EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000010216 (Gene tree)
Gene ID: -
Gene Symbol: polr1a
Alias: fa26a03|sb:cb935|wu:fa26a03
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 31833 bases
Position: chrKV751330.1:9018022-9049854
Accession: ZDB-GENE-030131-5286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000013326	RNA_pol_Rpb1_5	PF04998.17	3.9e-100	1	1
ENSMMOP00000013326	RNA_pol_Rpb1_4	PF05000.17	1.4e-21	1	1
ENSMMOP00000013326	RNA_pol_Rpb1_2	PF00623.20	6.4e-69	1	1
ENSMMOP00000013326	RNA_pol_Rpb1_3	PF04983.18	4.1e-37	1	1
ENSMMOP00000013326	RNA_pol_Rpb1_1	PF04997.12	2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000013543	-	4944	-	ENSMMOP00000013326	1647 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000010216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000010216's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000010216	polr1a	70	32.382	ENSMMOG00000013822	polr3a	74	32.185

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000010216	polr1a	100	65.291	ENSG00000068654	POLR1A	100	65.349	Homo_sapiens
ENSMMOG00000010216	polr1a	69	82.027	ENSAPOG00000017945	polr1a	99	82.027	Acanthochromis_polyacanthus
ENSMMOG00000010216	polr1a	100	65.288	ENSAMEG00000005807	POLR1A	100	69.775	Ailuropoda_melanoleuca
ENSMMOG00000010216	polr1a	100	77.156	ENSACIG00000022147	polr1a	100	77.394	Amphilophus_citrinellus
ENSMMOG00000010216	polr1a	100	81.129	ENSAOCG00000017336	polr1a	100	82.046	Amphiprion_ocellaris
ENSMMOG00000010216	polr1a	100	81.129	ENSAPEG00000016105	polr1a	100	80.952	Amphiprion_percula
ENSMMOG00000010216	polr1a	100	82.627	ENSATEG00000016773	polr1a	100	82.273	Anabas_testudineus
ENSMMOG00000010216	polr1a	86	64.929	ENSAPLG00000013871	POLR1A	99	65.531	Anas_platyrhynchos
ENSMMOG00000010216	polr1a	99	63.972	ENSACAG00000012141	POLR1A	99	63.562	Anolis_carolinensis
ENSMMOG00000010216	polr1a	100	64.925	ENSANAG00000033927	POLR1A	100	64.866	Aotus_nancymaae
ENSMMOG00000010216	polr1a	100	78.191	ENSACLG00000020541	polr1a	100	78.125	Astatotilapia_calliptera
ENSMMOG00000010216	polr1a	100	65.308	ENSBTAG00000006481	POLR1A	100	64.959	Bos_taurus
ENSMMOG00000010216	polr1a	98	40.777	WBGene00012999	rpoa-1	77	59.783	Caenorhabditis_elegans
ENSMMOG00000010216	polr1a	100	65.159	ENSCJAG00000019547	POLR1A	100	65.159	Callithrix_jacchus
ENSMMOG00000010216	polr1a	100	65.291	ENSCAFG00000007613	POLR1A	100	65.058	Canis_familiaris
ENSMMOG00000010216	polr1a	100	65.458	ENSCAFG00020014752	POLR1A	100	65.458	Canis_lupus_dingo
ENSMMOG00000010216	polr1a	100	65.015	ENSCHIG00000018204	POLR1A	100	64.678	Capra_hircus
ENSMMOG00000010216	polr1a	100	64.344	ENSTSYG00000002761	POLR1A	100	64.983	Carlito_syrichta
ENSMMOG00000010216	polr1a	97	62.086	ENSCAPG00000010132	POLR1A	99	62.432	Cavia_aperea
ENSMMOG00000010216	polr1a	100	64.644	ENSCPOG00000012350	POLR1A	100	64.977	Cavia_porcellus
