EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMMOG00000010492 (Gene tree)
Gene ID
-
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Mola_mola
Status
putative
Strand
Plus strand
Length
16064 bases
Position
chrKV751330.1:10012611-10028674
Accession
7330
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMMOP00000013696RRM_1PF00076.221.3e-3312
ENSMMOP00000013696RRM_1PF00076.221.3e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMMOT00000013919MSI1-201930-ENSMMOP00000013696309 (aa)--
Gene Model
Click here to download ENSMMOG00000010492's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000010492's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMMOG00000010492MSI19685.859ENSMMOG00000012265-9984.488
ENSMMOG00000010492MSI15840.884ENSMMOG00000000540HNRNPA36440.884
ENSMMOG00000010492MSI15135.632ENSMMOG00000001750rbm24b8635.632
ENSMMOG00000010492MSI15634.568ENSMMOG00000004242-9834.568
ENSMMOG00000010492MSI15740.223ENSMMOG00000004241-9739.286
ENSMMOG00000010492MSI15334.118ENSMMOG00000008947-6332.710
ENSMMOG00000010492MSI15748.214ENSMMOG00000008627hnrnpd5248.214
ENSMMOG00000010492MSI15646.154ENSMMOG00000016852-6645.000
ENSMMOG00000010492MSI15453.271ENSMMOG00000004165HNRNPAB5553.271
ENSMMOG00000010492MSI15939.474ENSMMOG00000008251hnrnpa1a8040.000
ENSMMOG00000010492MSI15630.000ENSMMOG00000002363pabpc45430.000
ENSMMOG00000010492MSI16336.224ENSMMOG00000009189tardbpl5236.224
ENSMMOG00000010492MSI19277.828ENSMMOG00000008348msi2a8380.315
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMMOG00000010492MSI19476.316ENSG00000135097MSI19978.879Homo_sapiens
ENSMMOG00000010492MSI19681.957ENSAPOG00000003191MSI19481.957Acanthochromis_polyacanthus
ENSMMOG00000010492MSI19686.018ENSAPOG00000023458-9486.018Acanthochromis_polyacanthus
ENSMMOG00000010492MSI19691.943ENSAMEG00000013302MSI18691.943Ailuropoda_melanoleuca
ENSMMOG00000010492MSI19285.915ENSACIG00000017754-7982.911Amphilophus_citrinellus
ENSMMOG00000010492MSI19888.615ENSAOCG00000009031-9988.923Amphiprion_ocellaris
ENSMMOG00000010492MSI19681.957ENSAOCG00000003804MSI19481.957Amphiprion_ocellaris
ENSMMOG00000010492MSI19686.018ENSAPEG00000006857-7986.018Amphiprion_percula
ENSMMOG00000010492MSI19681.957ENSAPEG00000003245MSI19481.957Amphiprion_percula
ENSMMOG00000010492MSI19691.246ENSATEG00000017059MSI19585.489Anabas_testudineus
ENSMMOG00000010492MSI19678.723ENSATEG00000023779-9378.723Anabas_testudineus
ENSMMOG00000010492MSI19676.218ENSACAG00000002762MSI19776.218Anolis_carolinensis
ENSMMOG00000010492MSI19476.316ENSANAG00000027151MSI19876.316Aotus_nancymaae
ENSMMOG00000010492MSI17289.732ENSANAG00000027901-9475.439Aotus_nancymaae
ENSMMOG00000010492MSI19686.585ENSACLG00000000117-10086.544Astatotilapia_calliptera
ENSMMOG00000010492MSI19682.019ENSACLG00000011230MSI19481.763Astatotilapia_calliptera
ENSMMOG00000010492MSI19687.248ENSAMXG00000038960msi17587.248Astyanax_mexicanus
ENSMMOG00000010492MSI19680.745ENSBTAG00000009800MSI110080.745Bos_taurus
ENSMMOG00000010492MSI19879.464ENSCJAG00000008578MSI19876.316Callithrix_jacchus
ENSMMOG00000010492MSI19476.023ENSCAFG00000010283MSI19876.023Canis_familiaris
ENSMMOG00000010492MSI19675.563ENSCAFG00020020585MSI110075.563Canis_lupus_dingo
