EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000011887 (Gene tree)
Gene ID: -
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 14956 bases
Position: chrKV751316.1:4083307-4098262
Accession: ZDB-GENE-030131-577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000015591	RRM_4	PF10598.9	2.7e-48	1	1
ENSMMOP00000015591	U5_2-snRNA_bdg	PF10597.9	6.3e-74	1	1
ENSMMOP00000015591	PRO8NT	PF08082.11	7.2e-85	1	1
ENSMMOP00000015591	U6-snRNA_bdg	PF10596.9	1.6e-89	1	1
ENSMMOP00000015591	PROCN	PF08083.11	2e-235	1	1
ENSMMOP00000015591	PRP8_domainIV	PF12134.8	3.7e-130	1	1
ENSMMOP00000015591	PROCT	PF08084.11	2.4e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000015847	-	6978	-	ENSMMOP00000015591	2325 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000011887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000011887's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000011887	prpf8	100	97.305	ENSG00000174231	PRPF8	100	97.305	Homo_sapiens
ENSMMOG00000011887	prpf8	100	99.145	ENSAPOG00000010079	prpf8	100	99.145	Acanthochromis_polyacanthus
ENSMMOG00000011887	prpf8	100	97.305	ENSAMEG00000007940	PRPF8	100	97.305	Ailuropoda_melanoleuca
ENSMMOG00000011887	prpf8	100	96.985	ENSACIG00000018280	prpf8	100	96.985	Amphilophus_citrinellus
ENSMMOG00000011887	prpf8	100	99.102	ENSAOCG00000010725	prpf8	100	99.102	Amphiprion_ocellaris
ENSMMOG00000011887	prpf8	100	99.102	ENSAPEG00000014397	prpf8	100	99.102	Amphiprion_percula
ENSMMOG00000011887	prpf8	100	98.460	ENSATEG00000010062	prpf8	100	98.460	Anabas_testudineus
ENSMMOG00000011887	prpf8	96	97.642	ENSAPLG00000010357	PRPF8	100	97.642	Anas_platyrhynchos
ENSMMOG00000011887	prpf8	82	95.619	ENSACAG00000014784	PRPF8	99	95.619	Anolis_carolinensis
ENSMMOG00000011887	prpf8	100	97.305	ENSANAG00000032629	PRPF8	100	97.305	Aotus_nancymaae
ENSMMOG00000011887	prpf8	100	98.298	ENSACLG00000020858	prpf8	100	98.298	Astatotilapia_calliptera
ENSMMOG00000011887	prpf8	100	98.546	ENSAMXG00000020291	prpf8	100	98.546	Astyanax_mexicanus
ENSMMOG00000011887	prpf8	100	97.305	ENSBTAG00000011488	PRPF8	100	97.305	Bos_taurus
ENSMMOG00000011887	prpf8	99	86.268	WBGene00004187	prp-8	99	86.716	Caenorhabditis_elegans
ENSMMOG00000011887	prpf8	100	97.305	ENSCJAG00000001911	PRPF8	100	97.305	Callithrix_jacchus
ENSMMOG00000011887	prpf8	100	97.305	ENSCAFG00000019221	PRPF8	100	97.305	Canis_familiaris
ENSMMOG00000011887	prpf8	96	97.724	ENSCAFG00020009943	PRPF8	100	97.724	Canis_lupus_dingo
ENSMMOG00000011887	prpf8	100	97.305	ENSCHIG00000017499	PRPF8	100	97.305	Capra_hircus
ENSMMOG00000011887	prpf8	100	97.305	ENSTSYG00000014120	PRPF8	100	97.305	Carlito_syrichta
ENSMMOG00000011887	prpf8	96	95.501	ENSCAPG00000009459	PRPF8	99	95.501	Cavia_aperea
