EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000008884 (Gene tree)
Gene ID: -
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 5856 bases
Position: chrKV751319.1:8762009-8767864
Accession: ZDB-GENE-030131-2184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000011544	MMR_HSR1	PF01926.23	3.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000011742	-	1746	-	ENSMMOP00000011544	581 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000008884's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000008884's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000008884	lsg1	63	32.750	ENSMMOG00000015833	gnl1	64	30.583

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000008884	lsg1	99	68.788	ENSG00000041802	LSG1	90	78.882	Homo_sapiens
ENSMMOG00000008884	lsg1	100	77.316	ENSAPOG00000009694	lsg1	99	77.162	Acanthochromis_polyacanthus
ENSMMOG00000008884	lsg1	98	70.751	ENSAMEG00000009343	LSG1	82	72.083	Ailuropoda_melanoleuca
ENSMMOG00000008884	lsg1	100	77.033	ENSAOCG00000016066	lsg1	99	77.362	Amphiprion_ocellaris
ENSMMOG00000008884	lsg1	100	77.541	ENSAPEG00000003252	lsg1	99	77.199	Amphiprion_percula
ENSMMOG00000008884	lsg1	98	77.544	ENSATEG00000011794	lsg1	87	89.167	Anabas_testudineus
ENSMMOG00000008884	lsg1	94	58.266	ENSACAG00000004222	LSG1	84	73.733	Anolis_carolinensis
ENSMMOG00000008884	lsg1	99	73.179	ENSANAG00000021153	LSG1	83	73.361	Aotus_nancymaae
ENSMMOG00000008884	lsg1	100	75.655	ENSACLG00000000520	lsg1	85	89.796	Astatotilapia_calliptera
ENSMMOG00000008884	lsg1	100	75.472	ENSAMXG00000008271	lsg1	86	81.667	Astyanax_mexicanus
ENSMMOG00000008884	lsg1	99	71.111	ENSBTAG00000008461	LSG1	83	73.179	Bos_taurus
ENSMMOG00000008884	lsg1	83	43.711	WBGene00016907	C53H9.2	89	41.558	Caenorhabditis_elegans
ENSMMOG00000008884	lsg1	99	70.570	ENSCJAG00000013962	LSG1	83	73.770	Callithrix_jacchus
ENSMMOG00000008884	lsg1	90	75.000	ENSCAFG00000013445	LSG1	84	75.000	Canis_familiaris
ENSMMOG00000008884	lsg1	96	72.368	ENSCAFG00020002216	LSG1	84	74.194	Canis_lupus_dingo
ENSMMOG00000008884	lsg1	98	71.206	ENSCHIG00000015769	LSG1	85	72.131	Capra_hircus
ENSMMOG00000008884	lsg1	99	69.018	ENSTSYG00000001447	LSG1	81	73.418	Carlito_syrichta
ENSMMOG00000008884	lsg1	94	62.895	ENSCAPG00000009856	LSG1	86	75.909	Cavia_aperea
ENSMMOG00000008884	lsg1	99	71.854	ENSCCAG00000035744	LSG1	83	73.361	Cebus_capucinus
ENSMMOG00000008884	lsg1	99	69.597	ENSCATG00000042060	LSG1	83	72.517	Cercocebus_atys
