EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000008856 (Gene tree)
Gene ID: -
Gene Symbol: smndc1
Alias: TDRD10|spf30|wu:fb37h07|wu:fc23a07
Full Name: survival motor neuron domain containing 1
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 4450 bases
Position: chrKV751325.1:8795689-8800138
Accession: ZDB-GENE-030131-614
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000011505	SMN	PF06003.12	1.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000011702	-	717	-	ENSMMOP00000011505	238 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000008856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000008856's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000008856	smndc1	100	76.471	ENSG00000119953	SMNDC1	100	76.471	Homo_sapiens
ENSMMOG00000008856	smndc1	100	89.496	ENSAPOG00000021772	smndc1	100	89.496	Acanthochromis_polyacanthus
ENSMMOG00000008856	smndc1	100	76.050	ENSAMEG00000005251	SMNDC1	100	76.050	Ailuropoda_melanoleuca
ENSMMOG00000008856	smndc1	100	89.076	ENSACIG00000004819	smndc1	100	89.076	Amphilophus_citrinellus
ENSMMOG00000008856	smndc1	100	89.916	ENSAOCG00000017869	smndc1	100	89.916	Amphiprion_ocellaris
ENSMMOG00000008856	smndc1	100	89.916	ENSAPEG00000007752	smndc1	100	89.916	Amphiprion_percula
ENSMMOG00000008856	smndc1	100	89.076	ENSATEG00000006830	smndc1	100	89.076	Anabas_testudineus
ENSMMOG00000008856	smndc1	83	75.758	ENSAPLG00000004322	SMNDC1	100	75.758	Anas_platyrhynchos
ENSMMOG00000008856	smndc1	100	76.891	ENSACAG00000005983	SMNDC1	100	76.891	Anolis_carolinensis
ENSMMOG00000008856	smndc1	100	76.050	ENSANAG00000032875	SMNDC1	100	76.050	Aotus_nancymaae
ENSMMOG00000008856	smndc1	100	86.555	ENSACLG00000016360	smndc1	100	86.555	Astatotilapia_calliptera
ENSMMOG00000008856	smndc1	100	79.412	ENSAMXG00000020310	smndc1	100	79.412	Astyanax_mexicanus
ENSMMOG00000008856	smndc1	100	77.824	ENSBTAG00000000551	SMNDC1	100	77.824	Bos_taurus
ENSMMOG00000008856	smndc1	100	76.050	ENSCJAG00000018624	SMNDC1	100	76.050	Callithrix_jacchus
ENSMMOG00000008856	smndc1	100	76.050	ENSCAFG00000010720	SMNDC1	100	76.050	Canis_familiaris
ENSMMOG00000008856	smndc1	100	76.050	ENSCAFG00020011913	SMNDC1	100	76.050	Canis_lupus_dingo
ENSMMOG00000008856	smndc1	100	77.824	ENSCHIG00000010604	SMNDC1	100	77.824	Capra_hircus
ENSMMOG00000008856	smndc1	100	76.050	ENSTSYG00000026454	SMNDC1	100	76.050	Carlito_syrichta
ENSMMOG00000008856	smndc1	100	62.500	ENSCAPG00000009132	SMNDC1	100	72.637	Cavia_aperea
ENSMMOG00000008856	smndc1	100	76.050	ENSCPOG00000031666	SMNDC1	100	76.050	Cavia_porcellus
ENSMMOG00000008856	smndc1	100	76.050	ENSCCAG00000021793	SMNDC1	100	76.050	Cebus_capucinus
ENSMMOG00000008856	smndc1	100	75.630	ENSCATG00000035910	SMNDC1	100	75.630	Cercocebus_atys
ENSMMOG00000008856	smndc1	100	76.050	ENSCLAG00000002838	SMNDC1	100	76.050	Chinchilla_lanigera
ENSMMOG00000008856	smndc1	100	76.050	ENSCSAG00000005169	SMNDC1	100	76.050	Chlorocebus_sabaeus
ENSMMOG00000008856	smndc1	81	72.021	ENSCHOG00000002936	SMNDC1	100	72.021	Choloepus_hoffmanni