ENSMMOG00000011887	prpf8	100	97.305	ENSCPOG00000010379	PRPF8	100	97.305	Cavia_porcellus
ENSMMOG00000011887	prpf8	100	97.305	ENSCCAG00000031983	-	100	97.305	Cebus_capucinus
ENSMMOG00000011887	prpf8	100	97.305	ENSCATG00000038595	PRPF8	100	97.305	Cercocebus_atys
ENSMMOG00000011887	prpf8	100	97.305	ENSCLAG00000004388	PRPF8	100	97.305	Chinchilla_lanigera
ENSMMOG00000011887	prpf8	100	97.305	ENSCSAG00000013929	PRPF8	100	97.305	Chlorocebus_sabaeus
ENSMMOG00000011887	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	88	97.333	Choloepus_hoffmanni
ENSMMOG00000011887	prpf8	100	97.263	ENSCPBG00000020409	PRPF8	100	97.263	Chrysemys_picta_bellii
ENSMMOG00000011887	prpf8	98	92.993	ENSCSAVG00000007825	-	100	90.936	Ciona_savignyi
ENSMMOG00000011887	prpf8	100	97.305	ENSCANG00000043088	PRPF8	100	97.305	Colobus_angolensis_palliatus
ENSMMOG00000011887	prpf8	74	99.213	ENSCGRG00000005129	Prpf8	100	99.213	Cricetulus_griseus_crigri
ENSMMOG00000011887	prpf8	100	98.803	ENSCSEG00000007905	prpf8	100	98.803	Cynoglossus_semilaevis
ENSMMOG00000011887	prpf8	100	98.377	ENSDARG00000026180	prpf8	100	98.377	Danio_rerio
ENSMMOG00000011887	prpf8	93	97.379	ENSDNOG00000018471	PRPF8	99	97.379	Dasypus_novemcinctus
ENSMMOG00000011887	prpf8	83	95.751	ENSDORG00000006185	Prpf8	96	95.751	Dipodomys_ordii
ENSMMOG00000011887	prpf8	99	91.092	FBgn0033688	Prp8	97	91.573	Drosophila_melanogaster
ENSMMOG00000011887	prpf8	100	91.959	ENSETEG00000017592	PRPF8	100	91.959	Echinops_telfairi
ENSMMOG00000011887	prpf8	99	93.090	ENSEBUG00000006548	prpf8	99	93.090	Eptatretus_burgeri
ENSMMOG00000011887	prpf8	100	97.305	ENSEASG00005009514	PRPF8	100	97.305	Equus_asinus_asinus
ENSMMOG00000011887	prpf8	97	97.758	ENSECAG00000021318	PRPF8	100	97.758	Equus_caballus
ENSMMOG00000011887	prpf8	67	98.519	ENSEEUG00000012120	-	67	98.519	Erinaceus_europaeus
ENSMMOG00000011887	prpf8	98	97.509	ENSELUG00000007120	prpf8	99	97.509	Esox_lucius
ENSMMOG00000011887	prpf8	100	97.305	ENSFCAG00000006297	PRPF8	100	97.305	Felis_catus
ENSMMOG00000011887	prpf8	100	97.348	ENSFALG00000006628	PRPF8	100	97.348	Ficedula_albicollis
ENSMMOG00000011887	prpf8	100	97.305	ENSFDAG00000004711	PRPF8	100	97.305	Fukomys_damarensis
ENSMMOG00000011887	prpf8	100	98.335	ENSFHEG00000021084	prpf8	100	98.335	Fundulus_heteroclitus
ENSMMOG00000011887	prpf8	100	96.404	ENSGMOG00000002028	prpf8	99	96.404	Gadus_morhua
ENSMMOG00000011887	prpf8	100	97.348	ENSGALG00000002943	PRPF8	100	97.348	Gallus_gallus
ENSMMOG00000011887	prpf8	99	98.584	ENSGAFG00000010337	prpf8	99	98.584	Gambusia_affinis
ENSMMOG00000011887	prpf8	100	98.760	ENSGACG00000008504	prpf8	100	98.760	Gasterosteus_aculeatus
ENSMMOG00000011887	prpf8	100	97.305	ENSGAGG00000008350	PRPF8	100	97.305	Gopherus_agassizii
ENSMMOG00000011887	prpf8	100	97.305	ENSGGOG00000005516	PRPF8	100	97.305	Gorilla_gorilla
