EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000009716 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1
Alias: a2bp1|zgc:103635
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 44822 bases
Position: chrKV751337.1:3679517-3724338
Accession: ZDB-GENE-040927-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000012645	Fox-1_C	PF12414.8	3.6e-26	1	2
ENSMMOP00000012645	Fox-1_C	PF12414.8	3.6e-26	2	2
ENSMMOP00000012645	RRM_1	PF00076.22	9.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000012855	-	1023	-	ENSMMOP00000012645	340 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000009716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000009716's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000009716	rbfox1	81	53.488	ENSMMOG00000016530	rbfox1l	79	53.488
ENSMMOG00000009716	rbfox1	86	66.337	ENSMMOG00000020193	rbfox3b	84	65.894

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000009716	rbfox1	86	77.885	ENSG00000078328	RBFOX1	88	76.331	Homo_sapiens
ENSMMOG00000009716	rbfox1	86	83.486	ENSAPOG00000003197	rbfox1	84	85.627	Acanthochromis_polyacanthus
ENSMMOG00000009716	rbfox1	60	78.744	ENSAMEG00000008605	RBFOX1	82	78.744	Ailuropoda_melanoleuca
ENSMMOG00000009716	rbfox1	70	69.965	ENSACIG00000005478	rbfox1	71	69.965	Amphilophus_citrinellus
ENSMMOG00000009716	rbfox1	69	86.614	ENSAOCG00000008283	rbfox1	90	88.593	Amphiprion_ocellaris
ENSMMOG00000009716	rbfox1	86	80.000	ENSAPEG00000010636	rbfox1	88	80.645	Amphiprion_percula
ENSMMOG00000009716	rbfox1	69	84.375	ENSATEG00000007513	rbfox1	90	85.283	Anabas_testudineus
ENSMMOG00000009716	rbfox1	86	71.976	ENSAPLG00000013263	RBFOX1	84	72.566	Anas_platyrhynchos
ENSMMOG00000009716	rbfox1	86	69.006	ENSACAG00000004013	RBFOX1	85	69.298	Anolis_carolinensis
ENSMMOG00000009716	rbfox1	86	78.526	ENSANAG00000029527	RBFOX1	84	77.673	Aotus_nancymaae
ENSMMOG00000009716	rbfox1	60	81.643	ENSAMXG00000002431	rbfox1	60	81.643	Astyanax_mexicanus
ENSMMOG00000009716	rbfox1	86	70.588	ENSBTAG00000007210	RBFOX1	85	71.176	Bos_taurus
ENSMMOG00000009716	rbfox1	86	77.955	ENSCJAG00000017351	RBFOX1	83	76.087	Callithrix_jacchus
ENSMMOG00000009716	rbfox1	86	71.471	ENSCAFG00000019082	RBFOX1	82	71.098	Canis_familiaris
ENSMMOG00000009716	rbfox1	67	72.481	ENSCAFG00020024881	RBFOX1	76	70.221	Canis_lupus_dingo
ENSMMOG00000009716	rbfox1	86	70.882	ENSCHIG00000023549	RBFOX1	85	71.471	Capra_hircus
ENSMMOG00000009716	rbfox1	86	78.205	ENSTSYG00000005334	RBFOX1	88	77.358	Carlito_syrichta
ENSMMOG00000009716	rbfox1	86	71.681	ENSCAPG00000017669	RBFOX1	88	71.304	Cavia_aperea
ENSMMOG00000009716	rbfox1	86	71.681	ENSCPOG00000011314	RBFOX1	88	71.304	Cavia_porcellus
ENSMMOG00000009716	rbfox1	86	78.526	ENSCCAG00000023031	RBFOX1	84	77.673	Cebus_capucinus