ENSMMOG00000008856	smndc1	100	76.471	ENSCPBG00000012837	SMNDC1	100	76.471	Chrysemys_picta_bellii
ENSMMOG00000008856	smndc1	100	76.050	ENSCANG00000031720	-	100	76.050	Colobus_angolensis_palliatus
ENSMMOG00000008856	smndc1	100	70.168	ENSCANG00000034620	-	100	70.168	Colobus_angolensis_palliatus
ENSMMOG00000008856	smndc1	100	60.669	ENSCANG00000036994	-	100	60.669	Colobus_angolensis_palliatus
ENSMMOG00000008856	smndc1	100	75.630	ENSCGRG00001012973	Smndc1	100	75.630	Cricetulus_griseus_chok1gshd
ENSMMOG00000008856	smndc1	100	75.630	ENSCGRG00000012396	Smndc1	100	75.630	Cricetulus_griseus_crigri
ENSMMOG00000008856	smndc1	100	83.613	ENSCSEG00000015621	smndc1	100	83.613	Cynoglossus_semilaevis
ENSMMOG00000008856	smndc1	100	86.134	ENSCVAG00000020432	smndc1	100	86.134	Cyprinodon_variegatus
ENSMMOG00000008856	smndc1	100	80.252	ENSDARG00000056235	smndc1	100	80.252	Danio_rerio
ENSMMOG00000008856	smndc1	100	76.050	ENSDNOG00000016387	SMNDC1	83	76.050	Dasypus_novemcinctus
ENSMMOG00000008856	smndc1	100	76.050	ENSDORG00000023715	Smndc1	100	76.050	Dipodomys_ordii
ENSMMOG00000008856	smndc1	95	38.956	FBgn0039977	CG17454	98	40.562	Drosophila_melanogaster
ENSMMOG00000008856	smndc1	100	65.975	ENSEBUG00000010929	smndc1	100	66.805	Eptatretus_burgeri
ENSMMOG00000008856	smndc1	100	76.050	ENSEASG00005014930	SMNDC1	100	76.050	Equus_asinus_asinus
ENSMMOG00000008856	smndc1	100	76.050	ENSECAG00000029973	SMNDC1	100	76.050	Equus_caballus
ENSMMOG00000008856	smndc1	83	53.535	ENSEEUG00000013407	-	100	53.535	Erinaceus_europaeus
ENSMMOG00000008856	smndc1	100	82.773	ENSELUG00000000227	smndc1	100	82.773	Esox_lucius
ENSMMOG00000008856	smndc1	100	76.050	ENSFCAG00000027353	SMNDC1	100	76.050	Felis_catus
ENSMMOG00000008856	smndc1	100	76.050	ENSFALG00000002306	SMNDC1	100	76.050	Ficedula_albicollis
ENSMMOG00000008856	smndc1	100	76.471	ENSFDAG00000006468	SMNDC1	100	76.471	Fukomys_damarensis
ENSMMOG00000008856	smndc1	100	89.496	ENSFHEG00000020150	smndc1	100	89.496	Fundulus_heteroclitus
ENSMMOG00000008856	smndc1	100	85.294	ENSGMOG00000016585	smndc1	100	85.294	Gadus_morhua
ENSMMOG00000008856	smndc1	100	76.050	ENSGALG00000008561	SMNDC1	100	76.050	Gallus_gallus
ENSMMOG00000008856	smndc1	100	87.395	ENSGAFG00000011582	smndc1	100	87.395	Gambusia_affinis
ENSMMOG00000008856	smndc1	100	87.815	ENSGACG00000009468	smndc1	100	87.815	Gasterosteus_aculeatus
ENSMMOG00000008856	smndc1	100	76.471	ENSGAGG00000024547	SMNDC1	100	76.471	Gopherus_agassizii
ENSMMOG00000008856	smndc1	100	76.050	ENSGGOG00000010071	SMNDC1	100	76.050	Gorilla_gorilla
ENSMMOG00000008856	smndc1	100	86.555	ENSHBUG00000017596	smndc1	100	86.555	Haplochromis_burtoni
ENSMMOG00000008856	smndc1	100	76.471	ENSHGLG00000013390	-	100	76.471	Heterocephalus_glaber_female
ENSMMOG00000008856	smndc1	100	55.102	ENSHGLG00000001157	-	100	55.102	Heterocephalus_glaber_female
ENSMMOG00000008856	smndc1	100	61.633	ENSHGLG00100004278	-	100	60.643	Heterocephalus_glaber_male
ENSMMOG00000008856	smndc1	100	76.471	ENSHGLG00100004814	-	100	76.471	Heterocephalus_glaber_male