ENSMMOG00000010492MSI19470.029ENSCHIG00000024304MSI19869.275Capra_hircus
ENSMMOG00000010492MSI19675.229ENSTSYG00000033949MSI19575.229Carlito_syrichta
ENSMMOG00000010492MSI19666.773ENSCAPG00000003919MSI18966.773Cavia_aperea
ENSMMOG00000010492MSI19476.316ENSCPOG00000012361MSI110076.316Cavia_porcellus
ENSMMOG00000010492MSI19476.316ENSCCAG00000035567MSI19876.316Cebus_capucinus
ENSMMOG00000010492MSI19478.614ENSCATG00000030019MSI19878.614Cercocebus_atys
ENSMMOG00000010492MSI19476.316ENSCLAG00000011329MSI110076.316Chinchilla_lanigera
ENSMMOG00000010492MSI17292.411ENSCSAG00000002265MSI17792.411Chlorocebus_sabaeus
ENSMMOG00000010492MSI19483.974ENSCPBG00000011349MSI19879.154Chrysemys_picta_bellii
ENSMMOG00000010492MSI19675.305ENSCANG00000040651MSI110075.305Colobus_angolensis_palliatus
ENSMMOG00000010492MSI19476.316ENSCGRG00001018883Msi19876.316Cricetulus_griseus_chok1gshd
ENSMMOG00000010492MSI19675.380ENSCGRG00000002191Msi17275.380Cricetulus_griseus_crigri
ENSMMOG00000010492MSI19680.793ENSCSEG00000005834-9480.793Cynoglossus_semilaevis
ENSMMOG00000010492MSI19690.939ENSCSEG00000008352-9490.939Cynoglossus_semilaevis
ENSMMOG00000010492MSI19687.622ENSCSEG00000011032MSI110087.622Cynoglossus_semilaevis
ENSMMOG00000010492MSI19691.586ENSCVAG00000009100MSI19491.586Cyprinodon_variegatus
ENSMMOG00000010492MSI15856.944ENSCVAG00000017463-8956.944Cyprinodon_variegatus
ENSMMOG00000010492MSI15165.179ENSCVAG00000017430zgc:1107967865.179Cyprinodon_variegatus
ENSMMOG00000010492MSI19687.838ENSDARG00000010710msi19987.838Danio_rerio
ENSMMOG00000010492MSI17774.419ENSDARG00000102015CABZ01037298.19874.419Danio_rerio
ENSMMOG00000010492MSI19675.786ENSDNOG00000005713MSI19176.101Dasypus_novemcinctus
ENSMMOG00000010492MSI19674.850ENSDORG00000005610Msi19474.850Dipodomys_ordii
ENSMMOG00000010492MSI19675.000ENSETEG00000004756MSI110075.000Echinops_telfairi
ENSMMOG00000010492MSI19480.805ENSEASG00005004736MSI19880.805Equus_asinus_asinus
ENSMMOG00000010492MSI19879.167ENSECAG00000017526MSI19876.316Equus_caballus
ENSMMOG00000010492MSI19682.500ENSELUG00000023280-10082.500Esox_lucius
ENSMMOG00000010492MSI19282.911ENSELUG00000023219MSI19477.285Esox_lucius
ENSMMOG00000010492MSI19879.464ENSFCAG00000011007MSI19876.316Felis_catus
ENSMMOG00000010492MSI19679.000ENSFALG00000007574MSI110079.000Ficedula_albicollis
ENSMMOG00000010492MSI19675.000ENSFDAG00000019586MSI110075.000Fukomys_damarensis
ENSMMOG00000010492MSI19683.226ENSFHEG00000003560-9783.226Fundulus_heteroclitus
ENSMMOG00000010492MSI19986.711ENSFHEG00000022446MSI19486.018Fundulus_heteroclitus
ENSMMOG00000010492MSI19672.289ENSGMOG00000017838-9472.289Gadus_morhua
ENSMMOG00000010492MSI19685.276ENSGMOG00000001006MSI19485.276Gadus_morhua
ENSMMOG00000010492MSI19393.304ENSGALG00000007227MSI17993.304Gallus_gallus
ENSMMOG00000010492MSI19075.333ENSGAFG00000005860-9075.333Gambusia_affinis
ENSMMOG00000010492MSI19786.859ENSGAFG00000021522MSI19686.859Gambusia_affinis
ENSMMOG00000010492MSI19690.759ENSGACG00000012679MSI19491.089Gasterosteus_aculeatus
ENSMMOG00000010492MSI19973.314ENSGACG00000008674-9470.175Gasterosteus_aculeatus
ENSMMOG00000010492MSI19681.846ENSGAGG00000016037MSI19881.846Gopherus_agassizii
