EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000010696 (Gene tree)
Gene ID: -
Gene Symbol: cirbpa
Alias: -
Full Name: cold inducible RNA binding protein a
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 4658 bases
Position: chrKV751338.1:2965219-2969876
Accession: ZDB-GENE-050417-329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000013963	RRM_1	PF00076.22	2.3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000014189	-	252	-	ENSMMOP00000013963	83 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000010696's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000010696's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000010696	cirbpa	93	41.935	ENSMMOG00000012154	elavl3	59	41.935
ENSMMOG00000010696	cirbpa	77	44.118	ENSMMOG00000001750	rbm24b	52	44.118
ENSMMOG00000010696	cirbpa	94	38.710	ENSMMOG00000008014	-	67	38.710
ENSMMOG00000010696	cirbpa	90	40.323	ENSMMOG00000020264	elavl4	51	40.323
ENSMMOG00000010696	cirbpa	55	52.174	ENSMMOG00000008822	-	73	52.174
ENSMMOG00000010696	cirbpa	90	40.323	ENSMMOG00000012031	ELAVL2	55	40.323
ENSMMOG00000010696	cirbpa	92	40.323	ENSMMOG00000011938	elavl1a	64	40.323
ENSMMOG00000010696	cirbpa	81	31.343	ENSMMOG00000015241	-	55	31.343
ENSMMOG00000010696	cirbpa	57	38.298	ENSMMOG00000013350	-	67	38.298
ENSMMOG00000010696	cirbpa	78	41.270	ENSMMOG00000004241	-	61	41.270
ENSMMOG00000010696	cirbpa	78	48.333	ENSMMOG00000004242	-	76	48.333
ENSMMOG00000010696	cirbpa	87	47.222	ENSMMOG00000008251	hnrnpa1a	51	47.222
ENSMMOG00000010696	cirbpa	73	31.148	ENSMMOG00000008605	-	50	31.148

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000010696	cirbpa	84	82.857	ENSHCOG00000001170	cirbpa	58	82.857	Hippocampus_comes
ENSMMOG00000010696	cirbpa	84	81.429	ENSLBEG00000027731	-	57	81.429	Labrus_bergylta
ENSMMOG00000010696	cirbpa	99	84.337	ENSSDUG00000016099	cirbpa	50	86.250	Seriola_dumerili
ENSMMOG00000010696	cirbpa	84	91.429	ENSTRUG00000010187	cirbpa	51	91.429	Takifugu_rubripes
ENSMMOG00000010696	cirbpa	92	84.211	ENSXCOG00000008262	cirbpa	96	84.211	Xiphophorus_couchianus