EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000009422 (Gene tree)
Gene ID: -
Gene Symbol: a1cf
Alias: acf
Full Name: apobec1 complementation factor
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 9507 bases
Position: chrKV751350.1:5716866-5726372
Accession: ZDB-GENE-060824-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000012253	DND1_DSRM	PF14709.7	5.7e-18	1	1
ENSMMOP00000012253	RRM_1	PF00076.22	2.5e-35	1	3
ENSMMOP00000012253	RRM_1	PF00076.22	2.5e-35	2	3
ENSMMOP00000012253	RRM_1	PF00076.22	2.5e-35	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000012457	-	1710	-	ENSMMOP00000012253	569 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000009422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000009422's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000009422	a1cf	77	54.701	ENSMMOG00000007260	rbm47	73	53.533
ENSMMOG00000009422	a1cf	62	57.679	ENSMMOG00000011214	rbm46	68	55.556
ENSMMOG00000009422	a1cf	50	47.987	ENSMMOG00000017676	syncrip	64	41.019

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000009422	a1cf	100	70.266	ENSG00000148584	A1CF	100	75.248	Homo_sapiens
ENSMMOG00000009422	a1cf	100	75.000	ENSAPOG00000008259	a1cf	100	74.155	Acanthochromis_polyacanthus
ENSMMOG00000009422	a1cf	100	69.572	ENSAMEG00000000523	A1CF	100	67.652	Ailuropoda_melanoleuca
ENSMMOG00000009422	a1cf	100	80.231	ENSACIG00000008632	a1cf	100	79.407	Amphilophus_citrinellus
ENSMMOG00000009422	a1cf	100	78.885	ENSAOCG00000023744	a1cf	100	78.041	Amphiprion_ocellaris
ENSMMOG00000009422	a1cf	100	77.667	ENSAPEG00000009537	a1cf	100	76.833	Amphiprion_percula
ENSMMOG00000009422	a1cf	100	79.104	ENSATEG00000013720	a1cf	100	79.104	Anabas_testudineus
ENSMMOG00000009422	a1cf	100	68.709	ENSAPLG00000002964	A1CF	100	66.667	Anas_platyrhynchos
ENSMMOG00000009422	a1cf	100	68.624	ENSACAG00000015269	A1CF	100	67.953	Anolis_carolinensis
ENSMMOG00000009422	a1cf	100	70.764	ENSANAG00000019974	A1CF	100	68.605	Aotus_nancymaae
ENSMMOG00000009422	a1cf	100	79.252	ENSACLG00000017428	a1cf	100	79.762	Astatotilapia_calliptera
ENSMMOG00000009422	a1cf	100	69.637	ENSAMXG00000018180	a1cf	100	70.530	Astyanax_mexicanus
ENSMMOG00000009422	a1cf	100	70.481	ENSBTAG00000021195	A1CF	100	68.657	Bos_taurus
ENSMMOG00000009422	a1cf	100	69.672	ENSCJAG00000005045	A1CF	100	67.541	Callithrix_jacchus
ENSMMOG00000009422	a1cf	100	69.357	ENSCAFG00000015581	A1CF	100	67.323	Canis_familiaris
ENSMMOG00000009422	a1cf	100	69.357	ENSCAFG00020026421	A1CF	98	82.333	Canis_lupus_dingo
ENSMMOG00000009422	a1cf	100	69.558	ENSCHIG00000020411	A1CF	100	67.758	Capra_hircus
ENSMMOG00000009422	a1cf	94	70.141	ENSTSYG00000001755	A1CF	93	71.917	Carlito_syrichta