ENSMMOG00000008884	lsg1	99	68.788	ENSCSAG00000008796	LSG1	76	73.179	Chlorocebus_sabaeus
ENSMMOG00000008884	lsg1	99	72.368	ENSCPBG00000015941	LSG1	69	74.583	Chrysemys_picta_bellii
ENSMMOG00000008884	lsg1	83	53.719	ENSCING00000007079	-	97	53.390	Ciona_intestinalis
ENSMMOG00000008884	lsg1	83	53.416	ENSCSAVG00000002514	-	96	52.532	Ciona_savignyi
ENSMMOG00000008884	lsg1	99	68.485	ENSCANG00000030709	LSG1	81	74.348	Colobus_angolensis_palliatus
ENSMMOG00000008884	lsg1	94	74.180	ENSCGRG00001019846	Lsg1	84	74.892	Cricetulus_griseus_chok1gshd
ENSMMOG00000008884	lsg1	94	74.180	ENSCGRG00000014617	Lsg1	83	74.892	Cricetulus_griseus_crigri
ENSMMOG00000008884	lsg1	98	75.040	ENSCSEG00000008522	lsg1	86	86.364	Cynoglossus_semilaevis
ENSMMOG00000008884	lsg1	97	75.614	ENSCVAG00000002484	lsg1	98	75.654	Cyprinodon_variegatus
ENSMMOG00000008884	lsg1	100	71.562	ENSDARG00000015352	lsg1	98	70.128	Danio_rerio
ENSMMOG00000008884	lsg1	98	70.370	ENSDNOG00000006224	LSG1	84	71.845	Dasypus_novemcinctus
ENSMMOG00000008884	lsg1	99	50.980	FBgn0266284	Ns3	98	50.751	Drosophila_melanogaster
ENSMMOG00000008884	lsg1	81	78.667	ENSETEG00000003888	LSG1	70	82.258	Echinops_telfairi
ENSMMOG00000008884	lsg1	87	54.799	ENSEBUG00000003119	lsg1	72	63.259	Eptatretus_burgeri
ENSMMOG00000008884	lsg1	99	71.429	ENSEASG00005000678	LSG1	83	73.510	Equus_asinus_asinus
ENSMMOG00000008884	lsg1	99	71.429	ENSECAG00000017659	LSG1	83	73.510	Equus_caballus
ENSMMOG00000008884	lsg1	83	69.919	ENSEEUG00000015217	LSG1	70	80.000	Erinaceus_europaeus
ENSMMOG00000008884	lsg1	100	70.288	ENSELUG00000023973	lsg1	98	70.473	Esox_lucius
ENSMMOG00000008884	lsg1	95	73.000	ENSFCAG00000024957	LSG1	83	73.000	Felis_catus
ENSMMOG00000008884	lsg1	97	69.427	ENSFALG00000007210	LSG1	83	69.872	Ficedula_albicollis
ENSMMOG00000008884	lsg1	96	71.605	ENSFDAG00000017373	LSG1	84	73.043	Fukomys_damarensis
ENSMMOG00000008884	lsg1	97	74.920	ENSFHEG00000003680	lsg1	86	87.603	Fundulus_heteroclitus
ENSMMOG00000008884	lsg1	98	69.132	ENSGMOG00000015834	lsg1	87	81.893	Gadus_morhua
ENSMMOG00000008884	lsg1	95	71.237	ENSGALG00000007058	LSG1	71	71.237	Gallus_gallus
ENSMMOG00000008884	lsg1	97	76.230	ENSGAFG00000015831	lsg1	98	76.672	Gambusia_affinis
ENSMMOG00000008884	lsg1	98	75.962	ENSGACG00000009323	lsg1	87	87.654	Gasterosteus_aculeatus
ENSMMOG00000008884	lsg1	99	68.571	ENSGGOG00000000520	LSG1	83	72.517	Gorilla_gorilla
ENSMMOG00000008884	lsg1	100	77.379	ENSHBUG00000005659	lsg1	85	91.250	Haplochromis_burtoni
