EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000009793 (Gene tree)
Gene ID: -
Gene Symbol: srsf5a
Alias: fb49e01|im:6906390|sfrs5|sfrs5a|wu:fb49e01|wu:fj09b12
Full Name: serine/arginine-rich splicing factor 5a
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 3982 bases
Position: chrKV751360.1:640604-644585
Accession: ZDB-GENE-030131-7336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000012751	RRM_1	PF00076.22	3.9e-33	1	2
ENSMMOP00000012751	RRM_1	PF00076.22	3.9e-33	2	2
ENSMMOP00000012751	RRM_3	PF08777.11	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000012962	-	885	-	ENSMMOP00000012751	294 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000009793's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000009793's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000009793	srsf5a	61	70.588	ENSMMOG00000000137	srsf5b	93	59.231
ENSMMOG00000009793	srsf5a	57	46.243	ENSMMOG00000018849	-	67	45.665
ENSMMOG00000009793	srsf5a	57	46.243	ENSMMOG00000014354	srsf1a	71	44.509
ENSMMOG00000009793	srsf5a	61	41.579	ENSMMOG00000009349	srsf9	71	42.932

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000009793	srsf5a	100	88.926	ENSAPOG00000017395	srsf5a	100	88.926	Acanthochromis_polyacanthus
ENSMMOG00000009793	srsf5a	90	80.669	ENSACIG00000011892	srsf5a	98	85.294	Amphilophus_citrinellus
ENSMMOG00000009793	srsf5a	78	86.441	ENSAOCG00000014967	srsf5a	100	89.369	Amphiprion_ocellaris
ENSMMOG00000009793	srsf5a	78	86.441	ENSAPEG00000009297	srsf5a	100	89.037	Amphiprion_percula
ENSMMOG00000009793	srsf5a	78	92.405	ENSATEG00000000198	srsf5a	100	86.711	Anabas_testudineus
ENSMMOG00000009793	srsf5a	61	80.220	ENSAPLG00000002469	-	70	79.121	Anas_platyrhynchos
ENSMMOG00000009793	srsf5a	61	80.110	ENSACAG00000029015	-	68	77.778	Anolis_carolinensis
ENSMMOG00000009793	srsf5a	78	90.795	ENSACLG00000027166	srsf5a	100	87.541	Astatotilapia_calliptera
ENSMMOG00000009793	srsf5a	61	76.243	ENSAMXG00000030476	srsf5a	67	85.946	Astyanax_mexicanus
ENSMMOG00000009793	srsf5a	61	82.320	ENSCPBG00000021518	-	70	81.215	Chrysemys_picta_bellii
ENSMMOG00000009793	srsf5a	81	45.490	ENSCSAVG00000011376	-	78	55.102	Ciona_savignyi
ENSMMOG00000009793	srsf5a	78	87.654	ENSCSEG00000008109	srsf5a	78	87.243	Cynoglossus_semilaevis
ENSMMOG00000009793	srsf5a	77	77.366	ENSCVAG00000016982	srsf5a	96	76.692	Cyprinodon_variegatus
ENSMMOG00000009793	srsf5a	61	89.730	ENSDARG00000029818	srsf5a	100	85.714	Danio_rerio
ENSMMOG00000009793	srsf5a	61	81.443	ENSELUG00000020439	srsf5a	62	82.383	Esox_lucius
ENSMMOG00000009793	srsf5a	61	80.000	ENSFALG00000005098	-	64	79.444	Ficedula_albicollis
ENSMMOG00000009793	srsf5a	79	75.194	ENSFHEG00000003955	srsf5a	97	70.345	Fundulus_heteroclitus
ENSMMOG00000009793	srsf5a	61	90.000	ENSGMOG00000000869	srsf5a	94	90.000	Gadus_morhua
ENSMMOG00000009793	srsf5a	61	80.000	ENSGALG00000033259	SRSF5A	63	78.889	Gallus_gallus
ENSMMOG00000009793	srsf5a	79	74.583	ENSGAFG00000018237	srsf5a	54	78.333	Gambusia_affinis
ENSMMOG00000009793	srsf5a	61	94.444	ENSGACG00000011761	srsf5a	100	83.333	Gasterosteus_aculeatus
ENSMMOG00000009793	srsf5a	61	82.320	ENSGAGG00000007312	-	70	81.215	Gopherus_agassizii
ENSMMOG00000009793	srsf5a	78	90.756	ENSHBUG00000014048	srsf5a	100	87.500	Haplochromis_burtoni
