_polyacanthus
ENSMMOG00000008553	ncl	91	41.573	ENSAPOG00000014534	-	55	41.486	Acanthochromis_polyacanthus
ENSMMOG00000008553	ncl	85	82.278	ENSACIG00000013234	ncl	53	81.013	Amphilophus_citrinellus
ENSMMOG00000008553	ncl	84	90.196	ENSAOCG00000003133	ncl	53	87.059	Amphiprion_ocellaris
ENSMMOG00000008553	ncl	90	39.548	ENSAOCG00000014792	-	50	40.557	Amphiprion_ocellaris
ENSMMOG00000008553	ncl	90	39.831	ENSAPEG00000013612	-	50	40.867	Amphiprion_percula
ENSMMOG00000008553	ncl	84	90.196	ENSAPEG00000002769	ncl	53	87.059	Amphiprion_percula
ENSMMOG00000008553	ncl	93	43.089	ENSATEG00000019862	-	67	42.901	Anabas_testudineus
ENSMMOG00000008553	ncl	87	58.610	ENSAPLG00000012897	-	60	60.645	Anas_platyrhynchos
ENSMMOG00000008553	ncl	85	77.918	ENSACLG00000026031	ncl	86	76.656	Astatotilapia_calliptera
ENSMMOG00000008553	ncl	82	72.459	ENSAMXG00000001647	ncl	82	69.937	Astyanax_mexicanus
ENSMMOG00000008553	ncl	81	42.395	ENSCHIG00000012665	-	51	42.444	Capra_hircus
ENSMMOG00000008553	ncl	82	49.099	ENSCHIG00000003401	-	52	48.444	Capra_hircus
ENSMMOG00000008553	ncl	85	83.861	ENSCSEG00000015089	ncl	57	83.861	Cynoglossus_semilaevis
ENSMMOG00000008553	ncl	84	76.721	ENSDARG00000002710	ncl	82	76.415	Danio_rerio
ENSMMOG00000008553	ncl	82	48.693	ENSDNOG00000040257	-	50	47.712	Dasypus_novemcinctus
ENSMMOG00000008553	ncl	89	44.144	ENSDNOG00000031611	-	68	46.053	Dasypus_novemcinctus
ENSMMOG00000008553	ncl	63	53.020	ENSDNOG00000040440	-	96	52.778	Dasypus_novemcinctus
ENSMMOG00000008553	ncl	95	50.000	ENSELUG00000022826	-	75	50.649	Esox_lucius
ENSMMOG00000008553	ncl	82	72.903	ENSELUG00000006033	ncl	51	72.632	Esox_lucius
ENSMMOG00000008553	ncl	86	77.987	ENSFHEG00000018000	ncl	63	75.350	Fundulus_heteroclitus
ENSMMOG00000008553	ncl	84	71.613	ENSGMOG00000001341	ncl	54	70.297	Gadus_morhua
ENSMMOG00000008553	ncl	82	80.645	ENSGACG00000008970	ncl	59	79.479	Gasterosteus_aculeatus
ENSMMOG00000008553	ncl	83	82.051	ENSHBUG00000006869	ncl	57	78.338	Haplochromis_burtoni
ENSMMOG00000008553	ncl	84	74.441	ENSIPUG00000024556	ncl	80	73.482	Ictalurus_punctatus
ENSMMOG00000008553	ncl	86	42.308	ENSLBEG00000014278	-	72	42.857	Labrus_bergylta
ENSMMOG00000008553	ncl	86	42.941	ENSLBEG00000007915	-	54	42.857	Labrus_bergylta
ENSMMOG00000008553	ncl	85	89.423	ENSLBEG00000019073	ncl	52	89.423	Labrus_bergylta
ENSMMOG00000008553	ncl	89	68.343	ENSLACG00000009328	ncl	50	70.000	Latimeria_chalumnae
ENSMMOG00000008553	ncl	81	55.049	ENSLACG00000022167	-	65	54.902	Latimeria_chalumnae
ENSMMOG00000008553	ncl	89	40.974	ENSMAMG00000003479	-	58	40.498	Mastacembelus_armatus
ENSMMOG00000008553	ncl	83	82.051	ENSMZEG00005017438	ncl	53	80.769	Maylandia_zebra
ENSMMOG00000008553	ncl	82	62.581	ENSMGAG00000008147	-	78	62.667	Meleagris_gallopavo
ENSMMOG00000008553	ncl	82	59.236	ENSMODG00000002470	-	51	58.282	Monodelphis_domestica
ENSMMOG00000008553	ncl	90	80.392	ENSMALG00000014827	ncl	50	85.816	Monopterus_albus
ENSMMOG00000008553	ncl	83	43.284	ENSMPUG00000001663	-	58	43.284	Mustela_putorius_furo