ENSMMOG00000008884	lsg1	99	63.449	ENSHGLG00000017390	LSG1	98	63.710	Heterocephalus_glaber_female
ENSMMOG00000008884	lsg1	99	63.608	ENSHGLG00100018587	LSG1	98	63.710	Heterocephalus_glaber_male
ENSMMOG00000008884	lsg1	97	75.000	ENSHCOG00000016848	lsg1	85	85.830	Hippocampus_comes
ENSMMOG00000008884	lsg1	100	72.973	ENSIPUG00000008631	lsg1	98	72.358	Ictalurus_punctatus
ENSMMOG00000008884	lsg1	71	72.185	ENSSTOG00000010234	LSG1	74	72.185	Ictidomys_tridecemlineatus
ENSMMOG00000008884	lsg1	99	64.207	ENSJJAG00000015513	Lsg1	98	63.942	Jaculus_jaculus
ENSMMOG00000008884	lsg1	98	76.617	ENSKMAG00000009681	lsg1	98	76.451	Kryptolebias_marmoratus
ENSMMOG00000008884	lsg1	98	81.282	ENSLBEG00000024261	lsg1	98	81.664	Labrus_bergylta
ENSMMOG00000008884	lsg1	97	76.680	ENSLACG00000013399	LSG1	82	77.500	Latimeria_chalumnae
ENSMMOG00000008884	lsg1	97	82.917	ENSLOCG00000004918	lsg1	83	82.917	Lepisosteus_oculatus
ENSMMOG00000008884	lsg1	99	62.326	ENSLAFG00000012919	-	84	72.667	Loxodonta_africana
ENSMMOG00000008884	lsg1	99	68.864	ENSMFAG00000039903	LSG1	83	73.179	Macaca_fascicularis
ENSMMOG00000008884	lsg1	99	68.864	ENSMMUG00000010708	LSG1	83	72.848	Macaca_mulatta
ENSMMOG00000008884	lsg1	99	68.864	ENSMNEG00000031538	LSG1	83	73.179	Macaca_nemestrina
ENSMMOG00000008884	lsg1	98	73.179	ENSMLEG00000041184	LSG1	83	73.179	Mandrillus_leucophaeus
ENSMMOG00000008884	lsg1	100	77.170	ENSMAMG00000000470	lsg1	98	76.519	Mastacembelus_armatus
ENSMMOG00000008884	lsg1	100	77.379	ENSMZEG00005017865	lsg1	85	91.250	Maylandia_zebra
ENSMMOG00000008884	lsg1	85	70.950	ENSMGAG00000007050	LSG1	81	71.237	Meleagris_gallopavo
ENSMMOG00000008884	lsg1	90	63.014	ENSMAUG00000016976	Lsg1	76	74.026	Mesocricetus_auratus
ENSMMOG00000008884	lsg1	98	70.886	ENSMICG00000049087	LSG1	83	72.848	Microcebus_murinus
ENSMMOG00000008884	lsg1	99	62.346	ENSMOCG00000022136	Lsg1	82	73.707	Microtus_ochrogaster
ENSMMOG00000008884	lsg1	99	53.067	ENSMODG00000019828	LSG1	84	62.656	Monodelphis_domestica
ENSMMOG00000008884	lsg1	100	63.820	MGP_CAROLIEiJ_G0020648	Lsg1	85	73.667	Mus_caroli
ENSMMOG00000008884	lsg1	100	63.665	ENSMUSG00000022538	Lsg1	85	73.333	Mus_musculus
ENSMMOG00000008884	lsg1	97	72.177	MGP_PahariEiJ_G0016352	Lsg1	84	73.333	Mus_pahari
ENSMMOG00000008884	lsg1	100	63.665	MGP_SPRETEiJ_G0021544	Lsg1	85	73.333	Mus_spretus
ENSMMOG00000008884	lsg1	98	71.094	ENSMPUG00000003734	LSG1	83	72.428	Mustela_putorius_furo
ENSMMOG00000008884	lsg1	100	63.093	ENSMLUG00000012548	LSG1	83	73.090	Myotis_lucifugus