ENSMMOG00000009793	srsf5a	61	88.710	ENSHCOG00000017557	srsf5a	62	88.710	Hippocampus_comes
ENSMMOG00000009793	srsf5a	61	85.864	ENSIPUG00000003439	srsf5a	69	83.684	Ictalurus_punctatus
ENSMMOG00000009793	srsf5a	61	82.979	ENSKMAG00000014937	srsf5a	58	82.979	Kryptolebias_marmoratus
ENSMMOG00000009793	srsf5a	77	85.062	ENSLBEG00000017153	srsf5a	91	83.817	Labrus_bergylta
ENSMMOG00000009793	srsf5a	61	83.889	ENSLACG00000017874	-	70	83.889	Latimeria_chalumnae
ENSMMOG00000009793	srsf5a	100	62.583	ENSLOCG00000014075	srsf5a	61	85.946	Lepisosteus_oculatus
ENSMMOG00000009793	srsf5a	100	86.102	ENSMAMG00000000192	srsf5a	100	85.763	Mastacembelus_armatus
ENSMMOG00000009793	srsf5a	78	91.176	ENSMZEG00005010485	srsf5a	100	87.829	Maylandia_zebra
ENSMMOG00000009793	srsf5a	66	77.835	ENSMGAG00000011888	-	96	79.630	Meleagris_gallopavo
ENSMMOG00000009793	srsf5a	100	82.993	ENSMALG00000021194	srsf5a	79	82.969	Monopterus_albus
ENSMMOG00000009793	srsf5a	78	91.561	ENSNBRG00000000771	srsf5a	100	88.119	Neolamprologus_brichardi
ENSMMOG00000009793	srsf5a	78	91.561	ENSONIG00000019583	srsf5a	100	88.119	Oreochromis_niloticus
ENSMMOG00000009793	srsf5a	77	89.474	ENSORLG00000009268	srsf5a	100	80.339	Oryzias_latipes
ENSMMOG00000009793	srsf5a	77	89.474	ENSORLG00020003281	srsf5	100	80.339	Oryzias_latipes_hni
ENSMMOG00000009793	srsf5a	77	89.474	ENSORLG00015023075	srsf5	100	80.339	Oryzias_latipes_hsok
ENSMMOG00000009793	srsf5a	77	88.106	ENSOMEG00000000628	srsf5a	100	80.952	Oryzias_melastigma
ENSMMOG00000009793	srsf5a	61	87.166	ENSPKIG00000002054	srsf5a	68	86.559	Paramormyrops_kingsleyae
ENSMMOG00000009793	srsf5a	61	81.768	ENSPSIG00000008238	-	69	77.901	Pelodiscus_sinensis
ENSMMOG00000009793	srsf5a	62	82.258	ENSPMGG00000020125	srsf5a	55	81.421	Periophthalmus_magnuspinnatus
ENSMMOG00000009793	srsf5a	79	76.863	ENSPFOG00000022993	srsf5a	100	67.188	Poecilia_formosa
ENSMMOG00000009793	srsf5a	79	76.772	ENSPLAG00000005508	srsf5a	99	67.085	Poecilia_latipinna
ENSMMOG00000009793	srsf5a	90	73.649	ENSPMEG00000016339	srsf5a	60	83.246	Poecilia_mexicana
ENSMMOG00000009793	srsf5a	90	74.403	ENSPREG00000018091	srsf5a	61	82.812	Poecilia_reticulata
ENSMMOG00000009793	srsf5a	78	91.176	ENSPNYG00000021245	srsf5a	100	87.829	Pundamilia_nyererei
ENSMMOG00000009793	srsf5a	61	86.631	ENSSFOG00015008377	srsf5	66	86.022	Scleropages_formosus
ENSMMOG00000009793	srsf5a	100	77.116	ENSSMAG00000010899	srsf5a	83	83.399	Scophthalmus_maximus
ENSMMOG00000009793	srsf5a	90	86.567	ENSSDUG00000006103	srsf5a	100	88.176	Seriola_dumerili
ENSMMOG00000009793	srsf5a	100	88.176	ENSSLDG00000004146	srsf5a	100	89.189	Seriola_lalandi_dorsalis
ENSMMOG00000009793	srsf5a	61	77.348	ENSSPUG00000002052	-	68	75.556	Sphenodon_punctatus
ENSMMOG00000009793	srsf5a	78	90.948	ENSSPAG00000002821	srsf5a	100	89.226	Stegastes_partitus
ENSMMOG00000009793	srsf5a	61	80.556	ENSTGUG00000011492	-	68	79.444	Taeniopygia_guttata
ENSMMOG00000009793	srsf5a	78	91.286	ENSTRUG00000022908	srsf5a	81	91.250	Takifugu_rubripes
ENSMMOG00000009793	srsf5a	61	79.474	ENSXETG00000017937	srsf5a	72	79.255	Xenopus_tropicalis
ENSMMOG00000009793	srsf5a	90	76.157	ENSXCOG00000015338	srsf5a	61	82.888	Xiphophorus_couchianus
ENSMMOG00000009793	srsf5a	90	74.658	ENSXMAG00000012823	srsf5a	61	82.383	Xiphophorus_maculatus