EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMMOG00000010868 (Gene tree)
Gene ID
-
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Mola_mola
Status
putative
Strand
Plus strand
Length
35514 bases
Position
chrKV751332.1:8504102-8539615
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMMOP00000014208tRNA_anti-codonPF01336.258.5e-1211
ENSMMOP00000014207tRNA_anti-codonPF01336.251.1e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMMOT00000014437RPA1 (1 of many)-2021650-ENSMMOP00000014208549 (aa)--
ENSMMOT00000014436RPA1 (1 of many)-2011797-ENSMMOP00000014207598 (aa)--
Gene Model
Click here to download ENSMMOG00000010868's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000010868's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMMOG00000010868RPA19663.085ENSMMOG00000014292rpa19963.085
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMMOG00000010868RPA19862.881ENSAPOG00000011658rpa19963.047Acanthochromis_polyacanthus
ENSMMOG00000010868RPA19882.110ENSAPOG00000019409RPA19581.799Acanthochromis_polyacanthus
ENSMMOG00000010868RPA19760.440ENSAMEG00000007706RPA19757.333Ailuropoda_melanoleuca
ENSMMOG00000010868RPA19581.222ENSACIG00000012881RPA110078.741Amphilophus_citrinellus
ENSMMOG00000010868RPA19556.098ENSACIG00000007277rpa19956.098Amphilophus_citrinellus
ENSMMOG00000010868RPA19882.110ENSAOCG00000009003RPA19873.709Amphiprion_ocellaris
ENSMMOG00000010868RPA19862.881ENSAOCG00000023376rpa19963.684Amphiprion_ocellaris
ENSMMOG00000010868RPA19882.569ENSAPEG00000019132RPA19871.713Amphiprion_percula
ENSMMOG00000010868RPA19862.881ENSAPEG00000008634rpa19963.684Amphiprion_percula
ENSMMOG00000010868RPA19882.798ENSATEG00000006443RPA18982.798Anabas_testudineus
ENSMMOG00000010868RPA19462.898ENSATEG00000022024rpa19962.898Anabas_testudineus
ENSMMOG00000010868RPA19749.555ENSAPLG00000012442RPA110049.555Anas_platyrhynchos
ENSMMOG00000010868RPA19754.484ENSACAG00000014490RPA19754.484Anolis_carolinensis
ENSMMOG00000010868RPA19658.854ENSANAG00000023456RPA19858.854Aotus_nancymaae
ENSMMOG00000010868RPA19365.179ENSACLG00000006640rpa19965.179Astatotilapia_calliptera
ENSMMOG00000010868RPA19884.928ENSACLG00000005223RPA19384.928Astatotilapia_calliptera
ENSMMOG00000010868RPA19863.361ENSAMXG00000008418rpa19964.161Astyanax_mexicanus
ENSMMOG00000010868RPA19759.471ENSBTAG00000009711RPA19756.093Bos_taurus
ENSMMOG00000010868RPA17630.024WBGene00017546rpa-16730.444Caenorhabditis_elegans
ENSMMOG00000010868RPA19656.926ENSCJAG00000001848RPA19656.926Callithrix_jacchus
ENSMMOG00000010868RPA19759.341ENSCAFG00000019249RPA19756.260Canis_familiaris
ENSMMOG00000010868RPA19759.341ENSCAFG00020009847RPA19756.260Canis_lupus_dingo
ENSMMOG00000010868RPA19759.471ENSCHIG00000026308RPA19755.927Capra_hircus
ENSMMOG00000010868RPA19759.471ENSTSYG00000003482-9756.167Carlito_syrichta
ENSMMOG00000010868RPA19759.912ENSCPOG00000000035RPA19659.912Cavia_porcellus
ENSMMOG00000010868RPA19647.973ENSCCAG00000010981RPA19647.973Cebus_capucinus
ENSMMOG00000010868RPA19760.793ENSCLAG00000005185-9660.793Chinchilla_lanigera