ENSMMOG00000009422	a1cf	100	76.133	ENSCAPG00000017386	A1CF	100	78.073	Cavia_aperea
ENSMMOG00000009422	a1cf	100	69.180	ENSCPOG00000009807	A1CF	100	67.213	Cavia_porcellus
ENSMMOG00000009422	a1cf	100	69.622	ENSCCAG00000018168	A1CF	100	67.488	Cebus_capucinus
ENSMMOG00000009422	a1cf	100	70.000	ENSCATG00000043715	A1CF	100	68.053	Cercocebus_atys
ENSMMOG00000009422	a1cf	100	68.740	ENSCLAG00000010424	A1CF	100	67.430	Chinchilla_lanigera
ENSMMOG00000009422	a1cf	100	69.572	ENSCSAG00000007032	A1CF	100	67.652	Chlorocebus_sabaeus
ENSMMOG00000009422	a1cf	95	69.861	ENSCHOG00000009089	A1CF	94	68.293	Choloepus_hoffmanni
ENSMMOG00000009422	a1cf	100	68.525	ENSCPBG00000026464	A1CF	100	66.721	Chrysemys_picta_bellii
ENSMMOG00000009422	a1cf	100	69.408	ENSCANG00000038032	A1CF	100	67.488	Colobus_angolensis_palliatus
ENSMMOG00000009422	a1cf	100	67.430	ENSCGRG00001017413	A1cf	100	66.450	Cricetulus_griseus_chok1gshd
ENSMMOG00000009422	a1cf	100	67.430	ENSCGRG00000017332	A1cf	100	66.069	Cricetulus_griseus_crigri
ENSMMOG00000009422	a1cf	100	74.475	ENSCSEG00000002361	a1cf	100	74.475	Cynoglossus_semilaevis
ENSMMOG00000009422	a1cf	100	77.612	ENSCVAG00000010520	a1cf	100	77.944	Cyprinodon_variegatus
ENSMMOG00000009422	a1cf	100	73.833	ENSDARG00000002968	a1cf	100	73.045	Danio_rerio
ENSMMOG00000009422	a1cf	100	68.903	ENSDNOG00000002829	A1CF	100	66.939	Dasypus_novemcinctus
ENSMMOG00000009422	a1cf	78	80.309	ENSETEG00000012527	A1CF	71	89.815	Echinops_telfairi
ENSMMOG00000009422	a1cf	100	69.168	ENSEASG00005012924	A1CF	100	67.700	Equus_asinus_asinus
ENSMMOG00000009422	a1cf	100	68.679	ENSECAG00000010424	A1CF	100	67.210	Equus_caballus
ENSMMOG00000009422	a1cf	82	64.240	ENSEEUG00000000013	A1CF	99	62.955	Erinaceus_europaeus
ENSMMOG00000009422	a1cf	100	73.333	ENSELUG00000003159	a1cf	100	72.500	Esox_lucius
ENSMMOG00000009422	a1cf	100	70.167	ENSFCAG00000011179	A1CF	100	68.053	Felis_catus
ENSMMOG00000009422	a1cf	100	70.302	ENSFALG00000013183	A1CF	100	68.456	Ficedula_albicollis
ENSMMOG00000009422	a1cf	100	69.320	ENSFDAG00000019371	A1CF	100	68.159	Fukomys_damarensis
ENSMMOG00000009422	a1cf	100	76.780	ENSFHEG00000019652	a1cf	100	77.834	Fundulus_heteroclitus
ENSMMOG00000009422	a1cf	100	70.588	ENSGMOG00000018943	a1cf	100	69.748	Gadus_morhua
ENSMMOG00000009422	a1cf	95	68.221	ENSGALG00000003765	A1CF	89	70.000	Gallus_gallus
ENSMMOG00000009422	a1cf	100	74.658	ENSGAFG00000014868	a1cf	100	73.630	Gambusia_affinis
ENSMMOG00000009422	a1cf	100	79.500	ENSGACG00000010241	a1cf	100	79.201	Gasterosteus_aculeatus
ENSMMOG00000009422	a1cf	89	71.082	ENSGAGG00000016508	A1CF	90	69.963	Gopherus_agassizii