ENSMMOG00000010492MSI19675.478ENSGGOG00000010328MSI110075.478Gorilla_gorilla
ENSMMOG00000010492MSI19681.763ENSHBUG00000021921MSI19481.763Haplochromis_burtoni
ENSMMOG00000010492MSI19686.585ENSHBUG00000011841-9486.585Haplochromis_burtoni
ENSMMOG00000010492MSI19476.023ENSHGLG00000012782MSI19876.023Heterocephalus_glaber_female
ENSMMOG00000010492MSI19675.000ENSHGLG00100016848MSI110075.000Heterocephalus_glaber_male
ENSMMOG00000010492MSI19689.865ENSHCOG00000012067-8989.865Hippocampus_comes
ENSMMOG00000010492MSI19685.016ENSHCOG00000012019MSI110085.016Hippocampus_comes
ENSMMOG00000010492MSI19686.333ENSIPUG00000001976msi19986.333Ictalurus_punctatus
ENSMMOG00000010492MSI19675.563ENSSTOG00000009799MSI110075.563Ictidomys_tridecemlineatus
ENSMMOG00000010492MSI19673.913ENSJJAG00000010643-9473.913Jaculus_jaculus
ENSMMOG00000010492MSI19477.448ENSJJAG00000010463Msi19876.316Jaculus_jaculus
ENSMMOG00000010492MSI19685.993ENSKMAG00000019877-10085.993Kryptolebias_marmoratus
ENSMMOG00000010492MSI19685.933ENSKMAG00000011251MSI19485.933Kryptolebias_marmoratus
ENSMMOG00000010492MSI19686.392ENSLBEG00000001375-9481.707Labrus_bergylta
ENSMMOG00000010492MSI19691.613ENSLBEG00000008789MSI19491.613Labrus_bergylta
ENSMMOG00000010492MSI19477.941ENSLACG00000018287MSI110077.941Latimeria_chalumnae
ENSMMOG00000010492MSI15276.667ENSLOCG00000008618zgc:1107965876.667Lepisosteus_oculatus
ENSMMOG00000010492MSI18974.098ENSLAFG00000009412MSI110074.098Loxodonta_africana
ENSMMOG00000010492MSI19476.316ENSMFAG00000001798MSI110076.316Macaca_fascicularis
ENSMMOG00000010492MSI19476.316ENSMMUG00000031527MSI19776.093Macaca_mulatta
ENSMMOG00000010492MSI19480.805ENSMNEG00000040034MSI19880.805Macaca_nemestrina
ENSMMOG00000010492MSI19675.305ENSMLEG00000003921MSI110075.305Mandrillus_leucophaeus
ENSMMOG00000010492MSI19686.624ENSMAMG00000018426-9786.624Mastacembelus_armatus
ENSMMOG00000010492MSI19686.239ENSMAMG00000002279MSI19486.239Mastacembelus_armatus
ENSMMOG00000010492MSI19691.909ENSMZEG00005000340-9491.909Maylandia_zebra
ENSMMOG00000010492MSI19681.763ENSMZEG00005026892MSI19481.763Maylandia_zebra
ENSMMOG00000010492MSI17495.266ENSMGAG00000016518-10095.266Meleagris_gallopavo
ENSMMOG00000010492MSI17292.411ENSMAUG00000016820Msi19292.411Mesocricetus_auratus
ENSMMOG00000010492MSI19479.573ENSMICG00000033181MSI19879.573Microcebus_murinus
ENSMMOG00000010492MSI19476.023ENSMOCG00000002286Msi19876.023Microtus_ochrogaster
ENSMMOG00000010492MSI18954.518ENSMODG00000003189-10054.518Monodelphis_domestica
ENSMMOG00000010492MSI19688.923ENSMALG00000017889MSI19788.923Monopterus_albus
ENSMMOG00000010492MSI19687.213ENSMALG00000001426-10087.213Monopterus_albus
ENSMMOG00000010492MSI19476.023MGP_CAROLIEiJ_G0027626Msi19881.369Mus_caroli
ENSMMOG00000010492MSI19678.086ENSMUSG00000054256Msi19881.369Mus_musculus
ENSMMOG00000010492MSI19478.788MGP_PahariEiJ_G0024206Msi19881.679Mus_pahari
ENSMMOG00000010492MSI19476.023MGP_SPRETEiJ_G0028624Msi19881.369Mus_spretus
ENSMMOG00000010492MSI19675.563ENSMPUG00000003168MSI110075.563Mustela_putorius_furo
ENSMMOG00000010492MSI18966.964ENSMLUG00000010313MSI110064.881Myotis_lucifugus
ENSMMOG00000010492MSI19675.380ENSNGAG00000014508Msi19175.380Nannospalax_galili
ENSMMOG00000010492MSI19691.909ENSNBRG00000000841-9491.909Neolamprologus_brichardi