ENSMMOG00000010868RPA19756.071ENSCLAG00000015045-9656.071Chinchilla_lanigera
ENSMMOG00000010868RPA19751.887ENSCSAG00000013833RPA19746.755Chlorocebus_sabaeus
ENSMMOG00000010868RPA17961.872ENSCHOG00000009454-9963.678Choloepus_hoffmanni
ENSMMOG00000010868RPA19555.973ENSCHOG00000013540-9955.973Choloepus_hoffmanni
ENSMMOG00000010868RPA19861.247ENSCPBG00000020377RPA19956.567Chrysemys_picta_bellii
ENSMMOG00000010868RPA19844.518ENSCING00000023482-9844.518Ciona_intestinalis
ENSMMOG00000010868RPA19758.076ENSCANG00000030911RPA19958.076Colobus_angolensis_palliatus
ENSMMOG00000010868RPA19760.000ENSCGRG00001008197Rpa19755.648Cricetulus_griseus_chok1gshd
ENSMMOG00000010868RPA18160.000ENSCGRG00000000582Rpa19558.025Cricetulus_griseus_crigri
ENSMMOG00000010868RPA19871.101ENSCSEG00000012726RPA19964.726Cynoglossus_semilaevis
ENSMMOG00000010868RPA19860.430ENSCSEG00000013066rpa19761.972Cynoglossus_semilaevis
ENSMMOG00000010868RPA19867.506ENSCVAG00000019431rpa19963.243Cyprinodon_variegatus
ENSMMOG00000010868RPA19481.980ENSCVAG00000013446-9581.980Cyprinodon_variegatus
ENSMMOG00000010868RPA19863.744ENSDARG00000003938rpa19863.744Danio_rerio
ENSMMOG00000010868RPA19761.148ENSDNOG00000017218RPA19756.427Dasypus_novemcinctus
ENSMMOG00000010868RPA19761.798ENSDORG00000006199Rpa19561.798Dipodomys_ordii
ENSMMOG00000010868RPA19839.123FBgn0010173RpA-709739.629Drosophila_melanogaster
ENSMMOG00000010868RPA18161.856ENSETEG00000017608RPA18161.856Echinops_telfairi
ENSMMOG00000010868RPA19757.290ENSEASG00005009372RPA19957.857Equus_asinus_asinus
ENSMMOG00000010868RPA19756.594ENSECAG00000023886RPA19756.594Equus_caballus
ENSMMOG00000010868RPA17663.636ENSEEUG00000002186-6863.636Erinaceus_europaeus
ENSMMOG00000010868RPA18667.400ENSELUG00000006136RPA19967.400Esox_lucius
ENSMMOG00000010868RPA19862.857ENSELUG00000021071rpa19862.857Esox_lucius
ENSMMOG00000010868RPA19761.319ENSFCAG00000006306RPA19756.667Felis_catus
ENSMMOG00000010868RPA19854.918ENSFALG00000006575RPA19854.918Ficedula_albicollis
ENSMMOG00000010868RPA19760.987ENSFDAG00000007720RPA19560.987Fukomys_damarensis
ENSMMOG00000010868RPA19862.375ENSFHEG00000003580rpa19862.375Fundulus_heteroclitus
ENSMMOG00000010868RPA19861.775ENSGMOG00000010382rpa19861.775Gadus_morhua
ENSMMOG00000010868RPA19861.136ENSGALG00000003072RPA19855.132Gallus_gallus
ENSMMOG00000010868RPA19877.324ENSGAFG00000020953RPA19868.210Gambusia_affinis
ENSMMOG00000010868RPA19860.870ENSGAFG00000012916rpa19860.870Gambusia_affinis
ENSMMOG00000010868RPA19861.735ENSGACG00000010856rpa19861.735Gasterosteus_aculeatus
ENSMMOG00000010868RPA19861.024ENSGAGG00000013611RPA19855.281Gopherus_agassizii
ENSMMOG00000010868RPA19757.633ENSGGOG00000014186RPA19757.633Gorilla_gorilla
ENSMMOG00000010868RPA19569.338ENSHBUG00000009348RPA19969.338Haplochromis_burtoni
ENSMMOG00000010868RPA19862.500ENSHBUG00000017773rpa19862.500Haplochromis_burtoni
ENSMMOG00000010868RPA19760.793ENSHGLG00000008846RPA19660.793Heterocephalus_glaber_female
ENSMMOG00000010868RPA19760.793ENSHGLG00100017755-9660.793Heterocephalus_glaber_male