ENSMMOG00000009422	a1cf	100	69.344	ENSGGOG00000009670	A1CF	100	67.541	Gorilla_gorilla
ENSMMOG00000009422	a1cf	100	78.748	ENSHBUG00000021959	a1cf	100	79.242	Haplochromis_burtoni
ENSMMOG00000009422	a1cf	100	68.740	ENSHGLG00000008955	A1CF	100	67.430	Heterocephalus_glaber_female
ENSMMOG00000009422	a1cf	100	68.085	ENSHGLG00100000518	A1CF	100	66.776	Heterocephalus_glaber_male
ENSMMOG00000009422	a1cf	100	65.478	ENSHCOG00000017669	a1cf	100	66.613	Hippocampus_comes
ENSMMOG00000009422	a1cf	86	80.157	ENSIPUG00000010367	a1cf	89	79.175	Ictalurus_punctatus
ENSMMOG00000009422	a1cf	100	75.610	ENSKMAG00000006568	a1cf	100	75.610	Kryptolebias_marmoratus
ENSMMOG00000009422	a1cf	99	77.741	ENSLBEG00000020994	a1cf	99	78.723	Labrus_bergylta
ENSMMOG00000009422	a1cf	100	72.269	ENSLACG00000008061	A1CF	100	70.420	Latimeria_chalumnae
ENSMMOG00000009422	a1cf	100	72.517	ENSLOCG00000006302	a1cf	100	70.033	Lepisosteus_oculatus
ENSMMOG00000009422	a1cf	100	69.885	ENSLAFG00000015462	A1CF	100	69.558	Loxodonta_africana
ENSMMOG00000009422	a1cf	100	70.333	ENSMFAG00000035948	A1CF	100	68.386	Macaca_fascicularis
ENSMMOG00000009422	a1cf	100	70.333	ENSMMUG00000007077	A1CF	100	68.386	Macaca_mulatta
ENSMMOG00000009422	a1cf	100	70.000	ENSMNEG00000031454	A1CF	100	68.053	Macaca_nemestrina
ENSMMOG00000009422	a1cf	100	69.079	ENSMLEG00000037223	A1CF	100	67.159	Mandrillus_leucophaeus
ENSMMOG00000009422	a1cf	100	76.860	ENSMAMG00000010402	a1cf	100	78.347	Mastacembelus_armatus
ENSMMOG00000009422	a1cf	100	78.477	ENSMZEG00005013245	a1cf	100	77.011	Maylandia_zebra
ENSMMOG00000009422	a1cf	100	68.430	ENSMGAG00000001507	A1CF	100	66.446	Meleagris_gallopavo
ENSMMOG00000009422	a1cf	100	67.267	ENSMAUG00000007422	A1cf	100	65.794	Mesocricetus_auratus
ENSMMOG00000009422	a1cf	100	69.307	ENSMICG00000003377	A1CF	100	69.637	Microcebus_murinus
ENSMMOG00000009422	a1cf	100	67.921	ENSMOCG00000021536	A1cf	100	66.448	Microtus_ochrogaster
ENSMMOG00000009422	a1cf	86	75.800	ENSMODG00000016478	A1CF	90	74.000	Monodelphis_domestica
ENSMMOG00000009422	a1cf	100	73.756	ENSMALG00000012992	a1cf	100	72.727	Monopterus_albus
ENSMMOG00000009422	a1cf	100	68.823	MGP_CAROLIEiJ_G0022873	A1cf	100	67.496	Mus_caroli
ENSMMOG00000009422	a1cf	100	68.823	ENSMUSG00000052595	A1cf	99	81.333	Mus_musculus
ENSMMOG00000009422	a1cf	100	69.652	MGP_PahariEiJ_G0014366	A1cf	100	67.496	Mus_pahari
ENSMMOG00000009422	a1cf	100	69.052	MGP_SPRETEiJ_G0023792	A1cf	100	67.442	Mus_spretus
ENSMMOG00000009422	a1cf	100	64.145	ENSMPUG00000016971	A1CF	100	62.069	Mustela_putorius_furo
ENSMMOG00000009422	a1cf	100	69.722	ENSMLUG00000016071	A1CF	100	67.921	Myotis_lucifugus
