EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMMOG00000011923 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3 (1 of many)
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Mola_mola
Status
putative
Strand
Plus strand
Length
7489 bases
Position
chrKV751346.1:4571268-4578756
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMMOP00000015629CPSF73-100_CPF11718.82e-1711
ENSMMOP00000015685CPSF73-100_CPF11718.82.2e-1711
ENSMMOP00000015633CPSF73-100_CPF11718.82.3e-1711
ENSMMOP00000015619CPSF73-100_CPF11718.82.8e-1711
ENSMMOP00000015631CPSF73-100_CPF11718.84.3e-1511
ENSMMOP00000015685Beta-CaspPF10996.82.2e-1311
ENSMMOP00000015633Beta-CaspPF10996.82.3e-1311
ENSMMOP00000015619Beta-CaspPF10996.82.5e-1311
ENSMMOP00000015631Beta-CaspPF10996.82.6e-1311
ENSMMOP00000015629Beta-CaspPF10996.82.7e-1311
ENSMMOP00000015684Beta-CaspPF10996.87.9e-0711
ENSMMOP00000015685Lactamase_BPF00753.272.1e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMMOT00000015876CPSF3 (1 of many)-2011665-ENSMMOP00000015619554 (aa)--
ENSMMOT00000015893CPSF3 (1 of many)-2031665-ENSMMOP00000015631554 (aa)--
ENSMMOT00000015891CPSF3 (1 of many)-2021698-ENSMMOP00000015629565 (aa)--
ENSMMOT00000015895CPSF3 (1 of many)-2041599-ENSMMOP00000015633532 (aa)--
ENSMMOT00000015948CPSF3 (1 of many)-2061569-ENSMMOP00000015685522 (aa)--
ENSMMOT00000015947CPSF3 (1 of many)-205696-ENSMMOP00000015684231 (aa)--
Gene Model
Click here to download ENSMMOG00000011923's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000011923's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMMOG00000011923CPSF38477.857ENSMMOG00000018212CPSF37577.857
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMMOG00000011923CPSF38477.857ENSG00000119203CPSF37585.294Homo_sapiens
ENSMMOG00000011923CPSF38477.143ENSAPOG00000022087cpsf37678.014Acanthochromis_polyacanthus
ENSMMOG00000011923CPSF35591.667ENSAPOG00000012241CPSF36591.667Acanthochromis_polyacanthus
ENSMMOG00000011923CPSF38477.857ENSAMEG00000008493CPSF38071.779Ailuropoda_melanoleuca
ENSMMOG00000011923CPSF38579.078ENSACIG00000009846cpsf37879.078Amphilophus_citrinellus
ENSMMOG00000011923CPSF38580.851ENSACIG00000023663CPSF37980.851Amphilophus_citrinellus
ENSMMOG00000011923CPSF38581.560ENSAOCG00000010077CPSF37881.560Amphiprion_ocellaris
ENSMMOG00000011923CPSF38477.143ENSAOCG00000022056cpsf38070.536Amphiprion_ocellaris
ENSMMOG00000011923CPSF38581.560ENSAPEG00000021167CPSF37881.560Amphiprion_percula
ENSMMOG00000011923CPSF38578.369ENSAPEG00000019526cpsf37878.369Amphiprion_percula
ENSMMOG00000011923CPSF38578.369ENSATEG00000003959cpsf37878.369Anabas_testudineus
ENSMMOG00000011923CPSF38579.286ENSATEG00000014525CPSF37972.619Anabas_testudineus