ENSMMOG00000010868RPA19747.157ENSHGLG00100002005-9747.659Heterocephalus_glaber_male
ENSMMOG00000010868RPA19852.152ENSHGLG00100000799-9852.152Heterocephalus_glaber_male
ENSMMOG00000010868RPA19663.221ENSHCOG00000001401rpa19856.833Hippocampus_comes
ENSMMOG00000010868RPA19851.845ENSHCOG00000000351RPA19751.845Hippocampus_comes
ENSMMOG00000010868RPA19864.034ENSIPUG00000004400rpa19864.034Ictalurus_punctatus
ENSMMOG00000010868RPA19558.407ENSSTOG00000022475RPA19953.885Ictidomys_tridecemlineatus
ENSMMOG00000010868RPA19559.692ENSJJAG00000000876Rpa19759.692Jaculus_jaculus
ENSMMOG00000010868RPA19867.277ENSKMAG00000005605rpa19861.167Kryptolebias_marmoratus
ENSMMOG00000010868RPA19874.376ENSKMAG00000000234RPA19874.376Kryptolebias_marmoratus
ENSMMOG00000010868RPA19860.136ENSLBEG00000021604rpa19860.136Labrus_bergylta
ENSMMOG00000010868RPA19783.453ENSLBEG00000002281RPA19965.468Labrus_bergylta
ENSMMOG00000010868RPA18355.794ENSLACG00000007210RPA19855.761Latimeria_chalumnae
ENSMMOG00000010868RPA19861.111ENSLOCG00000006397rpa19861.448Lepisosteus_oculatus
ENSMMOG00000010868RPA19859.692ENSLAFG00000015354RPA19954.634Loxodonta_africana
ENSMMOG00000010868RPA17959.664ENSMFAG00000036138-9954.980Macaca_fascicularis
ENSMMOG00000010868RPA19759.912ENSMMUG00000011604-9955.927Macaca_mulatta
ENSMMOG00000010868RPA19752.189ENSMMUG00000002442-9752.189Macaca_mulatta
ENSMMOG00000010868RPA19753.028ENSMNEG00000029837-9753.028Macaca_nemestrina
ENSMMOG00000010868RPA19560.089ENSMNEG00000031632-9855.782Macaca_nemestrina
ENSMMOG00000010868RPA19757.709ENSMLEG00000038768-9952.492Mandrillus_leucophaeus
ENSMMOG00000010868RPA19861.603ENSMAMG00000017993rpa19963.102Mastacembelus_armatus
ENSMMOG00000010868RPA19683.453ENSMAMG00000020097RPA19970.695Mastacembelus_armatus
ENSMMOG00000010868RPA19884.928ENSMZEG00005024731RPA19384.928Maylandia_zebra
ENSMMOG00000010868RPA19862.500ENSMZEG00005007551rpa19862.500Maylandia_zebra
ENSMMOG00000010868RPA19860.455ENSMGAG00000005315RPA19854.817Meleagris_gallopavo
ENSMMOG00000010868RPA19760.000ENSMAUG00000010474Rpa19956.784Mesocricetus_auratus
ENSMMOG00000010868RPA19757.286ENSMICG00000012867RPA19757.286Microcebus_murinus
ENSMMOG00000010868RPA19759.009ENSMOCG00000013019Rpa19755.444Microtus_ochrogaster
ENSMMOG00000010868RPA19756.856ENSMODG00000010549RPA19756.856Monodelphis_domestica
ENSMMOG00000010868RPA19880.046ENSMALG00000001208RPA19477.016Monopterus_albus
ENSMMOG00000010868RPA19863.203ENSMALG00000011453rpa19863.203Monopterus_albus
ENSMMOG00000010868RPA19760.000MGP_CAROLIEiJ_G0016734Rpa19756.000Mus_caroli
ENSMMOG00000010868RPA19560.444ENSMUSG00000000751Rpa19655.927Mus_musculus
ENSMMOG00000010868RPA19760.667MGP_PahariEiJ_G0017871Rpa19755.887Mus_pahari
ENSMMOG00000010868RPA19560.667MGP_SPRETEiJ_G0017577Rpa19656.000Mus_spretus
ENSMMOG00000010868RPA19760.449ENSMPUG00000013119RPA19756.594Mustela_putorius_furo
ENSMMOG00000010868RPA19656.419ENSMLUG00000006113RPA19556.419Myotis_lucifugus
ENSMMOG00000010868RPA19559.688ENSNGAG00000004522Rpa19456.559Nannospalax_galili