ENSMMOG00000008856	smndc1	100	83.682	ENSHCOG00000000783	smndc1	100	83.682	Hippocampus_comes
ENSMMOG00000008856	smndc1	100	81.513	ENSIPUG00000004217	smndc1	100	81.513	Ictalurus_punctatus
ENSMMOG00000008856	smndc1	100	76.050	ENSSTOG00000006088	SMNDC1	100	76.050	Ictidomys_tridecemlineatus
ENSMMOG00000008856	smndc1	100	76.050	ENSJJAG00000019974	Smndc1	100	76.050	Jaculus_jaculus
ENSMMOG00000008856	smndc1	100	86.555	ENSKMAG00000020134	smndc1	100	86.555	Kryptolebias_marmoratus
ENSMMOG00000008856	smndc1	100	89.076	ENSLBEG00000004598	smndc1	100	89.076	Labrus_bergylta
ENSMMOG00000008856	smndc1	100	76.471	ENSLACG00000007784	SMNDC1	100	76.471	Latimeria_chalumnae
ENSMMOG00000008856	smndc1	100	81.513	ENSLOCG00000012355	smndc1	100	81.513	Lepisosteus_oculatus
ENSMMOG00000008856	smndc1	100	75.630	ENSLAFG00000014353	SMNDC1	100	75.630	Loxodonta_africana
ENSMMOG00000008856	smndc1	100	76.050	ENSMFAG00000002433	-	100	76.050	Macaca_fascicularis
ENSMMOG00000008856	smndc1	100	63.866	ENSMFAG00000038381	-	100	63.866	Macaca_fascicularis
ENSMMOG00000008856	smndc1	100	63.866	ENSMMUG00000045875	-	100	63.866	Macaca_mulatta
ENSMMOG00000008856	smndc1	100	76.050	ENSMMUG00000007775	SMNDC1	100	76.050	Macaca_mulatta
ENSMMOG00000008856	smndc1	100	76.050	ENSMNEG00000042963	-	100	76.050	Macaca_nemestrina
ENSMMOG00000008856	smndc1	100	66.807	ENSMNEG00000033853	-	100	66.807	Macaca_nemestrina
ENSMMOG00000008856	smndc1	100	71.548	ENSMLEG00000040236	SMNDC1	100	71.130	Mandrillus_leucophaeus
ENSMMOG00000008856	smndc1	89	88.263	ENSMAMG00000018233	smndc1	87	88.263	Mastacembelus_armatus
ENSMMOG00000008856	smndc1	100	86.555	ENSMZEG00005027510	smndc1	100	86.555	Maylandia_zebra
ENSMMOG00000008856	smndc1	84	76.000	ENSMGAG00000010777	SMNDC1	84	76.000	Meleagris_gallopavo
ENSMMOG00000008856	smndc1	100	76.050	ENSMAUG00000012243	-	100	76.050	Mesocricetus_auratus
ENSMMOG00000008856	smndc1	99	62.025	ENSMAUG00000005459	-	93	62.447	Mesocricetus_auratus
ENSMMOG00000008856	smndc1	100	75.630	ENSMICG00000027336	-	100	75.630	Microcebus_murinus
ENSMMOG00000008856	smndc1	100	65.546	ENSMICG00000031640	-	100	65.546	Microcebus_murinus
ENSMMOG00000008856	smndc1	100	75.630	ENSMOCG00000002458	Smndc1	100	75.630	Microtus_ochrogaster
ENSMMOG00000008856	smndc1	100	76.471	ENSMODG00000010542	SMNDC1	100	76.471	Monodelphis_domestica
ENSMMOG00000008856	smndc1	100	87.815	ENSMALG00000017598	smndc1	100	87.815	Monopterus_albus
ENSMMOG00000008856	smndc1	100	76.471	MGP_CAROLIEiJ_G0023072	Smndc1	100	76.471	Mus_caroli
ENSMMOG00000008856	smndc1	100	76.471	ENSMUSG00000025024	Smndc1	100	76.471	Mus_musculus
ENSMMOG00000008856	smndc1	100	76.471	MGP_PahariEiJ_G0014560	Smndc1	100	76.471	Mus_pahari
ENSMMOG00000008856	smndc1	100	76.471	MGP_SPRETEiJ_G0023993	Smndc1	100	76.471	Mus_spretus
ENSMMOG00000008856	smndc1	100	76.050	ENSMPUG00000002089	SMNDC1	100	76.050	Mustela_putorius_furo
ENSMMOG00000008856	smndc1	100	76.050	ENSMLUG00000016007	SMNDC1	100	76.050	Myotis_lucifugus
ENSMMOG00000008856	smndc1	100	75.630	ENSNGAG00000006833	Smndc1	100	75.630	Nannospalax_galili