ENSMMOG00000011923CPSF38477.857ENSAPLG00000006941CPSF37377.857Anas_platyrhynchos
ENSMMOG00000011923CPSF38477.500ENSACAG00000001759CPSF37877.500Anolis_carolinensis
ENSMMOG00000011923CPSF38477.857ENSANAG00000031254CPSF37577.857Aotus_nancymaae
ENSMMOG00000011923CPSF38578.014ENSACLG00000014484cpsf37878.014Astatotilapia_calliptera
ENSMMOG00000011923CPSF38581.206ENSACLG00000018846CPSF37981.206Astatotilapia_calliptera
ENSMMOG00000011923CPSF38580.142ENSAMXG00000004786cpsf37880.142Astyanax_mexicanus
ENSMMOG00000011923CPSF38477.857ENSBTAG00000019735CPSF38071.779Bos_taurus
ENSMMOG00000011923CPSF38477.857ENSCJAG00000006276CPSF38071.779Callithrix_jacchus
ENSMMOG00000011923CPSF38477.857ENSCAFG00000003375CPSF37671.779Canis_familiaris
ENSMMOG00000011923CPSF36977.857ENSCAFG00020026799CPSF37571.472Canis_lupus_dingo
ENSMMOG00000011923CPSF38477.857ENSCHIG00000013973CPSF38071.779Capra_hircus
ENSMMOG00000011923CPSF38477.857ENSTSYG00000002967CPSF38071.779Carlito_syrichta
ENSMMOG00000011923CPSF38477.857ENSCAPG00000013851CPSF37577.857Cavia_aperea
ENSMMOG00000011923CPSF38477.857ENSCPOG00000011299CPSF38071.779Cavia_porcellus
ENSMMOG00000011923CPSF38477.857ENSCCAG00000036730CPSF37477.857Cebus_capucinus
ENSMMOG00000011923CPSF38477.857ENSCATG00000014770CPSF37971.779Cercocebus_atys
ENSMMOG00000011923CPSF38477.857ENSCLAG00000002727CPSF38071.779Chinchilla_lanigera
ENSMMOG00000011923CPSF39955.312ENSCSAG00000007125CPSF39953.678Chlorocebus_sabaeus
ENSMMOG00000011923CPSF37477.209ENSCHOG00000000180CPSF36577.674Choloepus_hoffmanni
ENSMMOG00000011923CPSF38477.857ENSCPBG00000014074CPSF38070.833Chrysemys_picta_bellii
ENSMMOG00000011923CPSF38463.571ENSCING00000007214-7858.769Ciona_intestinalis
ENSMMOG00000011923CPSF38472.519ENSCANG00000034435CPSF37866.558Colobus_angolensis_palliatus
ENSMMOG00000011923CPSF38477.857ENSCGRG00001013134Cpsf38071.779Cricetulus_griseus_chok1gshd
ENSMMOG00000011923CPSF38477.857ENSCGRG00000018319Cpsf38071.779Cricetulus_griseus_crigri
ENSMMOG00000011923CPSF38580.142ENSCSEG00000002021CPSF37880.142Cynoglossus_semilaevis
ENSMMOG00000011923CPSF38578.214ENSCVAG00000015067CPSF38072.321Cyprinodon_variegatus
ENSMMOG00000011923CPSF38578.571ENSDARG00000027649cpsf38072.024Danio_rerio
ENSMMOG00000011923CPSF38477.500ENSDNOG00000008940CPSF37671.472Dasypus_novemcinctus
ENSMMOG00000011923CPSF37877.857ENSDORG00000014263Cpsf37971.472Dipodomys_ordii
ENSMMOG00000011923CPSF39941.890FBgn0261065Cpsf739840.675Drosophila_melanogaster
ENSMMOG00000011923CPSF37867.500ENSETEG00000003893CPSF37267.500Echinops_telfairi
ENSMMOG00000011923CPSF38473.571ENSEBUG00000009018cpsf38166.667Eptatretus_burgeri
ENSMMOG00000011923CPSF38477.857ENSEASG00005003970CPSF38071.779Equus_asinus_asinus
ENSMMOG00000011923CPSF38477.857ENSECAG00000019911CPSF38071.779Equus_caballus