ENSMMOG00000009716	rbfox1	86	77.885	ENSCATG00000033816	RBFOX1	84	77.044	Cercocebus_atys
ENSMMOG00000009716	rbfox1	86	71.386	ENSCLAG00000012761	RBFOX1	86	71.014	Chinchilla_lanigera
ENSMMOG00000009716	rbfox1	80	69.470	ENSCSAG00000008739	RBFOX1	85	69.782	Chlorocebus_sabaeus
ENSMMOG00000009716	rbfox1	62	84.000	ENSCHOG00000012843	RBFOX1	51	84.000	Choloepus_hoffmanni
ENSMMOG00000009716	rbfox1	86	79.167	ENSCPBG00000026626	RBFOX1	85	72.941	Chrysemys_picta_bellii
ENSMMOG00000009716	rbfox1	86	77.885	ENSCANG00000033125	RBFOX1	84	77.044	Colobus_angolensis_palliatus
ENSMMOG00000009716	rbfox1	86	70.501	ENSCGRG00001013729	Rbfox1	86	70.145	Cricetulus_griseus_chok1gshd
ENSMMOG00000009716	rbfox1	86	70.501	ENSCGRG00000003272	Rbfox1	86	70.145	Cricetulus_griseus_crigri
ENSMMOG00000009716	rbfox1	86	74.545	ENSCSEG00000008840	rbfox1	89	75.455	Cynoglossus_semilaevis
ENSMMOG00000009716	rbfox1	86	77.955	ENSDARG00000014746	rbfox1	100	80.193	Danio_rerio
ENSMMOG00000009716	rbfox1	86	71.681	ENSDNOG00000043612	RBFOX1	83	71.014	Dasypus_novemcinctus
ENSMMOG00000009716	rbfox1	86	70.175	ENSDORG00000010024	Rbfox1	87	70.468	Dipodomys_ordii
ENSMMOG00000009716	rbfox1	86	59.118	ENSETEG00000003771	RBFOX1	82	58.960	Echinops_telfairi
ENSMMOG00000009716	rbfox1	86	72.360	ENSEASG00005011599	RBFOX1	86	71.098	Equus_asinus_asinus
ENSMMOG00000009716	rbfox1	86	72.671	ENSECAG00000012667	RBFOX1	85	70.093	Equus_caballus
ENSMMOG00000009716	rbfox1	86	77.885	ENSFCAG00000025322	RBFOX1	76	78.526	Felis_catus
ENSMMOG00000009716	rbfox1	78	71.565	ENSFALG00000004027	RBFOX1	93	71.885	Ficedula_albicollis
ENSMMOG00000009716	rbfox1	86	71.386	ENSFDAG00000007388	RBFOX1	86	71.014	Fukomys_damarensis
ENSMMOG00000009716	rbfox1	86	71.765	ENSGALG00000034325	RBFOX1	84	70.405	Gallus_gallus
ENSMMOG00000009716	rbfox1	86	78.914	ENSGAGG00000023681	RBFOX1	89	72.861	Gopherus_agassizii
ENSMMOG00000009716	rbfox1	86	77.885	ENSGGOG00000016871	-	88	75.466	Gorilla_gorilla
ENSMMOG00000009716	rbfox1	86	71.386	ENSHGLG00000016944	RBFOX1	86	71.014	Heterocephalus_glaber_female
ENSMMOG00000009716	rbfox1	86	71.386	ENSHGLG00100003272	RBFOX1	86	71.014	Heterocephalus_glaber_male
ENSMMOG00000009716	rbfox1	93	79.882	ENSHCOG00000016419	rbfox1	98	80.473	Hippocampus_comes
ENSMMOG00000009716	rbfox1	86	83.390	ENSIPUG00000015215	rbfox1	89	79.487	Ictalurus_punctatus
ENSMMOG00000009716	rbfox1	86	71.976	ENSSTOG00000000322	RBFOX1	87	71.304	Ictidomys_tridecemlineatus
ENSMMOG00000009716	rbfox1	86	71.940	ENSJJAG00000002575	Rbfox1	86	71.554	Jaculus_jaculus
ENSMMOG00000009716	rbfox1	86	83.077	ENSLBEG00000014659	rbfox1	91	82.317	Labrus_bergylta
ENSMMOG00000009716	rbfox1	86	71.930	ENSLOCG00000006675	rbfox1	85	72.515	Lepisosteus_oculatus
ENSMMOG00000009716	rbfox1	66	73.606	ENSLAFG00000011480	RBFOX1	87	74.349	Loxodonta_africana