ENSMMOG00000008884	lsg1	99	63.240	ENSNGAG00000021872	Lsg1	85	72.917	Nannospalax_galili
ENSMMOG00000008884	lsg1	99	73.510	ENSNLEG00000008293	LSG1	83	73.510	Nomascus_leucogenys
ENSMMOG00000008884	lsg1	73	69.072	ENSMEUG00000009041	-	77	69.072	Notamacropus_eugenii
ENSMMOG00000008884	lsg1	100	76.316	ENSONIG00000002635	lsg1	86	90.417	Oreochromis_niloticus
ENSMMOG00000008884	lsg1	94	63.857	ENSOANG00000012742	LSG1	84	75.455	Ornithorhynchus_anatinus
ENSMMOG00000008884	lsg1	99	71.542	ENSOCUG00000004817	LSG1	83	73.139	Oryctolagus_cuniculus
ENSMMOG00000008884	lsg1	98	76.910	ENSORLG00000007695	lsg1	98	77.076	Oryzias_latipes
ENSMMOG00000008884	lsg1	98	75.738	ENSORLG00020016286	lsg1	98	73.443	Oryzias_latipes_hni
ENSMMOG00000008884	lsg1	98	77.517	ENSORLG00015012025	lsg1	98	77.517	Oryzias_latipes_hsok
ENSMMOG00000008884	lsg1	98	76.539	ENSOMEG00000022379	lsg1	98	76.373	Oryzias_melastigma
ENSMMOG00000008884	lsg1	99	73.090	ENSOGAG00000003475	LSG1	83	73.090	Otolemur_garnettii
ENSMMOG00000008884	lsg1	98	71.206	ENSOARG00000020403	LSG1	83	74.043	Ovis_aries
ENSMMOG00000008884	lsg1	99	68.571	ENSPPAG00000029271	LSG1	83	72.848	Pan_paniscus
ENSMMOG00000008884	lsg1	95	71.661	ENSPPRG00000010281	LSG1	83	72.131	Panthera_pardus
ENSMMOG00000008884	lsg1	95	73.333	ENSPTIG00000010789	LSG1	83	73.333	Panthera_tigris_altaica
ENSMMOG00000008884	lsg1	99	68.571	ENSPTRG00000015760	LSG1	83	72.517	Pan_troglodytes
ENSMMOG00000008884	lsg1	99	68.498	ENSPANG00000018249	LSG1	83	72.848	Papio_anubis
ENSMMOG00000008884	lsg1	99	68.354	ENSPKIG00000002895	lsg1	87	78.689	Paramormyrops_kingsleyae
ENSMMOG00000008884	lsg1	95	59.177	ENSPSIG00000009821	LSG1	85	68.936	Pelodiscus_sinensis
ENSMMOG00000008884	lsg1	94	74.832	ENSPMGG00000000931	lsg1	100	74.664	Periophthalmus_magnuspinnatus
ENSMMOG00000008884	lsg1	99	63.174	ENSPEMG00000012082	-	83	74.892	Peromyscus_maniculatus_bairdii
ENSMMOG00000008884	lsg1	99	64.526	ENSPMAG00000007451	lsg1	83	67.227	Petromyzon_marinus
ENSMMOG00000008884	lsg1	98	65.263	ENSPCIG00000013890	LSG1	68	81.897	Phascolarctos_cinereus
ENSMMOG00000008884	lsg1	97	75.000	ENSPFOG00000021882	lsg1	86	90.000	Poecilia_formosa
ENSMMOG00000008884	lsg1	97	74.355	ENSPLAG00000019536	lsg1	86	89.167	Poecilia_latipinna
ENSMMOG00000008884	lsg1	97	73.955	ENSPMEG00000017281	lsg1	86	88.333	Poecilia_mexicana
ENSMMOG00000008884	lsg1	97	63.694	ENSPREG00000006048	lsg1	86	88.750	Poecilia_reticulata
ENSMMOG00000008884	lsg1	91	67.247	ENSPPYG00000014425	LSG1	82	72.951	Pongo_abelii