ENSMMOG00000010216	polr1a	100	65.661	ENSCCAG00000019839	POLR1A	100	65.797	Cebus_capucinus
ENSMMOG00000010216	polr1a	100	65.099	ENSCATG00000029786	POLR1A	100	65.273	Cercocebus_atys
ENSMMOG00000010216	polr1a	100	64.942	ENSCLAG00000005187	POLR1A	100	64.983	Chinchilla_lanigera
ENSMMOG00000010216	polr1a	100	65.099	ENSCSAG00000016251	POLR1A	100	65.215	Chlorocebus_sabaeus
ENSMMOG00000010216	polr1a	99	65.421	ENSCPBG00000001115	POLR1A	99	65.689	Chrysemys_picta_bellii
ENSMMOG00000010216	polr1a	99	47.329	ENSCSAVG00000007184	-	99	47.124	Ciona_savignyi
ENSMMOG00000010216	polr1a	100	62.391	ENSCANG00000031785	POLR1A	100	62.507	Colobus_angolensis_palliatus
ENSMMOG00000010216	polr1a	100	60.976	ENSCGRG00001006651	Polr1a	100	60.976	Cricetulus_griseus_chok1gshd
ENSMMOG00000010216	polr1a	60	64.133	ENSCGRG00000010834	Polr1a	100	64.133	Cricetulus_griseus_crigri
ENSMMOG00000010216	polr1a	100	74.838	ENSCSEG00000020190	polr1a	100	74.557	Cynoglossus_semilaevis
ENSMMOG00000010216	polr1a	100	78.134	ENSCVAG00000020941	polr1a	100	78.478	Cyprinodon_variegatus
ENSMMOG00000010216	polr1a	100	70.858	ENSDARG00000098375	polr1a	100	70.699	Danio_rerio
ENSMMOG00000010216	polr1a	100	61.698	ENSDNOG00000010829	POLR1A	100	61.977	Dasypus_novemcinctus
ENSMMOG00000010216	polr1a	100	64.723	ENSDORG00000008298	Polr1a	100	64.606	Dipodomys_ordii
ENSMMOG00000010216	polr1a	78	43.806	FBgn0019938	RpI1	99	42.704	Drosophila_melanogaster
ENSMMOG00000010216	polr1a	72	87.500	ENSETEG00000000412	-	72	87.500	Echinops_telfairi
ENSMMOG00000010216	polr1a	90	48.755	ENSEBUG00000005667	-	99	49.003	Eptatretus_burgeri
ENSMMOG00000010216	polr1a	100	65.449	ENSEASG00005001625	POLR1A	100	65.333	Equus_asinus_asinus
ENSMMOG00000010216	polr1a	100	65.449	ENSECAG00000010092	POLR1A	99	70.239	Equus_caballus
ENSMMOG00000010216	polr1a	100	65.449	ENSECAG00000036306	-	99	70.239	Equus_caballus
ENSMMOG00000010216	polr1a	100	65.449	ENSECAG00000030510	-	99	70.239	Equus_caballus
ENSMMOG00000010216	polr1a	85	78.754	ENSEEUG00000000676	POLR1A	83	78.754	Erinaceus_europaeus
ENSMMOG00000010216	polr1a	100	73.063	ENSELUG00000012769	polr1a	99	72.855	Esox_lucius
ENSMMOG00000010216	polr1a	100	65.313	ENSFCAG00000008966	POLR1A	100	65.411	Felis_catus
ENSMMOG00000010216	polr1a	99	63.868	ENSFALG00000010082	POLR1A	99	64.125	Ficedula_albicollis
ENSMMOG00000010216	polr1a	100	65.035	ENSFDAG00000013726	POLR1A	100	65.248	Fukomys_damarensis
ENSMMOG00000010216	polr1a	100	75.149	ENSFHEG00000005996	polr1a	100	74.614	Fundulus_heteroclitus
ENSMMOG00000010216	polr1a	100	68.795	ENSGMOG00000002230	polr1a	100	68.769	Gadus_morhua
ENSMMOG00000010216	polr1a	89	62.010	ENSGALG00000038160	-	98	62.231	Gallus_gallus
ENSMMOG00000010216	polr1a	100	77.327	ENSGAFG00000015266	polr1a	100	77.327	Gambusia_affinis