ENSMMOG00000010492MSI19468.443ENSNBRG00000018012MSI19968.443Neolamprologus_brichardi
ENSMMOG00000010492MSI18965.549ENSNLEG00000015636MSI110065.549Nomascus_leucogenys
ENSMMOG00000010492MSI19655.488ENSMEUG00000015759MSI110055.488Notamacropus_eugenii
ENSMMOG00000010492MSI19267.619ENSOPRG00000016879MSI110067.619Ochotona_princeps
ENSMMOG00000010492MSI19675.305ENSODEG00000006328MSI110075.305Octodon_degus
ENSMMOG00000010492MSI19698.222ENSONIG00000011182MSI19486.585Oreochromis_niloticus
ENSMMOG00000010492MSI19678.363ENSONIG00000019452-9475.510Oreochromis_niloticus
ENSMMOG00000010492MSI19675.563ENSOCUG00000027716MSI110075.563Oryctolagus_cuniculus
ENSMMOG00000010492MSI19691.246ENSORLG00000019978-9391.246Oryzias_latipes
ENSMMOG00000010492MSI19683.801ENSORLG00000029593MSI19983.801Oryzias_latipes
ENSMMOG00000010492MSI19686.322ENSORLG00020001208-6786.322Oryzias_latipes_hni
ENSMMOG00000010492MSI19685.397ENSORLG00020008266MSI19985.397Oryzias_latipes_hni
ENSMMOG00000010492MSI19685.397ENSORLG00015003916MSI19985.397Oryzias_latipes_hsok
ENSMMOG00000010492MSI19691.613ENSORLG00015013672-7191.613Oryzias_latipes_hsok
ENSMMOG00000010492MSI19685.304ENSOMEG00000002272-10085.304Oryzias_melastigma
ENSMMOG00000010492MSI19687.346ENSOMEG00000017536MSI110087.346Oryzias_melastigma
ENSMMOG00000010492MSI19475.652ENSOGAG00000003847MSI19875.652Otolemur_garnettii
ENSMMOG00000010492MSI19675.152ENSOARG00000012097MSI110075.152Ovis_aries
ENSMMOG00000010492MSI19675.305ENSPPAG00000043073MSI110075.305Pan_paniscus
ENSMMOG00000010492MSI19476.316ENSPPRG00000000370MSI19876.316Panthera_pardus
ENSMMOG00000010492MSI19675.563ENSPTIG00000008913MSI110075.563Panthera_tigris_altaica
ENSMMOG00000010492MSI19478.614ENSPTRG00000005531MSI19876.316Pan_troglodytes
ENSMMOG00000010492MSI19476.023ENSPANG00000006335MSI19876.023Papio_anubis
ENSMMOG00000010492MSI19487.055ENSPKIG00000016497MSI19487.055Paramormyrops_kingsleyae
ENSMMOG00000010492MSI19482.622ENSPKIG00000023575-9482.622Paramormyrops_kingsleyae
ENSMMOG00000010492MSI17767.544ENSPSIG00000009621-10067.544Pelodiscus_sinensis
ENSMMOG00000010492MSI15484.615ENSPSIG00000016295-9584.615Pelodiscus_sinensis
ENSMMOG00000010492MSI19978.635ENSPSIG00000011608-9478.635Pelodiscus_sinensis
ENSMMOG00000010492MSI19291.216ENSPMGG00000000514MSI19791.216Periophthalmus_magnuspinnatus
ENSMMOG00000010492MSI19673.186ENSPMGG00000007743-9271.617Periophthalmus_magnuspinnatus
ENSMMOG00000010492MSI19672.571ENSPEMG00000010491Msi19872.571Peromyscus_maniculatus_bairdii
ENSMMOG00000010492MSI19696.983ENSPFOG00000013113MSI19486.322Poecilia_formosa
ENSMMOG00000010492MSI19681.098ENSPFOG00000008319-8181.098Poecilia_formosa
ENSMMOG00000010492MSI19695.987ENSPLAG00000014025-9695.987Poecilia_latipinna
ENSMMOG00000010492MSI19781.381ENSPLAG00000012431-9781.381Poecilia_latipinna
ENSMMOG00000010492MSI19783.385ENSPMEG00000007025-9683.385Poecilia_mexicana
ENSMMOG00000010492MSI19691.613ENSPMEG00000012796MSI19491.613Poecilia_mexicana
ENSMMOG00000010492MSI19686.149ENSPREG00000021416-9483.766Poecilia_reticulata
ENSMMOG00000010492MSI17382.673ENSPREG00000014574-10082.673Poecilia_reticulata
ENSMMOG00000010492MSI19475.439ENSPPYG00000005027MSI19875.439Pongo_abelii