ENSMMOG00000008884	lsg1	80	74.667	ENSPCAG00000005511	LSG1	69	79.032	Procavia_capensis
ENSMMOG00000008884	lsg1	99	70.570	ENSPCOG00000012360	LSG1	82	72.517	Propithecus_coquereli
ENSMMOG00000008884	lsg1	100	75.655	ENSPNYG00000021994	lsg1	85	90.204	Pundamilia_nyererei
ENSMMOG00000008884	lsg1	100	71.851	ENSPNAG00000015533	lsg1	85	83.333	Pygocentrus_nattereri
ENSMMOG00000008884	lsg1	100	71.937	ENSRNOG00000001727	Lsg1	83	72.500	Rattus_norvegicus
ENSMMOG00000008884	lsg1	99	68.485	ENSRBIG00000029053	LSG1	82	72.848	Rhinopithecus_bieti
ENSMMOG00000008884	lsg1	99	68.485	ENSRROG00000037702	LSG1	82	72.848	Rhinopithecus_roxellana
ENSMMOG00000008884	lsg1	80	44.008	YGL099W	LSG1	74	43.579	Saccharomyces_cerevisiae
ENSMMOG00000008884	lsg1	99	73.510	ENSSBOG00000034938	LSG1	83	73.510	Saimiri_boliviensis_boliviensis
ENSMMOG00000008884	lsg1	75	68.111	ENSSHAG00000003487	LSG1	80	76.147	Sarcophilus_harrisii
ENSMMOG00000008884	lsg1	98	70.787	ENSSFOG00015008955	lsg1	86	80.000	Scleropages_formosus
ENSMMOG00000008884	lsg1	98	77.690	ENSSDUG00000004622	lsg1	85	91.250	Seriola_dumerili
ENSMMOG00000008884	lsg1	98	79.316	ENSSLDG00000010869	lsg1	88	91.667	Seriola_lalandi_dorsalis
ENSMMOG00000008884	lsg1	88	67.692	ENSSARG00000012981	LSG1	73	70.861	Sorex_araneus
ENSMMOG00000008884	lsg1	100	62.137	ENSSPUG00000016347	LSG1	83	73.333	Sphenodon_punctatus
ENSMMOG00000008884	lsg1	98	78.667	ENSSPAG00000005508	lsg1	99	77.612	Stegastes_partitus
ENSMMOG00000008884	lsg1	100	69.307	ENSSSCG00000011827	LSG1	84	71.488	Sus_scrofa
ENSMMOG00000008884	lsg1	87	70.261	ENSTGUG00000009068	LSG1	82	70.261	Taeniopygia_guttata
ENSMMOG00000008884	lsg1	97	75.610	ENSTRUG00000017380	lsg1	98	74.757	Takifugu_rubripes
ENSMMOG00000008884	lsg1	97	77.868	ENSTNIG00000015570	lsg1	87	86.817	Tetraodon_nigroviridis
ENSMMOG00000008884	lsg1	90	82.796	ENSTTRG00000000559	LSG1	75	82.796	Tursiops_truncatus
ENSMMOG00000008884	lsg1	98	71.146	ENSUAMG00000012454	LSG1	82	72.093	Ursus_americanus
ENSMMOG00000008884	lsg1	98	71.146	ENSUMAG00000000855	LSG1	82	72.093	Ursus_maritimus
ENSMMOG00000008884	lsg1	94	71.617	ENSVPAG00000012400	LSG1	84	71.617	Vicugna_pacos
ENSMMOG00000008884	lsg1	90	74.324	ENSVVUG00000008956	LSG1	81	74.324	Vulpes_vulpes
ENSMMOG00000008884	lsg1	100	72.119	ENSXETG00000003451	lsg1	98	59.655	Xenopus_tropicalis
ENSMMOG00000008884	lsg1	97	75.121	ENSXCOG00000003239	lsg1	86	88.750	Xiphophorus_couchianus
ENSMMOG00000008884	lsg1	97	74.918	ENSXMAG00000005536	lsg1	87	89.167	Xiphophorus_maculatus