ENSMMOG00000008553	ncl	77	81.597	ENSNBRG00000000146	-	84	80.208	Neolamprologus_brichardi
ENSMMOG00000008553	ncl	77	81.597	ENSNBRG00000001232	ncl	85	79.344	Neolamprologus_brichardi
ENSMMOG00000008553	ncl	85	60.261	ENSMEUG00000012335	-	51	59.248	Notamacropus_eugenii
ENSMMOG00000008553	ncl	84	36.825	ENSONIG00000010631	-	89	33.974	Oreochromis_niloticus
ENSMMOG00000008553	ncl	83	82.051	ENSONIG00000012508	ncl	56	78.338	Oreochromis_niloticus
ENSMMOG00000008553	ncl	87	63.208	ENSOANG00000008732	-	56	63.141	Ornithorhynchus_anatinus
ENSMMOG00000008553	ncl	84	84.295	ENSORLG00000007055	ncl	54	84.295	Oryzias_latipes
ENSMMOG00000008553	ncl	86	37.538	ENSORLG00000004645	-	69	38.125	Oryzias_latipes
ENSMMOG00000008553	ncl	86	37.538	ENSORLG00020003497	-	62	38.125	Oryzias_latipes_hni
ENSMMOG00000008553	ncl	85	84.127	ENSORLG00015013815	ncl	88	84.127	Oryzias_latipes_hsok
ENSMMOG00000008553	ncl	86	37.838	ENSORLG00015006613	-	64	38.750	Oryzias_latipes_hsok
ENSMMOG00000008553	ncl	87	37.982	ENSOMEG00000015864	-	68	38.679	Oryzias_melastigma
ENSMMOG00000008553	ncl	85	78.827	ENSPKIG00000002604	ncl	52	78.689	Paramormyrops_kingsleyae
ENSMMOG00000008553	ncl	85	63.259	ENSPSIG00000002361	-	54	63.141	Pelodiscus_sinensis
ENSMMOG00000008553	ncl	84	78.275	ENSPMGG00000004709	ncl	81	76.358	Periophthalmus_magnuspinnatus
ENSMMOG00000008553	ncl	86	58.917	ENSPCIG00000003293	-	50	58.861	Phascolarctos_cinereus
ENSMMOG00000008553	ncl	83	82.372	ENSPLAG00000024026	ncl	52	79.360	Poecilia_latipinna
ENSMMOG00000008553	ncl	83	82.051	ENSPNYG00000020494	ncl	53	80.769	Pundamilia_nyererei
ENSMMOG00000008553	ncl	85	55.806	ENSSHAG00000002702	-	54	55.949	Sarcophilus_harrisii
ENSMMOG00000008553	ncl	88	77.879	ENSSFOG00015008583	ncl	57	79.153	Scleropages_formosus
ENSMMOG00000008553	ncl	86	46.584	ENSSFOG00015013153	-	76	46.580	Scleropages_formosus
ENSMMOG00000008553	ncl	84	86.792	ENSSMAG00000021241	ncl	51	86.834	Scophthalmus_maximus
ENSMMOG00000008553	ncl	84	42.683	ENSSMAG00000007582	-	51	42.902	Scophthalmus_maximus
ENSMMOG00000008553	ncl	84	43.636	ENSSDUG00000010922	-	59	43.302	Seriola_dumerili
ENSMMOG00000008553	ncl	85	90.794	ENSSDUG00000006128	ncl	86	90.794	Seriola_dumerili
ENSMMOG00000008553	ncl	85	88.715	ENSSLDG00000002012	ncl	54	89.028	Seriola_lalandi_dorsalis
ENSMMOG00000008553	ncl	84	43.293	ENSSLDG00000015784	-	54	42.947	Seriola_lalandi_dorsalis
ENSMMOG00000008553	ncl	91	43.228	ENSSPAG00000001859	-	51	43.631	Stegastes_partitus
ENSMMOG00000008553	ncl	75	89.007	ENSSPAG00000002637	ncl	89	85.804	Stegastes_partitus
ENSMMOG00000008553	ncl	84	60.436	ENSTGUG00000009782	-	50	59.190	Taeniopygia_guttata
ENSMMOG00000008553	ncl	85	88.889	ENSTRUG00000008185	ncl	51	88.889	Takifugu_rubripes
ENSMMOG00000008553	ncl	85	88.487	ENSTNIG00000012186	ncl	51	88.235	Tetraodon_nigroviridis
ENSMMOG00000008553	ncl	84	38.226	ENSXCOG00000007369	-	74	39.117	Xiphophorus_couchianus
ENSMMOG00000008553	ncl	84	64.610	ENSXCOG00000003524	ncl	85	63.462	Xiphophorus_couchianus