ENSMMOG00000010492MSI17594.194ENSPCAG00000002300MSI15794.194Procavia_capensis
ENSMMOG00000010492MSI19480.308ENSPCOG00000017341MSI19880.308Propithecus_coquereli
ENSMMOG00000010492MSI19284.848ENSPVAG00000002225MSI110059.451Pteropus_vampyrus
ENSMMOG00000010492MSI19681.763ENSPNYG00000004379MSI19481.763Pundamilia_nyererei
ENSMMOG00000010492MSI19686.585ENSPNYG00000002529-9486.585Pundamilia_nyererei
ENSMMOG00000010492MSI19684.091ENSPNAG00000019337msi19284.091Pygocentrus_nattereri
ENSMMOG00000010492MSI19675.241ENSRNOG00000001156Msi110075.241Rattus_norvegicus
ENSMMOG00000010492MSI19675.563ENSRBIG00000036889MSI110075.563Rhinopithecus_bieti
ENSMMOG00000010492MSI19675.152ENSRROG00000041076MSI19375.152Rhinopithecus_roxellana
ENSMMOG00000010492MSI19576.149ENSSBOG00000030259MSI19976.149Saimiri_boliviensis_boliviensis
ENSMMOG00000010492MSI19665.359ENSSHAG00000006834MSI110065.359Sarcophilus_harrisii
ENSMMOG00000010492MSI19683.446ENSSFOG00015014964-9981.105Scleropages_formosus
ENSMMOG00000010492MSI19687.379ENSSFOG00015005350MSI110087.379Scleropages_formosus
ENSMMOG00000010492MSI19678.161ENSSMAG00000009156-7178.161Scophthalmus_maximus
ENSMMOG00000010492MSI19690.236ENSSMAG00000018824MSI19790.236Scophthalmus_maximus
ENSMMOG00000010492MSI19686.322ENSSDUG00000001027MSI19486.322Seriola_dumerili
ENSMMOG00000010492MSI19682.051ENSSDUG00000022697-9782.051Seriola_dumerili
ENSMMOG00000010492MSI19691.613ENSSLDG00000016832MSI19491.613Seriola_lalandi_dorsalis
ENSMMOG00000010492MSI19682.051ENSSLDG00000018706-9782.051Seriola_lalandi_dorsalis
ENSMMOG00000010492MSI19479.154ENSSPUG00000015741MSI110079.154Sphenodon_punctatus
ENSMMOG00000010492MSI15099.145ENSSPAG00000015573zgc:1107966099.145Stegastes_partitus
ENSMMOG00000010492MSI19686.452ENSSPAG00000013098-10081.402Stegastes_partitus
ENSMMOG00000010492MSI17397.076ENSSPAG00000014085-10097.076Stegastes_partitus
ENSMMOG00000010492MSI19480.495ENSSSCG00000029365MSI19880.495Sus_scrofa
ENSMMOG00000010492MSI19477.353ENSTGUG00000009534MSI110077.353Taeniopygia_guttata
ENSMMOG00000010492MSI17977.880ENSTRUG00000016249MSI110071.146Takifugu_rubripes
ENSMMOG00000010492MSI15090.909ENSTRUG00000021586-7990.909Takifugu_rubripes
ENSMMOG00000010492MSI19691.367ENSTRUG00000015636-7991.367Takifugu_rubripes
ENSMMOG00000010492MSI19487.500ENSTNIG00000011469MSI19487.500Tetraodon_nigroviridis
ENSMMOG00000010492MSI19662.866ENSTNIG00000019814-9462.866Tetraodon_nigroviridis
ENSMMOG00000010492MSI19671.429ENSTBEG00000007182MSI110071.429Tupaia_belangeri
ENSMMOG00000010492MSI17291.964ENSTTRG00000005663MSI16591.964Tursiops_truncatus
ENSMMOG00000010492MSI18089.474ENSUAMG00000015514MSI19189.474Ursus_americanus
ENSMMOG00000010492MSI19676.510ENSUMAG00000006176MSI18876.510Ursus_maritimus
ENSMMOG00000010492MSI19674.775ENSVVUG00000020993MSI110074.775Vulpes_vulpes
ENSMMOG00000010492MSI19778.550ENSXETG00000012216msi19778.550Xenopus_tropicalis
ENSMMOG00000010492MSI19772.727ENSXCOG00000017605MSI19272.727Xiphophorus_couchianus
ENSMMOG00000010492MSI19987.000ENSXMAG00000027103MSI19087.000Xiphophorus_maculatus
ENSMMOG00000010492MSI19785.266ENSXMAG00000018237-9285.266Xiphophorus_maculatus

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