ENSMMOG00000009716	rbfox1	86	77.885	ENSMFAG00000036447	RBFOX1	84	77.044	Macaca_fascicularis
ENSMMOG00000009716	rbfox1	86	77.885	ENSMMUG00000003458	RBFOX1	84	77.044	Macaca_mulatta
ENSMMOG00000009716	rbfox1	100	64.706	ENSMNEG00000032034	RBFOX1	93	64.973	Macaca_nemestrina
ENSMMOG00000009716	rbfox1	86	77.885	ENSMLEG00000015382	RBFOX1	84	77.044	Mandrillus_leucophaeus
ENSMMOG00000009716	rbfox1	86	79.077	ENSMAMG00000003142	rbfox1	90	83.908	Mastacembelus_armatus
ENSMMOG00000009716	rbfox1	71	74.908	ENSMGAG00000008606	RBFOX1	92	74.908	Meleagris_gallopavo
ENSMMOG00000009716	rbfox1	86	77.564	ENSMICG00000034286	RBFOX1	84	76.730	Microcebus_murinus
ENSMMOG00000009716	rbfox1	86	70.796	ENSMOCG00000020932	Rbfox1	89	70.435	Microtus_ochrogaster
ENSMMOG00000009716	rbfox1	80	70.093	ENSMODG00000005826	RBFOX1	90	70.405	Monodelphis_domestica
ENSMMOG00000009716	rbfox1	86	82.243	ENSMALG00000003337	rbfox1	84	82.866	Monopterus_albus
ENSMMOG00000009716	rbfox1	100	59.850	MGP_CAROLIEiJ_G0020427	Rbfox1	86	70.435	Mus_caroli
ENSMMOG00000009716	rbfox1	86	72.586	ENSMUSG00000008658	Rbfox1	93	73.529	Mus_musculus
ENSMMOG00000009716	rbfox1	86	70.796	MGP_PahariEiJ_G0016135	Rbfox1	86	70.435	Mus_pahari
ENSMMOG00000009716	rbfox1	100	59.850	MGP_SPRETEiJ_G0021321	Rbfox1	86	70.435	Mus_spretus
ENSMMOG00000009716	rbfox1	80	69.159	ENSMPUG00000014822	RBFOX1	81	69.470	Mustela_putorius_furo
ENSMMOG00000009716	rbfox1	66	73.881	ENSMLUG00000015896	RBFOX1	87	74.627	Myotis_lucifugus
ENSMMOG00000009716	rbfox1	86	71.091	ENSNGAG00000023276	Rbfox1	88	70.725	Nannospalax_galili
ENSMMOG00000009716	rbfox1	86	62.899	ENSNBRG00000011084	rbfox1	81	62.899	Neolamprologus_brichardi
ENSMMOG00000009716	rbfox1	86	77.564	ENSNLEG00000010017	-	84	76.730	Nomascus_leucogenys
ENSMMOG00000009716	rbfox1	67	84.000	ENSMEUG00000012525	RBFOX1	55	84.000	Notamacropus_eugenii
ENSMMOG00000009716	rbfox1	86	71.681	ENSODEG00000013166	RBFOX1	87	71.304	Octodon_degus
ENSMMOG00000009716	rbfox1	80	70.093	ENSOANG00000002379	RBFOX1	85	70.405	Ornithorhynchus_anatinus
ENSMMOG00000009716	rbfox1	60	80.193	ENSOCUG00000001205	-	91	80.193	Oryctolagus_cuniculus
ENSMMOG00000009716	rbfox1	86	71.091	ENSOGAG00000025535	RBFOX1	86	70.725	Otolemur_garnettii
ENSMMOG00000009716	rbfox1	60	68.116	ENSOARG00000005135	RBFOX1	79	68.116	Ovis_aries
ENSMMOG00000009716	rbfox1	86	77.885	ENSPPAG00000036238	-	88	77.044	Pan_paniscus
ENSMMOG00000009716	rbfox1	86	78.205	ENSPPRG00000006546	RBFOX1	84	77.358	Panthera_pardus
ENSMMOG00000009716	rbfox1	86	65.409	ENSPTIG00000021154	RBFOX1	85	64.465	Panthera_tigris_altaica
ENSMMOG00000009716	rbfox1	86	77.885	ENSPTRG00000007744	RBFOX1	84	77.044	Pan_troglodytes
ENSMMOG00000009716	rbfox1	86	77.885	ENSPANG00000026500	RBFOX1	84	77.044	Papio_anubis
ENSMMOG00000009716	rbfox1	69	84.100	ENSPKIG00000019353	rbfox1	83	82.490	Paramormyrops_kingsleyae