ENSMMOG00000010216	polr1a	100	77.154	ENSGACG00000018791	polr1a	100	77.328	Gasterosteus_aculeatus
ENSMMOG00000010216	polr1a	89	67.041	ENSGAGG00000004984	-	95	72.165	Gopherus_agassizii
ENSMMOG00000010216	polr1a	100	65.349	ENSGGOG00000001788	POLR1A	100	65.407	Gorilla_gorilla
ENSMMOG00000010216	polr1a	90	79.934	ENSHBUG00000020021	polr1a	99	79.934	Haplochromis_burtoni
ENSMMOG00000010216	polr1a	100	64.750	ENSHGLG00000006334	POLR1A	100	65.423	Heterocephalus_glaber_female
ENSMMOG00000010216	polr1a	100	64.563	ENSHGLG00100006614	POLR1A	100	65.233	Heterocephalus_glaber_male
ENSMMOG00000010216	polr1a	100	74.702	ENSHCOG00000003345	polr1a	100	74.702	Hippocampus_comes
ENSMMOG00000010216	polr1a	100	70.334	ENSIPUG00000013174	polr1a	100	70.129	Ictalurus_punctatus
ENSMMOG00000010216	polr1a	100	64.023	ENSSTOG00000012580	POLR1A	100	64.589	Ictidomys_tridecemlineatus
ENSMMOG00000010216	polr1a	100	64.785	ENSJJAG00000013113	Polr1a	100	64.959	Jaculus_jaculus
ENSMMOG00000010216	polr1a	100	80.567	ENSKMAG00000007399	polr1a	100	80.331	Kryptolebias_marmoratus
ENSMMOG00000010216	polr1a	94	83.000	ENSLBEG00000015401	polr1a	99	82.882	Labrus_bergylta
ENSMMOG00000010216	polr1a	54	70.774	ENSLACG00000003218	polr1a	100	70.774	Latimeria_chalumnae
ENSMMOG00000010216	polr1a	100	69.048	ENSLOCG00000010881	polr1a	100	69.527	Lepisosteus_oculatus
ENSMMOG00000010216	polr1a	100	65.329	ENSLAFG00000014948	POLR1A	100	65.154	Loxodonta_africana
ENSMMOG00000010216	polr1a	100	64.655	ENSMFAG00000046097	POLR1A	100	65.081	Macaca_fascicularis
ENSMMOG00000010216	polr1a	100	64.539	ENSMMUG00000015815	POLR1A	100	64.965	Macaca_mulatta
ENSMMOG00000010216	polr1a	100	64.655	ENSMNEG00000043313	POLR1A	100	65.081	Macaca_nemestrina
ENSMMOG00000010216	polr1a	100	64.750	ENSMLEG00000042428	POLR1A	100	65.003	Mandrillus_leucophaeus
ENSMMOG00000010216	polr1a	100	82.088	ENSMAMG00000016565	polr1a	100	82.028	Mastacembelus_armatus
ENSMMOG00000010216	polr1a	100	80.706	ENSMZEG00005004915	polr1a	100	80.896	Maylandia_zebra
ENSMMOG00000010216	polr1a	99	62.029	ENSMGAG00000013111	POLR1A	99	62.151	Meleagris_gallopavo
ENSMMOG00000010216	polr1a	91	64.553	ENSMAUG00000008497	Polr1a	99	64.971	Mesocricetus_auratus
ENSMMOG00000010216	polr1a	100	65.371	ENSMICG00000000757	POLR1A	100	65.313	Microcebus_murinus
ENSMMOG00000010216	polr1a	100	64.945	ENSMOCG00000000122	Polr1a	100	65.215	Microtus_ochrogaster
ENSMMOG00000010216	polr1a	100	61.079	ENSMODG00000009335	POLR1A	100	61.076	Monodelphis_domestica
ENSMMOG00000010216	polr1a	100	81.593	ENSMALG00000013363	polr1a	100	81.545	Monopterus_albus
ENSMMOG00000010216	polr1a	100	64.381	MGP_CAROLIEiJ_G0028494	Polr1a	100	64.377	Mus_caroli
ENSMMOG00000010216	polr1a	100	64.514	ENSMUSG00000049553	Polr1a	100	64.494	Mus_musculus
ENSMMOG00000010216	polr1a	100	64.505	MGP_PahariEiJ_G0022230	Polr1a	100	64.747	Mus_pahari