ENSMMOG00000010868RPA19974.037ENSNBRG00000009672RPA19874.037Neolamprologus_brichardi
ENSMMOG00000010868RPA19464.476ENSNBRG00000020595rpa19964.476Neolamprologus_brichardi
ENSMMOG00000010868RPA19756.594ENSNLEG00000017149RPA19756.594Nomascus_leucogenys
ENSMMOG00000010868RPA19748.922ENSMEUG00000006714RPA19948.922Notamacropus_eugenii
ENSMMOG00000010868RPA19560.132ENSODEG00000009038RPA19655.611Octodon_degus
ENSMMOG00000010868RPA19869.725ENSONIG00000013135rpa19862.521Oreochromis_niloticus
ENSMMOG00000010868RPA19760.927ENSOANG00000010880RPA19956.667Ornithorhynchus_anatinus
ENSMMOG00000010868RPA19760.398ENSOCUG00000001504RPA19854.041Oryctolagus_cuniculus
ENSMMOG00000010868RPA19862.167ENSORLG00000004856rpa19862.167Oryzias_latipes
ENSMMOG00000010868RPA19782.494ENSORLG00000003368RPA19869.302Oryzias_latipes
ENSMMOG00000010868RPA19682.254ENSORLG00020015284RPA19967.884Oryzias_latipes_hni
ENSMMOG00000010868RPA19862.333ENSORLG00020008980rpa19862.333Oryzias_latipes_hni
ENSMMOG00000010868RPA19782.494ENSORLG00015020383RPA19870.774Oryzias_latipes_hsok
ENSMMOG00000010868RPA19862.333ENSORLG00015013982rpa19862.333Oryzias_latipes_hsok
ENSMMOG00000010868RPA17082.338ENSORLG00015005867-9880.000Oryzias_latipes_hsok
ENSMMOG00000010868RPA19576.513ENSOMEG00000011040RPA19973.322Oryzias_melastigma
ENSMMOG00000010868RPA19861.889ENSOMEG00000004704rpa19861.889Oryzias_melastigma
ENSMMOG00000010868RPA17561.257ENSOGAG00000029379-9761.257Otolemur_garnettii
ENSMMOG00000010868RPA19759.912ENSOGAG00000005581-9856.406Otolemur_garnettii
ENSMMOG00000010868RPA19759.471ENSOARG00000014479RPA19755.927Ovis_aries
ENSMMOG00000010868RPA19756.427ENSPPAG00000039680RPA19756.427Pan_paniscus
ENSMMOG00000010868RPA19762.785ENSPPRG00000011807RPA19756.833Panthera_pardus
ENSMMOG00000010868RPA19762.785ENSPTIG00000007898RPA19756.833Panthera_tigris_altaica
ENSMMOG00000010868RPA19756.260ENSPTRG00000008539RPA19756.260Pan_troglodytes
ENSMMOG00000010868RPA19759.912ENSPANG00000024592RPA19756.093Papio_anubis
ENSMMOG00000010868RPA19270.443ENSPKIG00000008053rpa19362.630Paramormyrops_kingsleyae
ENSMMOG00000010868RPA19660.134ENSPSIG00000015617RPA19855.499Pelodiscus_sinensis
ENSMMOG00000010868RPA19669.283ENSPMGG00000000543RPA19971.095Periophthalmus_magnuspinnatus
ENSMMOG00000010868RPA19562.762ENSPMGG00000011589rpa19862.762Periophthalmus_magnuspinnatus
ENSMMOG00000010868RPA19759.333ENSPEMG00000021061Rpa19755.611Peromyscus_maniculatus_bairdii
ENSMMOG00000010868RPA19760.841ENSPCIG00000019049RPA19756.260Phascolarctos_cinereus
ENSMMOG00000010868RPA19861.500ENSPFOG00000003987rpa19861.500Poecilia_formosa
ENSMMOG00000010868RPA19861.873ENSPLAG00000004984rpa19861.873Poecilia_latipinna
ENSMMOG00000010868RPA19278.960ENSPLAG00000008844-8578.960Poecilia_latipinna
ENSMMOG00000010868RPA19279.208ENSPMEG00000003627-8579.208Poecilia_mexicana
ENSMMOG00000010868RPA19861.500ENSPMEG00000020602rpa19962.143Poecilia_mexicana
ENSMMOG00000010868RPA19878.458ENSPREG00000010119RPA19966.466Poecilia_reticulata
ENSMMOG00000010868RPA19355.944ENSPREG00000010174rpa19655.944Poecilia_reticulata