ENSMMOG00000011887	prpf8	100	98.460	ENSHBUG00000016192	prpf8	100	98.460	Haplochromis_burtoni
ENSMMOG00000011887	prpf8	100	97.305	ENSHGLG00000012029	PRPF8	100	97.305	Heterocephalus_glaber_female
ENSMMOG00000011887	prpf8	100	97.305	ENSHGLG00100016494	PRPF8	100	97.305	Heterocephalus_glaber_male
ENSMMOG00000011887	prpf8	100	98.632	ENSHCOG00000016414	prpf8	100	98.632	Hippocampus_comes
ENSMMOG00000011887	prpf8	100	98.460	ENSIPUG00000023230	prpf8	100	98.460	Ictalurus_punctatus
ENSMMOG00000011887	prpf8	100	97.305	ENSSTOG00000005128	PRPF8	100	97.305	Ictidomys_tridecemlineatus
ENSMMOG00000011887	prpf8	100	95.167	ENSJJAG00000021159	Prpf8	100	95.081	Jaculus_jaculus
ENSMMOG00000011887	prpf8	99	98.583	ENSKMAG00000016118	prpf8	99	98.583	Kryptolebias_marmoratus
ENSMMOG00000011887	prpf8	100	99.102	ENSLBEG00000026903	prpf8	100	99.102	Labrus_bergylta
ENSMMOG00000011887	prpf8	95	95.133	ENSLACG00000010479	PRPF8	99	97.826	Latimeria_chalumnae
ENSMMOG00000011887	prpf8	99	98.076	ENSLOCG00000005409	prpf8	99	98.076	Lepisosteus_oculatus
ENSMMOG00000011887	prpf8	100	97.305	ENSLAFG00000015445	PRPF8	100	97.305	Loxodonta_africana
ENSMMOG00000011887	prpf8	100	97.305	ENSMFAG00000039995	PRPF8	100	97.305	Macaca_fascicularis
ENSMMOG00000011887	prpf8	100	97.305	ENSMMUG00000004820	PRPF8	100	97.305	Macaca_mulatta
ENSMMOG00000011887	prpf8	100	97.305	ENSMNEG00000035713	PRPF8	100	97.305	Macaca_nemestrina
ENSMMOG00000011887	prpf8	100	97.305	ENSMLEG00000037937	PRPF8	100	97.305	Mandrillus_leucophaeus
ENSMMOG00000011887	prpf8	100	99.102	ENSMAMG00000008919	prpf8	100	99.102	Mastacembelus_armatus
ENSMMOG00000011887	prpf8	100	98.298	ENSMZEG00005015073	prpf8	100	98.298	Maylandia_zebra
ENSMMOG00000011887	prpf8	100	97.348	ENSMGAG00000004769	PRPF8	100	97.348	Meleagris_gallopavo
ENSMMOG00000011887	prpf8	100	97.305	ENSMICG00000010320	PRPF8	100	97.305	Microcebus_murinus
ENSMMOG00000011887	prpf8	100	97.305	ENSMOCG00000016838	Prpf8	100	97.305	Microtus_ochrogaster
ENSMMOG00000011887	prpf8	100	97.095	ENSMODG00000010480	PRPF8	100	97.095	Monodelphis_domestica
ENSMMOG00000011887	prpf8	97	98.536	ENSMALG00000003558	prpf8	100	98.536	Monopterus_albus
ENSMMOG00000011887	prpf8	100	97.263	MGP_CAROLIEiJ_G0016740	Prpf8	100	97.263	Mus_caroli
ENSMMOG00000011887	prpf8	100	97.263	ENSMUSG00000020850	Prpf8	100	97.263	Mus_musculus
ENSMMOG00000011887	prpf8	100	97.220	MGP_PahariEiJ_G0017877	Prpf8	100	97.220	Mus_pahari
ENSMMOG00000011887	prpf8	100	97.263	MGP_SPRETEiJ_G0017583	Prpf8	100	97.263	Mus_spretus
ENSMMOG00000011887	prpf8	100	97.305	ENSMPUG00000013227	PRPF8	100	97.305	Mustela_putorius_furo
ENSMMOG00000011887	prpf8	100	97.181	ENSMLUG00000002666	PRPF8	100	97.181	Myotis_lucifugus
ENSMMOG00000011887	prpf8	100	95.552	ENSNGAG00000005305	Prpf8	100	95.552	Nannospalax_galili