ENSMMOG00000009422	a1cf	100	68.412	ENSNGAG00000015136	A1cf	100	67.267	Nannospalax_galili
ENSMMOG00000009422	a1cf	100	78.418	ENSNBRG00000001712	a1cf	100	78.913	Neolamprologus_brichardi
ENSMMOG00000009422	a1cf	100	69.231	ENSNLEG00000012028	A1CF	100	67.267	Nomascus_leucogenys
ENSMMOG00000009422	a1cf	94	70.194	ENSMEUG00000015909	A1CF	93	71.917	Notamacropus_eugenii
ENSMMOG00000009422	a1cf	86	64.453	ENSOPRG00000010667	A1CF	91	62.305	Ochotona_princeps
ENSMMOG00000009422	a1cf	100	78.748	ENSONIG00000019105	a1cf	100	79.242	Oreochromis_niloticus
ENSMMOG00000009422	a1cf	80	73.784	ENSOANG00000007360	A1CF	99	72.516	Ornithorhynchus_anatinus
ENSMMOG00000009422	a1cf	100	69.536	ENSOCUG00000011587	A1CF	100	68.543	Oryctolagus_cuniculus
ENSMMOG00000009422	a1cf	100	77.349	ENSORLG00000013342	a1cf	100	76.510	Oryzias_latipes
ENSMMOG00000009422	a1cf	100	76.268	ENSORLG00020000586	a1cf	100	76.105	Oryzias_latipes_hni
ENSMMOG00000009422	a1cf	100	76.268	ENSORLG00015018569	a1cf	100	76.105	Oryzias_latipes_hsok
ENSMMOG00000009422	a1cf	100	76.364	ENSOMEG00000013531	a1cf	100	75.537	Oryzias_melastigma
ENSMMOG00000009422	a1cf	100	67.928	ENSOGAG00000012884	A1CF	100	67.652	Otolemur_garnettii
ENSMMOG00000009422	a1cf	100	69.394	ENSOARG00000013695	A1CF	100	67.921	Ovis_aries
ENSMMOG00000009422	a1cf	95	68.912	ENSPPAG00000028115	A1CF	99	73.622	Pan_paniscus
ENSMMOG00000009422	a1cf	100	69.243	ENSPPRG00000012180	A1CF	100	67.159	Panthera_pardus
ENSMMOG00000009422	a1cf	100	69.243	ENSPTIG00000021223	A1CF	100	67.159	Panthera_tigris_altaica
ENSMMOG00000009422	a1cf	100	70.266	ENSPTRG00000002508	A1CF	100	68.439	Pan_troglodytes
ENSMMOG00000009422	a1cf	100	70.333	ENSPANG00000021988	A1CF	100	68.386	Papio_anubis
ENSMMOG00000009422	a1cf	100	73.311	ENSPKIG00000025176	a1cf	100	72.158	Paramormyrops_kingsleyae
ENSMMOG00000009422	a1cf	100	69.347	ENSPSIG00000010318	A1CF	100	67.504	Pelodiscus_sinensis
ENSMMOG00000009422	a1cf	86	72.600	ENSPMGG00000013359	a1cf	99	65.017	Periophthalmus_magnuspinnatus
ENSMMOG00000009422	a1cf	100	69.067	ENSPEMG00000015021	A1cf	100	66.939	Peromyscus_maniculatus_bairdii
ENSMMOG00000009422	a1cf	100	69.717	ENSPCIG00000002175	A1CF	100	69.384	Phascolarctos_cinereus
ENSMMOG00000009422	a1cf	100	75.244	ENSPFOG00000006683	a1cf	100	76.221	Poecilia_formosa
ENSMMOG00000009422	a1cf	100	75.081	ENSPFOG00000007437	-	100	76.059	Poecilia_formosa
ENSMMOG00000009422	a1cf	100	76.073	ENSPLAG00000001210	-	100	77.063	Poecilia_latipinna
ENSMMOG00000009422	a1cf	100	76.073	ENSPLAG00000000026	a1cf	100	77.063	Poecilia_latipinna
ENSMMOG00000009422	a1cf	100	66.612	ENSPMEG00000015529	-	100	67.590	Poecilia_mexicana
ENSMMOG00000009422	a1cf	100	67.492	ENSPMEG00000000921	a1cf	100	68.482	Poecilia_mexicana