ENSMMOG00000010868RPA19759.735ENSPCOG00000001799RPA19756.784Propithecus_coquereli
ENSMMOG00000010868RPA19759.471ENSPVAG00000002149RPA19755.593Pteropus_vampyrus
ENSMMOG00000010868RPA19884.928ENSPNYG00000024165RPA19384.928Pundamilia_nyererei
ENSMMOG00000010868RPA19862.500ENSPNYG00000016316rpa19965.241Pundamilia_nyererei
ENSMMOG00000010868RPA19857.673ENSPNAG00000008599rpa19657.833Pygocentrus_nattereri
ENSMMOG00000010868RPA19761.098ENSRNOG00000003123Rpa19756.449Rattus_norvegicus
ENSMMOG00000010868RPA19760.132ENSRBIG00000036587RPA19756.260Rhinopithecus_bieti
ENSMMOG00000010868RPA19755.066ENSRROG00000043278RPA19752.421Rhinopithecus_roxellana
ENSMMOG00000010868RPA17634.707YAR007CRFA17334.707Saccharomyces_cerevisiae
ENSMMOG00000010868RPA19057.245ENSSBOG00000030233RPA19757.245Saimiri_boliviensis_boliviensis
ENSMMOG00000010868RPA19861.283ENSSHAG00000007969RPA19757.119Sarcophilus_harrisii
ENSMMOG00000010868RPA19865.372ENSSFOG00015005362rpa19165.372Scleropages_formosus
ENSMMOG00000010868RPA19584.652ENSSMAG00000019746RPA19870.968Scophthalmus_maximus
ENSMMOG00000010868RPA19884.382ENSSDUG00000016358RPA19970.597Seriola_dumerili
ENSMMOG00000010868RPA19862.709ENSSDUG00000011949rpa19862.709Seriola_dumerili
ENSMMOG00000010868RPA19862.542ENSSLDG00000011806rpa19862.542Seriola_lalandi_dorsalis
ENSMMOG00000010868RPA19685.612ENSSLDG00000020784RPA19969.778Seriola_lalandi_dorsalis
ENSMMOG00000010868RPA19751.923ENSSARG00000007506RPA19946.823Sorex_araneus
ENSMMOG00000010868RPA19654.992ENSSPUG00000007223RPA19854.992Sphenodon_punctatus
ENSMMOG00000010868RPA19862.542ENSSPAG00000009903rpa19862.542Stegastes_partitus
ENSMMOG00000010868RPA19979.798ENSSPAG00000011165RPA19979.798Stegastes_partitus
ENSMMOG00000010868RPA19758.319ENSSSCG00000017822RPA19956.928Sus_scrofa
ENSMMOG00000010868RPA19855.150ENSTGUG00000005775RPA19855.150Taeniopygia_guttata
ENSMMOG00000010868RPA19861.695ENSTRUG00000003616rpa19861.695Takifugu_rubripes
ENSMMOG00000010868RPA19883.645ENSTRUG00000000405RPA19883.226Takifugu_rubripes
ENSMMOG00000010868RPA19867.048ENSTNIG00000016199rpa19861.794Tetraodon_nigroviridis
ENSMMOG00000010868RPA17762.791ENSTBEG00000002709RPA17363.781Tupaia_belangeri
ENSMMOG00000010868RPA19659.465ENSTTRG00000001169RPA19655.912Tursiops_truncatus
ENSMMOG00000010868RPA18774.510ENSUAMG00000015676RPA19674.510Ursus_americanus
ENSMMOG00000010868RPA19760.132ENSUMAG00000009328RPA19757.313Ursus_maritimus
ENSMMOG00000010868RPA19854.139ENSVPAG00000009443RPA19854.139Vicugna_pacos
ENSMMOG00000010868RPA19759.645ENSVVUG00000021715RPA19756.093Vulpes_vulpes
ENSMMOG00000010868RPA19864.494ENSXETG00000013538rpa19859.664Xenopus_tropicalis
ENSMMOG00000010868RPA19360.035ENSXCOG00000010068rpa19560.035Xiphophorus_couchianus
ENSMMOG00000010868RPA19572.663ENSXCOG00000009899-9972.663Xiphophorus_couchianus
ENSMMOG00000010868RPA19878.587ENSXMAG00000010333RPA19278.587Xiphophorus_maculatus
ENSMMOG00000010868RPA19860.201ENSXMAG00000004102rpa19960.638Xiphophorus_maculatus

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