ENSMMOG00000010216	polr1a	100	63.185	MGP_SPRETEiJ_G0029499	Polr1a	100	63.522	Mus_spretus
ENSMMOG00000010216	polr1a	100	65.212	ENSMPUG00000009135	POLR1A	100	65.253	Mustela_putorius_furo
ENSMMOG00000010216	polr1a	100	64.934	ENSMLUG00000015723	POLR1A	100	65.087	Myotis_lucifugus
ENSMMOG00000010216	polr1a	100	64.074	ENSNGAG00000017907	Polr1a	100	64.344	Nannospalax_galili
ENSMMOG00000010216	polr1a	100	80.636	ENSNBRG00000000519	polr1a	100	80.719	Neolamprologus_brichardi
ENSMMOG00000010216	polr1a	100	63.295	ENSNLEG00000002264	POLR1A	100	63.353	Nomascus_leucogenys
ENSMMOG00000010216	polr1a	75	85.039	ENSMEUG00000011665	-	75	85.039	Notamacropus_eugenii
ENSMMOG00000010216	polr1a	99	59.432	ENSOPRG00000008269	POLR1A	100	59.680	Ochotona_princeps
ENSMMOG00000010216	polr1a	100	65.583	ENSODEG00000003542	POLR1A	100	65.273	Octodon_degus
ENSMMOG00000010216	polr1a	100	80.094	ENSONIG00000015895	polr1a	100	80.492	Oreochromis_niloticus
ENSMMOG00000010216	polr1a	100	65.521	ENSOCUG00000010138	POLR1A	100	65.405	Oryctolagus_cuniculus
ENSMMOG00000010216	polr1a	100	77.882	ENSORLG00000008753	polr1a	99	77.915	Oryzias_latipes
ENSMMOG00000010216	polr1a	100	76.205	ENSORLG00020020726	polr1a	99	76.190	Oryzias_latipes_hni
ENSMMOG00000010216	polr1a	95	89.362	ENSORLG00015016071	polr1a	98	89.362	Oryzias_latipes_hsok
ENSMMOG00000010216	polr1a	100	64.679	ENSOGAG00000004031	POLR1A	100	64.846	Otolemur_garnettii
ENSMMOG00000010216	polr1a	100	64.835	ENSOARG00000020601	POLR1A	100	64.887	Ovis_aries
ENSMMOG00000010216	polr1a	100	65.058	ENSPPAG00000042450	POLR1A	100	65.116	Pan_paniscus
ENSMMOG00000010216	polr1a	100	65.661	ENSPPRG00000006702	POLR1A	100	65.527	Panthera_pardus
ENSMMOG00000010216	polr1a	100	65.260	ENSPTIG00000018783	POLR1A	100	65.127	Panthera_tigris_altaica
ENSMMOG00000010216	polr1a	100	65.273	ENSPTRG00000012147	POLR1A	100	65.215	Pan_troglodytes
ENSMMOG00000010216	polr1a	100	64.925	ENSPANG00000025908	POLR1A	100	65.099	Papio_anubis
ENSMMOG00000010216	polr1a	100	69.199	ENSPKIG00000005468	polr1a	98	74.306	Paramormyrops_kingsleyae
ENSMMOG00000010216	polr1a	63	64.160	ENSPSIG00000009321	-	99	63.780	Pelodiscus_sinensis
ENSMMOG00000010216	polr1a	55	80.525	ENSPMGG00000009718	polr1a	95	80.525	Periophthalmus_magnuspinnatus
ENSMMOG00000010216	polr1a	100	64.597	ENSPEMG00000022224	Polr1a	100	65.078	Peromyscus_maniculatus_bairdii
ENSMMOG00000010216	polr1a	95	63.843	ENSPCIG00000004222	POLR1A	99	63.804	Phascolarctos_cinereus
ENSMMOG00000010216	polr1a	100	77.732	ENSPFOG00000005025	polr1a	100	77.673	Poecilia_formosa
ENSMMOG00000010216	polr1a	100	77.974	ENSPLAG00000021389	polr1a	100	77.915	Poecilia_latipinna
ENSMMOG00000010216	polr1a	100	75.308	ENSPMEG00000006463	polr1a	100	75.763	Poecilia_mexicana
ENSMMOG00000010216	polr1a	100	77.419	ENSPREG00000002389	polr1a	100	77.465	Poecilia_reticulata
