EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000011607 (Gene tree)
Gene ID: -
Gene Symbol: mbd1b
Alias: mbd1|wu:fi45g12
Full Name: methyl-CpG binding domain protein 1b
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 9874 bases
Position: chrKV751324.1:10717701-10727574
Accession: ZDB-GENE-030131-6318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000015209	MBD	PF01429.19	3.5e-13	1	1
ENSMMOP00000015207	MBD	PF01429.19	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000015458	-	1887	-	ENSMMOP00000015209	628 (aa)	-	-
ENSMMOT00000015456	-	1257	-	ENSMMOP00000015207	418 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000011607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000011607's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000011607	mbd1b	100	91.667	ENSAPOG00000012810	mbd1b	99	58.310	Acanthochromis_polyacanthus
ENSMMOG00000011607	mbd1b	95	84.112	ENSACIG00000010590	mbd1b	81	84.112	Amphilophus_citrinellus
ENSMMOG00000011607	mbd1b	95	91.837	ENSAOCG00000020272	mbd1b	82	91.837	Amphiprion_ocellaris
ENSMMOG00000011607	mbd1b	84	91.837	ENSAPEG00000023230	mbd1b	82	91.837	Amphiprion_percula
ENSMMOG00000011607	mbd1b	96	95.833	ENSATEG00000009608	mbd1b	81	95.833	Anabas_testudineus
ENSMMOG00000011607	mbd1b	83	93.750	ENSACLG00000021383	mbd1b	92	93.750	Astatotilapia_calliptera
ENSMMOG00000011607	mbd1b	87	81.250	ENSCSEG00000009082	mbd1b	99	54.775	Cynoglossus_semilaevis
ENSMMOG00000011607	mbd1b	80	83.333	ENSCVAG00000001167	mbd1b	92	83.333	Cyprinodon_variegatus
ENSMMOG00000011607	mbd1b	93	57.000	ENSDARG00000025699	mbd1b	77	57.000	Danio_rerio
ENSMMOG00000011607	mbd1b	99	70.968	ENSELUG00000004375	mbd1b	79	70.642	Esox_lucius
ENSMMOG00000011607	mbd1b	80	82.418	ENSFHEG00000020120	mbd1b	92	81.633	Fundulus_heteroclitus
ENSMMOG00000011607	mbd1b	86	87.179	ENSGAFG00000008975	mbd1b	99	53.881	Gambusia_affinis
ENSMMOG00000011607	mbd1b	79	87.179	ENSGACG00000012106	-	66	87.179	Gasterosteus_aculeatus
ENSMMOG00000011607	mbd1b	83	93.750	ENSHBUG00000014270	mbd1b	92	93.750	Haplochromis_burtoni
ENSMMOG00000011607	mbd1b	63	97.959	ENSHCOG00000009952	mbd1b	97	54.942	Hippocampus_comes
ENSMMOG00000011607	mbd1b	79	71.429	ENSIPUG00000015243	-	68	50.980	Ictalurus_punctatus
ENSMMOG00000011607	mbd1b	88	90.000	ENSKMAG00000020760	mbd1b	88	76.923	Kryptolebias_marmoratus
ENSMMOG00000011607	mbd1b	90	32.787	ENSLACG00000002414	-	79	40.741	Latimeria_chalumnae
ENSMMOG00000011607	mbd1b	71	79.832	ENSMAMG00000023341	-	78	79.832	Mastacembelus_armatus
ENSMMOG00000011607	mbd1b	83	93.750	ENSMZEG00005010421	mbd1b	92	93.750	Maylandia_zebra
ENSMMOG00000011607	mbd1b	63	49.231	ENSMODG00000001286	-	74	46.250	Monodelphis_domestica
ENSMMOG00000011607	mbd1b	88	93.750	ENSMALG00000007808	mbd1b	92	93.750	Monopterus_albus
ENSMMOG00000011607	mbd1b	84	95.833	ENSONIG00000020289	mbd1b	83	95.833	Oreochromis_niloticus
ENSMMOG00000011607	mbd1b	83	87.037	ENSORLG00000029390	mbd1b	81	87.037	Oryzias_latipes
ENSMMOG00000011607	mbd1b	83	87.037	ENSORLG00020000575	mbd1b	81	87.037	Oryzias_latipes_hni
ENSMMOG00000011607	mbd1b	83	87.037	ENSORLG00015014812	mbd1b	81	87.037	Oryzias_latipes_hsok
ENSMMOG00000011607	mbd1b	85	85.185	ENSOMEG00000023660	mbd1b	82	85.185	Oryzias_melastigma
ENSMMOG00000011607	mbd1b	66	47.778	ENSPCIG00000027937	-	66	46.875	Phascolarctos_cinereus
ENSMMOG00000011607	mbd1b	86	87.179	ENSPFOG00000007511	mbd1b	99	53.409	Poecilia_formosa
ENSMMOG00000011607	mbd1b	86	87.179	ENSPLAG00000021258	mbd1b	99	53.196	Poecilia_latipinna
ENSMMOG00000011607	mbd1b	88	87.179	ENSPMEG00000024145	mbd1b	99	59.314	Poecilia_mexicana
ENSMMOG00000011607	mbd1b	86	87.179	ENSPREG00000021805	mbd1b	99	53.425	Poecilia_reticulata
ENSMMOG00000011607	mbd1b	88	58.416	ENSPNAG00000018075	mbd1b	85	58.416	Pygocentrus_nattereri
ENSMMOG00000011607	mbd1b	87	74.286	ENSSFOG00015008591	-	80	50.133	Scleropages_formosus
ENSMMOG00000011607	mbd1b	89	87.179	ENSSMAG00000014640	mbd1b	65	95.833	Scophthalmus_maximus
ENSMMOG00000011607	mbd1b	84	91.667	ENSSDUG00000012996	mbd1b	84	83.439	Seriola_dumerili
ENSMMOG00000011607	mbd1b	100	56.338	ENSSLDG00000012422	mbd1b	100	57.183	Seriola_lalandi_dorsalis
ENSMMOG00000011607	mbd1b	89	95.833	ENSSPAG00000021447	mbd1b	92	73.871	Stegastes_partitus
ENSMMOG00000011607	mbd1b	87	92.500	ENSTRUG00000013422	mbd1b	80	79.339	Takifugu_rubripes
ENSMMOG00000011607	mbd1b	67	91.837	ENSTNIG00000007326	-	58	80.180	Tetraodon_nigroviridis
ENSMMOG00000011607	mbd1b	90	83.673	ENSXMAG00000005628	mbd1b	99	53.196	Xiphophorus_maculatus