ENSMMOG00000011923CPSF38462.411ENSEEUG00000015422CPSF38058.232Erinaceus_europaeus
ENSMMOG00000011923CPSF38578.723ENSELUG00000013775cpsf37878.723Esox_lucius
ENSMMOG00000011923CPSF38477.857ENSFCAG00000007852CPSF37777.857Felis_catus
ENSMMOG00000011923CPSF38477.857ENSFALG00000006572CPSF37777.857Ficedula_albicollis
ENSMMOG00000011923CPSF38478.214ENSFDAG00000006317CPSF37971.779Fukomys_damarensis
ENSMMOG00000011923CPSF38477.143ENSFHEG00000014774cpsf38070.536Fundulus_heteroclitus
ENSMMOG00000011923CPSF36346.719ENSFHEG00000012186CPSF310047.906Fundulus_heteroclitus
ENSMMOG00000011923CPSF38577.500ENSGMOG00000003157cpsf38070.833Gadus_morhua
ENSMMOG00000011923CPSF38477.857ENSGALG00000016424CPSF37877.857Gallus_gallus
ENSMMOG00000011923CPSF38577.660ENSGAFG00000019449cpsf37877.660Gambusia_affinis
ENSMMOG00000011923CPSF38578.571ENSGAFG00000008016CPSF38071.726Gambusia_affinis
ENSMMOG00000011923CPSF35679.825ENSGAGG00000025583CPSF36679.825Gopherus_agassizii
ENSMMOG00000011923CPSF38477.857ENSGGOG00000001757CPSF37877.857Gorilla_gorilla
ENSMMOG00000011923CPSF38578.014ENSHBUG00000001188cpsf37878.014Haplochromis_burtoni
ENSMMOG00000011923CPSF38478.214ENSHGLG00000000666CPSF37972.086Heterocephalus_glaber_female
ENSMMOG00000011923CPSF38478.214ENSHGLG00100007765CPSF37972.086Heterocephalus_glaber_male
ENSMMOG00000011923CPSF38478.929ENSHCOG00000015957CPSF37972.619Hippocampus_comes
ENSMMOG00000011923CPSF38476.786ENSHCOG00000007251cpsf38070.238Hippocampus_comes
ENSMMOG00000011923CPSF38579.433ENSIPUG00000023488cpsf37879.078Ictalurus_punctatus
ENSMMOG00000011923CPSF38477.857ENSSTOG00000004476CPSF38071.779Ictidomys_tridecemlineatus
ENSMMOG00000011923CPSF38477.500ENSJJAG00000023415Cpsf38071.472Jaculus_jaculus
ENSMMOG00000011923CPSF38476.786ENSKMAG00000002806cpsf38070.238Kryptolebias_marmoratus
ENSMMOG00000011923CPSF38578.571ENSKMAG00000007317CPSF38072.917Kryptolebias_marmoratus
ENSMMOG00000011923CPSF37878.929ENSLBEG00000013492CPSF37972.917Labrus_bergylta
ENSMMOG00000011923CPSF39955.519ENSLBEG00000020569cpsf39653.823Labrus_bergylta
ENSMMOG00000011923CPSF38577.857ENSLACG00000008308CPSF310054.033Latimeria_chalumnae
ENSMMOG00000011923CPSF38578.571ENSLOCG00000016823cpsf38071.726Lepisosteus_oculatus
ENSMMOG00000011923CPSF38477.500ENSLAFG00000009467CPSF37377.500Loxodonta_africana
ENSMMOG00000011923CPSF38477.857ENSMFAG00000001339CPSF37777.857Macaca_fascicularis
ENSMMOG00000011923CPSF38477.857ENSMMUG00000018038CPSF37777.857Macaca_mulatta
ENSMMOG00000011923CPSF38461.069ENSMNEG00000039447CPSF37857.143Macaca_nemestrina
ENSMMOG00000011923CPSF38477.857ENSMLEG00000026825CPSF38071.779Mandrillus_leucophaeus
ENSMMOG00000011923CPSF38581.206ENSMAMG00000008835CPSF37881.206Mastacembelus_armatus