ENSMMOG00000008856	smndc1	100	86.975	ENSNBRG00000017089	smndc1	100	86.975	Neolamprologus_brichardi
ENSMMOG00000008856	smndc1	100	76.050	ENSNLEG00000015471	SMNDC1	100	76.050	Nomascus_leucogenys
ENSMMOG00000008856	smndc1	82	54.000	ENSMEUG00000010120	-	99	54.000	Notamacropus_eugenii
ENSMMOG00000008856	smndc1	100	76.050	ENSOPRG00000015348	SMNDC1	100	76.050	Ochotona_princeps
ENSMMOG00000008856	smndc1	100	54.202	ENSODEG00000007594	-	100	52.101	Octodon_degus
ENSMMOG00000008856	smndc1	100	86.975	ENSONIG00000000434	smndc1	100	86.975	Oreochromis_niloticus
ENSMMOG00000008856	smndc1	100	76.891	ENSOANG00000001598	SMNDC1	100	76.891	Ornithorhynchus_anatinus
ENSMMOG00000008856	smndc1	100	55.882	ENSOCUG00000012274	-	100	58.403	Oryctolagus_cuniculus
ENSMMOG00000008856	smndc1	100	76.050	ENSOCUG00000008145	-	100	76.050	Oryctolagus_cuniculus
ENSMMOG00000008856	smndc1	100	84.034	ENSORLG00000005934	smndc1	95	84.034	Oryzias_latipes
ENSMMOG00000008856	smndc1	100	84.034	ENSORLG00020008796	smndc1	95	84.034	Oryzias_latipes_hni
ENSMMOG00000008856	smndc1	100	83.613	ENSORLG00015013666	smndc1	100	83.613	Oryzias_latipes_hsok
ENSMMOG00000008856	smndc1	100	82.353	ENSOMEG00000007590	smndc1	100	82.353	Oryzias_melastigma
ENSMMOG00000008856	smndc1	100	77.824	ENSOGAG00000000571	SMNDC1	100	77.824	Otolemur_garnettii
ENSMMOG00000008856	smndc1	100	77.824	ENSOARG00000009500	SMNDC1	100	77.824	Ovis_aries
ENSMMOG00000008856	smndc1	100	76.050	ENSPPAG00000027815	SMNDC1	100	76.050	Pan_paniscus
ENSMMOG00000008856	smndc1	100	76.050	ENSPPRG00000013749	SMNDC1	100	76.050	Panthera_pardus
ENSMMOG00000008856	smndc1	100	76.050	ENSPTIG00000011451	SMNDC1	100	76.050	Panthera_tigris_altaica
ENSMMOG00000008856	smndc1	100	76.050	ENSPTRG00000002937	SMNDC1	100	76.050	Pan_troglodytes
ENSMMOG00000008856	smndc1	100	71.008	ENSPANG00000031346	-	100	71.008	Papio_anubis
ENSMMOG00000008856	smndc1	100	76.050	ENSPANG00000020805	-	100	76.050	Papio_anubis
ENSMMOG00000008856	smndc1	100	80.252	ENSPKIG00000017164	smndc1	100	80.252	Paramormyrops_kingsleyae
ENSMMOG00000008856	smndc1	100	76.891	ENSPSIG00000012257	SMNDC1	100	76.891	Pelodiscus_sinensis
ENSMMOG00000008856	smndc1	100	82.353	ENSPMGG00000015651	smndc1	100	82.353	Periophthalmus_magnuspinnatus
ENSMMOG00000008856	smndc1	100	76.050	ENSPEMG00000022058	Smndc1	100	76.050	Peromyscus_maniculatus_bairdii
ENSMMOG00000008856	smndc1	100	63.115	ENSPMAG00000007705	smndc1	100	63.115	Petromyzon_marinus
ENSMMOG00000008856	smndc1	100	76.471	ENSPCIG00000018419	SMNDC1	100	76.471	Phascolarctos_cinereus
ENSMMOG00000008856	smndc1	95	57.522	ENSPCIG00000009693	-	98	57.522	Phascolarctos_cinereus
ENSMMOG00000008856	smndc1	100	87.395	ENSPFOG00000017113	smndc1	100	87.395	Poecilia_formosa
ENSMMOG00000008856	smndc1	100	86.555	ENSPLAG00000010372	smndc1	100	86.555	Poecilia_latipinna
ENSMMOG00000008856	smndc1	100	86.975	ENSPMEG00000012288	smndc1	100	86.975	Poecilia_mexicana
ENSMMOG00000008856	smndc1	100	86.134	ENSPREG00000012279	smndc1	100	86.134	Poecilia_reticulata