ENSMMOG00000010216	polr1a	100	63.947	ENSPPYG00000012217	POLR1A	100	64.555	Pongo_abelii
ENSMMOG00000010216	polr1a	91	64.798	ENSPCAG00000011582	POLR1A	91	64.798	Procavia_capensis
ENSMMOG00000010216	polr1a	100	65.797	ENSPCOG00000026987	POLR1A	100	65.467	Propithecus_coquereli
ENSMMOG00000010216	polr1a	94	64.741	ENSPVAG00000012674	POLR1A	95	64.889	Pteropus_vampyrus
ENSMMOG00000010216	polr1a	100	80.588	ENSPNYG00000000026	polr1a	100	80.778	Pundamilia_nyererei
ENSMMOG00000010216	polr1a	100	71.068	ENSPNAG00000019223	polr1a	100	70.574	Pygocentrus_nattereri
ENSMMOG00000010216	polr1a	100	64.651	ENSRNOG00000009545	Polr1a	100	64.668	Rattus_norvegicus
ENSMMOG00000010216	polr1a	100	64.750	ENSRBIG00000028335	POLR1A	100	65.215	Rhinopithecus_bieti
ENSMMOG00000010216	polr1a	100	64.750	ENSRROG00000031473	POLR1A	100	65.215	Rhinopithecus_roxellana
ENSMMOG00000010216	polr1a	99	36.087	YOR341W	RPA190	99	36.254	Saccharomyces_cerevisiae
ENSMMOG00000010216	polr1a	100	65.391	ENSSBOG00000030262	POLR1A	100	65.409	Saimiri_boliviensis_boliviensis
ENSMMOG00000010216	polr1a	100	59.306	ENSSHAG00000014739	POLR1A	100	59.086	Sarcophilus_harrisii
ENSMMOG00000010216	polr1a	100	70.337	ENSSFOG00015019716	polr1a	100	70.278	Scleropages_formosus
ENSMMOG00000010216	polr1a	100	81.435	ENSSMAG00000014342	polr1a	100	81.317	Scophthalmus_maximus
ENSMMOG00000010216	polr1a	100	82.176	ENSSDUG00000014631	polr1a	100	82.471	Seriola_dumerili
ENSMMOG00000010216	polr1a	100	79.811	ENSSLDG00000024095	polr1a	100	79.870	Seriola_lalandi_dorsalis
ENSMMOG00000010216	polr1a	69	95.122	ENSSARG00000003136	-	71	95.122	Sorex_araneus
ENSMMOG00000010216	polr1a	95	71.500	ENSSPUG00000004215	POLR1A	98	71.500	Sphenodon_punctatus
ENSMMOG00000010216	polr1a	69	79.548	ENSSPAG00000016341	polr1a	98	79.548	Stegastes_partitus
ENSMMOG00000010216	polr1a	83	66.153	ENSSSCG00000008226	POLR1A	99	66.013	Sus_scrofa
ENSMMOG00000010216	polr1a	99	63.572	ENSTGUG00000010704	POLR1A	100	63.405	Taeniopygia_guttata
ENSMMOG00000010216	polr1a	100	78.916	ENSTRUG00000002210	polr1a	99	78.433	Takifugu_rubripes
ENSMMOG00000010216	polr1a	100	72.775	ENSTNIG00000010116	polr1a	100	72.600	Tetraodon_nigroviridis
ENSMMOG00000010216	polr1a	73	83.186	ENSTBEG00000008646	POLR1A	74	83.186	Tupaia_belangeri
ENSMMOG00000010216	polr1a	100	62.595	ENSTTRG00000008597	POLR1A	100	62.369	Tursiops_truncatus
ENSMMOG00000010216	polr1a	69	66.102	ENSUAMG00000012158	-	94	65.593	Ursus_americanus
ENSMMOG00000010216	polr1a	100	64.822	ENSUMAG00000006700	POLR1A	97	69.116	Ursus_maritimus
ENSMMOG00000010216	polr1a	100	65.233	ENSVVUG00000001245	POLR1A	100	65.000	Vulpes_vulpes
ENSMMOG00000010216	polr1a	100	61.891	ENSXETG00000001952	polr1a	99	63.834	Xenopus_tropicalis
ENSMMOG00000010216	polr1a	100	78.707	ENSXMAG00000004032	polr1a	100	78.800	Xiphophorus_maculatus