ENSMMOG00000009716	rbfox1	86	75.159	ENSPKIG00000009667	-	87	78.344	Paramormyrops_kingsleyae
ENSMMOG00000009716	rbfox1	86	72.566	ENSPSIG00000006523	RBFOX1	84	73.156	Pelodiscus_sinensis
ENSMMOG00000009716	rbfox1	86	70.796	ENSPEMG00000017607	Rbfox1	86	70.435	Peromyscus_maniculatus_bairdii
ENSMMOG00000009716	rbfox1	61	74.590	ENSPCIG00000026887	RBFOX1	86	77.459	Phascolarctos_cinereus
ENSMMOG00000009716	rbfox1	80	69.470	ENSPPYG00000007079	-	81	69.782	Pongo_abelii
ENSMMOG00000009716	rbfox1	86	65.588	ENSPCAG00000002630	RBFOX1	89	66.176	Procavia_capensis
ENSMMOG00000009716	rbfox1	86	77.885	ENSPCOG00000025687	RBFOX1	84	77.044	Propithecus_coquereli
ENSMMOG00000009716	rbfox1	86	66.862	ENSPVAG00000013467	RBFOX1	82	67.052	Pteropus_vampyrus
ENSMMOG00000009716	rbfox1	86	75.227	ENSPNAG00000023109	rbfox1	89	76.133	Pygocentrus_nattereri
ENSMMOG00000009716	rbfox1	86	70.501	ENSRNOG00000002827	Rbfox1	85	68.634	Rattus_norvegicus
ENSMMOG00000009716	rbfox1	86	77.885	ENSRBIG00000044478	RBFOX1	88	77.044	Rhinopithecus_bieti
ENSMMOG00000009716	rbfox1	86	77.885	ENSRROG00000044411	RBFOX1	84	77.044	Rhinopithecus_roxellana
ENSMMOG00000009716	rbfox1	86	78.846	ENSSBOG00000033726	RBFOX1	84	77.987	Saimiri_boliviensis_boliviensis
ENSMMOG00000009716	rbfox1	86	71.976	ENSSHAG00000009257	RBFOX1	89	76.949	Sarcophilus_harrisii
ENSMMOG00000009716	rbfox1	86	72.542	ENSSFOG00015023675	rbfox1	82	71.864	Scleropages_formosus
ENSMMOG00000009716	rbfox1	94	69.688	ENSSFOG00015009955	-	88	70.255	Scleropages_formosus
ENSMMOG00000009716	rbfox1	86	80.982	ENSSMAG00000015505	rbfox1	91	83.180	Scophthalmus_maximus
ENSMMOG00000009716	rbfox1	86	93.197	ENSSDUG00000016413	rbfox1	84	93.197	Seriola_dumerili
ENSMMOG00000009716	rbfox1	93	87.385	ENSSLDG00000009353	rbfox1	97	87.385	Seriola_lalandi_dorsalis
ENSMMOG00000009716	rbfox1	88	77.812	ENSSPUG00000009732	RBFOX1	90	78.438	Sphenodon_punctatus
ENSMMOG00000009716	rbfox1	86	93.197	ENSSPAG00000009723	rbfox1	85	93.878	Stegastes_partitus
ENSMMOG00000009716	rbfox1	95	66.307	ENSSSCG00000007917	RBFOX1	90	69.470	Sus_scrofa
ENSMMOG00000009716	rbfox1	86	72.271	ENSTGUG00000004562	RBFOX1	88	71.884	Taeniopygia_guttata
ENSMMOG00000009716	rbfox1	86	82.154	ENSTRUG00000020940	rbfox1	91	84.356	Takifugu_rubripes
ENSMMOG00000009716	rbfox1	66	63.066	ENSTNIG00000002567	rbfox1	100	63.066	Tetraodon_nigroviridis
ENSMMOG00000009716	rbfox1	86	70.882	ENSTTRG00000005700	RBFOX1	81	71.471	Tursiops_truncatus
ENSMMOG00000009716	rbfox1	86	77.303	ENSUAMG00000024633	RBFOX1	88	77.303	Ursus_americanus
ENSMMOG00000009716	rbfox1	86	69.707	ENSUMAG00000003579	RBFOX1	84	67.302	Ursus_maritimus
ENSMMOG00000009716	rbfox1	66	73.234	ENSVPAG00000001284	RBFOX1	64	73.978	Vicugna_pacos
ENSMMOG00000009716	rbfox1	86	78.205	ENSVVUG00000017311	RBFOX1	76	78.846	Vulpes_vulpes