ENSMMOG00000008856	smndc1	100	76.050	ENSPPYG00000002643	SMNDC1	100	76.050	Pongo_abelii
ENSMMOG00000008856	smndc1	81	70.984	ENSPCAG00000016183	SMNDC1	100	70.984	Procavia_capensis
ENSMMOG00000008856	smndc1	100	75.630	ENSPCOG00000024343	SMNDC1	100	75.630	Propithecus_coquereli
ENSMMOG00000008856	smndc1	100	59.244	ENSPVAG00000004368	SMNDC1	100	59.244	Pteropus_vampyrus
ENSMMOG00000008856	smndc1	83	85.859	ENSPNYG00000024093	smndc1	86	85.859	Pundamilia_nyererei
ENSMMOG00000008856	smndc1	100	78.992	ENSPNAG00000025285	smndc1	100	78.992	Pygocentrus_nattereri
ENSMMOG00000008856	smndc1	100	76.471	ENSRNOG00000014833	Smndc1	100	76.471	Rattus_norvegicus
ENSMMOG00000008856	smndc1	100	61.345	ENSRBIG00000032452	-	100	61.345	Rhinopithecus_bieti
ENSMMOG00000008856	smndc1	100	75.630	ENSRBIG00000000224	-	100	75.630	Rhinopithecus_bieti
ENSMMOG00000008856	smndc1	100	76.050	ENSRROG00000044992	-	100	76.050	Rhinopithecus_roxellana
ENSMMOG00000008856	smndc1	100	61.765	ENSRROG00000039125	-	100	61.765	Rhinopithecus_roxellana
ENSMMOG00000008856	smndc1	100	76.050	ENSSBOG00000026789	SMNDC1	100	76.050	Saimiri_boliviensis_boliviensis
ENSMMOG00000008856	smndc1	100	76.471	ENSSHAG00000015189	SMNDC1	100	76.471	Sarcophilus_harrisii
ENSMMOG00000008856	smndc1	100	78.992	ENSSFOG00015008311	smndc1	100	78.992	Scleropages_formosus
ENSMMOG00000008856	smndc1	100	86.975	ENSSMAG00000020118	smndc1	100	86.975	Scophthalmus_maximus
ENSMMOG00000008856	smndc1	100	90.756	ENSSDUG00000015330	smndc1	100	90.756	Seriola_dumerili
ENSMMOG00000008856	smndc1	100	91.176	ENSSLDG00000017325	smndc1	100	91.176	Seriola_lalandi_dorsalis
ENSMMOG00000008856	smndc1	100	76.471	ENSSARG00000006063	SMNDC1	100	76.471	Sorex_araneus
ENSMMOG00000008856	smndc1	100	76.471	ENSSPUG00000004574	SMNDC1	100	76.471	Sphenodon_punctatus
ENSMMOG00000008856	smndc1	100	87.395	ENSSPAG00000000338	smndc1	100	87.395	Stegastes_partitus
ENSMMOG00000008856	smndc1	100	76.050	ENSSSCG00000030507	SMNDC1	100	76.050	Sus_scrofa
ENSMMOG00000008856	smndc1	100	76.050	ENSTGUG00000010599	SMNDC1	100	76.050	Taeniopygia_guttata
ENSMMOG00000008856	smndc1	100	87.395	ENSTRUG00000023281	smndc1	100	87.395	Takifugu_rubripes
ENSMMOG00000008856	smndc1	100	86.555	ENSTNIG00000013331	smndc1	100	86.555	Tetraodon_nigroviridis
ENSMMOG00000008856	smndc1	100	76.050	ENSTBEG00000014337	SMNDC1	100	76.050	Tupaia_belangeri
ENSMMOG00000008856	smndc1	100	76.050	ENSUAMG00000008142	SMNDC1	100	76.050	Ursus_americanus
ENSMMOG00000008856	smndc1	100	76.050	ENSUMAG00000023722	SMNDC1	100	76.050	Ursus_maritimus
ENSMMOG00000008856	smndc1	83	75.253	ENSVPAG00000003402	SMNDC1	100	75.253	Vicugna_pacos
ENSMMOG00000008856	smndc1	100	76.050	ENSVVUG00000007820	SMNDC1	100	76.050	Vulpes_vulpes
ENSMMOG00000008856	smndc1	60	63.380	ENSXETG00000015415	SMNDC1	100	63.380	Xenopus_tropicalis
ENSMMOG00000008856	smndc1	100	86.555	ENSXCOG00000009159	smndc1	100	86.555	Xiphophorus_couchianus
ENSMMOG00000008856	smndc1	100	87.395	ENSXMAG00000012755	smndc1	100	87.395	Xiphophorus_maculatus