ENSMMOG00000011887	prpf8	100	98.340	ENSNBRG00000013127	prpf8	100	98.340	Neolamprologus_brichardi
ENSMMOG00000011887	prpf8	97	96.760	ENSNLEG00000000897	PRPF8	98	96.760	Nomascus_leucogenys
ENSMMOG00000011887	prpf8	98	95.828	ENSMEUG00000015999	PRPF8	100	95.828	Notamacropus_eugenii
ENSMMOG00000011887	prpf8	100	95.552	ENSOPRG00000003102	PRPF8	100	95.552	Ochotona_princeps
ENSMMOG00000011887	prpf8	100	97.305	ENSODEG00000008468	PRPF8	100	97.305	Octodon_degus
ENSMMOG00000011887	prpf8	100	98.298	ENSONIG00000008153	prpf8	100	98.298	Oreochromis_niloticus
ENSMMOG00000011887	prpf8	82	99.065	ENSOANG00000004250	PRPF8	97	99.065	Ornithorhynchus_anatinus
ENSMMOG00000011887	prpf8	100	97.305	ENSOCUG00000000081	PRPF8	100	97.305	Oryctolagus_cuniculus
ENSMMOG00000011887	prpf8	100	98.046	ENSORLG00000008036	prpf8	100	98.046	Oryzias_latipes
ENSMMOG00000011887	prpf8	100	98.004	ENSORLG00020021070	prpf8	100	98.004	Oryzias_latipes_hni
ENSMMOG00000011887	prpf8	100	98.046	ENSORLG00015002340	prpf8	100	98.046	Oryzias_latipes_hsok
ENSMMOG00000011887	prpf8	100	96.432	ENSOMEG00000016866	prpf8	100	96.432	Oryzias_melastigma
ENSMMOG00000011887	prpf8	100	97.181	ENSOARG00000013312	PRPF8	100	97.181	Ovis_aries
ENSMMOG00000011887	prpf8	100	97.305	ENSPPAG00000042753	PRPF8	100	97.305	Pan_paniscus
ENSMMOG00000011887	prpf8	100	97.305	ENSPPRG00000008746	PRPF8	100	97.305	Panthera_pardus
ENSMMOG00000011887	prpf8	100	97.220	ENSPTIG00000019200	PRPF8	100	97.220	Panthera_tigris_altaica
ENSMMOG00000011887	prpf8	100	97.305	ENSPTRG00000039576	PRPF8	100	97.305	Pan_troglodytes
ENSMMOG00000011887	prpf8	98	97.741	ENSPANG00000024607	PRPF8	98	97.741	Papio_anubis
ENSMMOG00000011887	prpf8	100	98.082	ENSPKIG00000011201	prpf8	100	98.082	Paramormyrops_kingsleyae
ENSMMOG00000011887	prpf8	100	97.220	ENSPSIG00000013393	PRPF8	100	97.220	Pelodiscus_sinensis
ENSMMOG00000011887	prpf8	100	97.305	ENSPEMG00000021699	Prpf8	100	97.305	Peromyscus_maniculatus_bairdii
ENSMMOG00000011887	prpf8	96	93.497	ENSPMAG00000005438	prpf8	100	93.541	Petromyzon_marinus
ENSMMOG00000011887	prpf8	100	97.095	ENSPCIG00000022603	PRPF8	100	97.635	Phascolarctos_cinereus
ENSMMOG00000011887	prpf8	100	97.837	ENSPFOG00000007005	prpf8	100	97.795	Poecilia_formosa
ENSMMOG00000011887	prpf8	100	97.006	ENSPLAG00000020777	prpf8	100	97.006	Poecilia_latipinna
ENSMMOG00000011887	prpf8	100	97.837	ENSPMEG00000004051	prpf8	100	97.795	Poecilia_mexicana
ENSMMOG00000011887	prpf8	100	98.460	ENSPREG00000021902	prpf8	100	98.460	Poecilia_reticulata
ENSMMOG00000011887	prpf8	100	97.305	ENSPPYG00000007777	PRPF8	100	97.305	Pongo_abelii
ENSMMOG00000011887	prpf8	90	97.030	ENSPCAG00000008938	PRPF8	90	97.030	Procavia_capensis
ENSMMOG00000011887	prpf8	100	97.305	ENSPCOG00000015182	PRPF8	100	97.305	Propithecus_coquereli