ENSMMOG00000011923CPSF38578.723ENSMAMG00000003076cpsf37778.723Mastacembelus_armatus
ENSMMOG00000011923CPSF38578.014ENSMZEG00005014358cpsf37878.014Maylandia_zebra
ENSMMOG00000011923CPSF38581.206ENSMZEG00005006258CPSF37981.206Maylandia_zebra
ENSMMOG00000011923CPSF38477.857ENSMGAG00000013995CPSF37577.857Meleagris_gallopavo
ENSMMOG00000011923CPSF38472.500ENSMICG00000002363CPSF37772.500Microcebus_murinus
ENSMMOG00000011923CPSF38477.857ENSMOCG00000020067Cpsf37871.779Microtus_ochrogaster
ENSMMOG00000011923CPSF38477.857ENSMODG00000014703CPSF38071.779Monodelphis_domestica
ENSMMOG00000011923CPSF38578.014ENSMALG00000016416cpsf37878.014Monopterus_albus
ENSMMOG00000011923CPSF38576.491ENSMALG00000011474CPSF37876.491Monopterus_albus
ENSMMOG00000011923CPSF38477.857MGP_CAROLIEiJ_G0017640Cpsf38071.779Mus_caroli
ENSMMOG00000011923CPSF38477.857ENSMUSG00000054309Cpsf39374.222Mus_musculus
ENSMMOG00000011923CPSF38477.857MGP_PahariEiJ_G0029397Cpsf38071.779Mus_pahari
ENSMMOG00000011923CPSF38477.857MGP_SPRETEiJ_G0018481Cpsf38071.779Mus_spretus
ENSMMOG00000011923CPSF38477.857ENSMPUG00000013213CPSF37377.857Mustela_putorius_furo
ENSMMOG00000011923CPSF38477.857ENSMLUG00000010636CPSF38071.779Myotis_lucifugus
ENSMMOG00000011923CPSF38477.857ENSNGAG00000019836Cpsf38071.779Nannospalax_galili
ENSMMOG00000011923CPSF38581.206ENSNBRG00000010525CPSF37981.206Neolamprologus_brichardi
ENSMMOG00000011923CPSF38577.660ENSNBRG00000004770cpsf37877.660Neolamprologus_brichardi
ENSMMOG00000011923CPSF38477.857ENSNLEG00000013359CPSF37777.857Nomascus_leucogenys
ENSMMOG00000011923CPSF37581.250ENSMEUG00000013117-5694.643Notamacropus_eugenii
ENSMMOG00000011923CPSF38457.857ENSOPRG00000008902CPSF37954.601Ochotona_princeps
ENSMMOG00000011923CPSF38478.214ENSODEG00000003129CPSF38072.086Octodon_degus
ENSMMOG00000011923CPSF38477.143ENSONIG00000018812cpsf38070.833Oreochromis_niloticus
ENSMMOG00000011923CPSF37276.555ENSOANG00000008577CPSF37677.033Ornithorhynchus_anatinus
ENSMMOG00000011923CPSF38477.857ENSOCUG00000003728CPSF38071.779Oryctolagus_cuniculus
ENSMMOG00000011923CPSF38476.071ENSORLG00000018854cpsf38070.238Oryzias_latipes
ENSMMOG00000011923CPSF38578.014ENSORLG00020013331cpsf37878.014Oryzias_latipes_hni
ENSMMOG00000011923CPSF38578.014ENSORLG00015011017cpsf37878.014Oryzias_latipes_hsok
ENSMMOG00000011923CPSF38476.071ENSOMEG00000010647cpsf37670.238Oryzias_melastigma
ENSMMOG00000011923CPSF38469.286ENSOGAG00000001680CPSF37964.110Otolemur_garnettii
ENSMMOG00000011923CPSF38477.857ENSOARG00000015073CPSF38071.779Ovis_aries
ENSMMOG00000011923CPSF38477.857ENSPPAG00000042457CPSF38071.779Pan_paniscus
ENSMMOG00000011923CPSF38477.857ENSPPRG00000016790CPSF37777.857Panthera_pardus