ENSMMOG00000009422	a1cf	100	74.919	ENSPREG00000016298	a1cf	100	76.059	Poecilia_reticulata
ENSMMOG00000009422	a1cf	100	70.149	ENSPPYG00000002819	A1CF	100	68.159	Pongo_abelii
ENSMMOG00000009422	a1cf	80	62.004	ENSPCAG00000006463	A1CF	79	62.004	Procavia_capensis
ENSMMOG00000009422	a1cf	100	68.464	ENSPCOG00000024172	A1CF	100	68.464	Propithecus_coquereli
ENSMMOG00000009422	a1cf	100	77.886	ENSPNYG00000017944	a1cf	100	78.374	Pundamilia_nyererei
ENSMMOG00000009422	a1cf	100	73.762	ENSPNAG00000007704	a1cf	100	72.937	Pygocentrus_nattereri
ENSMMOG00000009422	a1cf	100	68.988	ENSRNOG00000033195	A1cf	100	68.325	Rattus_norvegicus
ENSMMOG00000009422	a1cf	100	68.227	ENSRBIG00000042892	A1CF	100	70.543	Rhinopithecus_bieti
ENSMMOG00000009422	a1cf	100	69.408	ENSRROG00000041398	A1CF	100	67.488	Rhinopithecus_roxellana
ENSMMOG00000009422	a1cf	100	69.787	ENSSBOG00000021930	A1CF	100	72.008	Saimiri_boliviensis_boliviensis
ENSMMOG00000009422	a1cf	100	69.717	ENSSHAG00000005096	A1CF	100	67.720	Sarcophilus_harrisii
ENSMMOG00000009422	a1cf	100	73.927	ENSSFOG00015011774	a1cf	93	81.238	Scleropages_formosus
ENSMMOG00000009422	a1cf	100	76.461	ENSSMAG00000013271	a1cf	100	76.299	Scophthalmus_maximus
ENSMMOG00000009422	a1cf	100	78.125	ENSSDUG00000013930	a1cf	100	77.504	Seriola_dumerili
ENSMMOG00000009422	a1cf	100	71.833	ENSSLDG00000004290	a1cf	100	71.048	Seriola_lalandi_dorsalis
ENSMMOG00000009422	a1cf	95	62.238	ENSSARG00000005940	A1CF	88	64.650	Sorex_araneus
ENSMMOG00000009422	a1cf	96	66.895	ENSSPUG00000006797	A1CF	95	65.679	Sphenodon_punctatus
ENSMMOG00000009422	a1cf	100	70.049	ENSSSCG00000010431	A1CF	100	67.921	Sus_scrofa
ENSMMOG00000009422	a1cf	100	68.627	ENSTGUG00000005090	A1CF	100	67.157	Taeniopygia_guttata
ENSMMOG00000009422	a1cf	100	75.407	ENSTRUG00000001982	a1cf	100	75.081	Takifugu_rubripes
ENSMMOG00000009422	a1cf	100	74.838	ENSTNIG00000003580	a1cf	100	74.351	Tetraodon_nigroviridis
ENSMMOG00000009422	a1cf	95	66.084	ENSTTRG00000013190	A1CF	87	67.675	Tursiops_truncatus
ENSMMOG00000009422	a1cf	100	70.333	ENSUAMG00000020065	A1CF	100	68.386	Ursus_americanus
ENSMMOG00000009422	a1cf	100	69.637	ENSUMAG00000011162	A1CF	100	67.488	Ursus_maritimus
ENSMMOG00000009422	a1cf	88	72.106	ENSVPAG00000006130	A1CF	86	70.968	Vicugna_pacos
ENSMMOG00000009422	a1cf	100	70.284	ENSVVUG00000002504	A1CF	99	69.597	Vulpes_vulpes
ENSMMOG00000009422	a1cf	100	63.516	ENSXETG00000006611	a1cf	100	62.687	Xenopus_tropicalis
ENSMMOG00000009422	a1cf	100	77.393	ENSXCOG00000003302	a1cf	100	77.063	Xiphophorus_couchianus
ENSMMOG00000009422	a1cf	100	76.384	ENSXMAG00000016703	a1cf	100	76.059	Xiphophorus_maculatus