ENSMMOG00000011887	prpf8	93	98.503	ENSPVAG00000002134	PRPF8	93	98.503	Pteropus_vampyrus
ENSMMOG00000011887	prpf8	100	98.460	ENSPNYG00000016356	prpf8	100	98.460	Pundamilia_nyererei
ENSMMOG00000011887	prpf8	100	98.631	ENSPNAG00000009247	prpf8	100	98.631	Pygocentrus_nattereri
ENSMMOG00000011887	prpf8	100	97.263	ENSRNOG00000003495	Prpf8	100	97.263	Rattus_norvegicus
ENSMMOG00000011887	prpf8	100	97.305	ENSRBIG00000031219	PRPF8	100	97.305	Rhinopithecus_bieti
ENSMMOG00000011887	prpf8	100	97.305	ENSRROG00000038014	PRPF8	100	97.305	Rhinopithecus_roxellana
ENSMMOG00000011887	prpf8	98	62.128	YHR165C	PRP8	95	62.215	Saccharomyces_cerevisiae
ENSMMOG00000011887	prpf8	100	97.305	ENSSBOG00000029717	PRPF8	100	97.305	Saimiri_boliviensis_boliviensis
ENSMMOG00000011887	prpf8	100	97.053	ENSSHAG00000006167	PRPF8	100	97.053	Sarcophilus_harrisii
ENSMMOG00000011887	prpf8	100	98.249	ENSSFOG00015013905	prpf8	100	98.249	Scleropages_formosus
ENSMMOG00000011887	prpf8	100	98.802	ENSSMAG00000017736	prpf8	100	98.802	Scophthalmus_maximus
ENSMMOG00000011887	prpf8	100	99.145	ENSSDUG00000003029	prpf8	100	99.145	Seriola_dumerili
ENSMMOG00000011887	prpf8	69	99.937	ENSSLDG00000017096	prpf8	100	99.937	Seriola_lalandi_dorsalis
ENSMMOG00000011887	prpf8	87	94.553	ENSSARG00000002892	PRPF8	87	94.553	Sorex_araneus
ENSMMOG00000011887	prpf8	100	97.053	ENSSPUG00000007463	PRPF8	100	97.053	Sphenodon_punctatus
ENSMMOG00000011887	prpf8	100	98.546	ENSSPAG00000015639	prpf8	100	98.546	Stegastes_partitus
ENSMMOG00000011887	prpf8	100	97.305	ENSSSCG00000017817	PRPF8	100	97.305	Sus_scrofa
ENSMMOG00000011887	prpf8	100	97.348	ENSTGUG00000005648	-	100	97.348	Taeniopygia_guttata
ENSMMOG00000011887	prpf8	51	98.778	ENSTGUG00000015597	-	95	98.778	Taeniopygia_guttata
ENSMMOG00000011887	prpf8	100	98.717	ENSTRUG00000015906	prpf8	100	98.717	Takifugu_rubripes
ENSMMOG00000011887	prpf8	94	99.522	ENSTNIG00000003460	prpf8	99	99.522	Tetraodon_nigroviridis
ENSMMOG00000011887	prpf8	93	98.843	ENSTBEG00000006431	PRPF8	93	98.843	Tupaia_belangeri
ENSMMOG00000011887	prpf8	100	96.749	ENSTTRG00000006869	PRPF8	100	96.749	Tursiops_truncatus
ENSMMOG00000011887	prpf8	54	95.800	ENSUAMG00000015644	-	96	95.800	Ursus_americanus
ENSMMOG00000011887	prpf8	100	97.049	ENSUMAG00000009385	PRPF8	100	97.049	Ursus_maritimus
ENSMMOG00000011887	prpf8	72	97.931	ENSVPAG00000006063	-	71	97.931	Vicugna_pacos
ENSMMOG00000011887	prpf8	100	97.305	ENSVVUG00000021695	PRPF8	99	97.305	Vulpes_vulpes
ENSMMOG00000011887	prpf8	100	97.136	ENSXETG00000022259	prpf8	100	97.136	Xenopus_tropicalis
ENSMMOG00000011887	prpf8	100	98.377	ENSXCOG00000012775	prpf8	100	98.377	Xiphophorus_couchianus
ENSMMOG00000011887	prpf8	100	98.334	ENSXMAG00000008505	prpf8	100	98.334	Xiphophorus_maculatus