EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000009365 (Gene tree)
Gene ID: -
Gene Symbol: lsm11
Alias: im:7149708
Full Name: LSM11%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 3268 bases
Position: chrKV751330.1:4933898-4937165
Accession: ZDB-GENE-050309-124
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000012185	LSM	PF01423.22	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000012389	-	942	-	ENSMMOP00000012185	313 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000009365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000009365's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000009365	lsm11	50	40.097	ENSCAPG00000009739	LSM11	99	40.580	Cavia_aperea
ENSMMOG00000009365	lsm11	50	40.191	ENSCPOG00000000906	LSM11	98	40.670	Cavia_porcellus
ENSMMOG00000009365	lsm11	51	39.336	ENSCLAG00000017067	LSM11	91	39.810	Chinchilla_lanigera
ENSMMOG00000009365	lsm11	55	31.250	ENSCING00000002109	-	86	31.073	Ciona_intestinalis
ENSMMOG00000009365	lsm11	61	32.864	ENSCSAVG00000011571	-	77	32.864	Ciona_savignyi
ENSMMOG00000009365	lsm11	50	40.580	ENSCANG00000040781	LSM11	99	40.580	Colobus_angolensis_palliatus
ENSMMOG00000009365	lsm11	51	39.810	ENSCGRG00000000197	Lsm11	95	40.284	Cricetulus_griseus_crigri
ENSMMOG00000009365	lsm11	100	62.080	ENSCSEG00000019951	lsm11	100	62.893	Cynoglossus_semilaevis
ENSMMOG00000009365	lsm11	100	60.883	ENSCVAG00000011703	lsm11	100	60.883	Cyprinodon_variegatus
ENSMMOG00000009365	lsm11	50	41.063	ENSEEUG00000010814	LSM11	99	41.063	Erinaceus_europaeus
ENSMMOG00000009365	lsm11	50	40.580	ENSMLEG00000027420	LSM11	99	40.580	Mandrillus_leucophaeus
ENSMMOG00000009365	lsm11	52	44.751	ENSMLUG00000015930	LSM11	99	44.751	Myotis_lucifugus
ENSMMOG00000009365	lsm11	50	39.614	ENSOGAG00000009059	LSM11	98	40.580	Otolemur_garnettii
ENSMMOG00000009365	lsm11	100	56.575	ENSPMGG00000020709	lsm11	100	58.044	Periophthalmus_magnuspinnatus
ENSMMOG00000009365	lsm11	100	63.158	ENSPFOG00000000512	lsm11	98	61.350	Poecilia_formosa
ENSMMOG00000009365	lsm11	100	62.963	ENSPLAG00000019434	lsm11	100	61.162	Poecilia_latipinna
ENSMMOG00000009365	lsm11	100	63.636	ENSPREG00000019696	lsm11	89	63.438	Poecilia_reticulata
ENSMMOG00000009365	lsm11	51	40.758	ENSPCAG00000016360	LSM11	99	40.284	Procavia_capensis
ENSMMOG00000009365	lsm11	100	61.111	ENSXMAG00000008238	lsm11	100	61.111	Xiphophorus_maculatus