ENSMMOG00000011923CPSF38477.857ENSPTIG00000003920CPSF37877.857Panthera_tigris_altaica
ENSMMOG00000011923CPSF38477.857ENSPTRG00000011638CPSF38071.779Pan_troglodytes
ENSMMOG00000011923CPSF38477.857ENSPANG00000016798CPSF38071.779Papio_anubis
ENSMMOG00000011923CPSF38580.142ENSPKIG00000023646cpsf37980.142Paramormyrops_kingsleyae
ENSMMOG00000011923CPSF38477.857ENSPSIG00000016144CPSF37377.857Pelodiscus_sinensis
ENSMMOG00000011923CPSF38670.968ENSPMGG00000006141-7770.968Periophthalmus_magnuspinnatus
ENSMMOG00000011923CPSF38477.857ENSPEMG00000017668Cpsf38071.779Peromyscus_maniculatus_bairdii
ENSMMOG00000011923CPSF39043.750ENSPMAG00000004841cpsf310053.102Petromyzon_marinus
ENSMMOG00000011923CPSF38477.857ENSPCIG00000009823CPSF39854.531Phascolarctos_cinereus
ENSMMOG00000011923CPSF38578.571ENSPFOG00000010418-8071.726Poecilia_formosa
ENSMMOG00000011923CPSF38576.786ENSPFOG00000015922cpsf38070.238Poecilia_formosa
ENSMMOG00000011923CPSF38576.786ENSPLAG00000000882cpsf38070.238Poecilia_latipinna
ENSMMOG00000011923CPSF36350.122ENSPLAG00000021300-10050.728Poecilia_latipinna
ENSMMOG00000011923CPSF38576.786ENSPMEG00000018309cpsf38070.238Poecilia_mexicana
ENSMMOG00000011923CPSF38578.571ENSPREG00000004482CPSF37971.726Poecilia_reticulata
ENSMMOG00000011923CPSF38577.660ENSPREG00000014875cpsf37877.660Poecilia_reticulata
ENSMMOG00000011923CPSF38478.626ENSPPYG00000012666CPSF37972.078Pongo_abelii
ENSMMOG00000011923CPSF37754.545ENSPCAG00000015042CPSF35060.736Procavia_capensis
ENSMMOG00000011923CPSF39944.248ENSPCOG00000023016CPSF39944.224Propithecus_coquereli
ENSMMOG00000011923CPSF38477.857ENSPVAG00000005324CPSF37377.857Pteropus_vampyrus
ENSMMOG00000011923CPSF36880.851ENSPNYG00000021047CPSF36880.851Pundamilia_nyererei
ENSMMOG00000011923CPSF38578.014ENSPNYG00000004405cpsf37878.014Pundamilia_nyererei
ENSMMOG00000011923CPSF38579.787ENSPNAG00000023060cpsf37979.787Pygocentrus_nattereri
ENSMMOG00000011923CPSF38477.857ENSRNOG00000052418Cpsf37377.857Rattus_norvegicus
ENSMMOG00000011923CPSF37977.857ENSRBIG00000041615CPSF37377.857Rhinopithecus_bieti
ENSMMOG00000011923CPSF38477.857ENSRROG00000033792CPSF38071.779Rhinopithecus_roxellana
ENSMMOG00000011923CPSF37677.857ENSSBOG00000027263CPSF36677.857Saimiri_boliviensis_boliviensis
ENSMMOG00000011923CPSF38477.857ENSSHAG00000007024CPSF38071.472Sarcophilus_harrisii
ENSMMOG00000011923CPSF38580.142ENSSFOG00015002108cpsf37980.142Scleropages_formosus
ENSMMOG00000011923CPSF38578.929ENSSMAG00000020534CPSF37972.321Scophthalmus_maximus
ENSMMOG00000011923CPSF38477.500ENSSDUG00000002828cpsf37177.500Seriola_dumerili
ENSMMOG00000011923CPSF38581.560ENSSDUG00000018498CPSF37981.560Seriola_dumerili
ENSMMOG00000011923CPSF38581.560ENSSLDG00000005234CPSF37881.560Seriola_lalandi_dorsalis
ENSMMOG00000011923CPSF38477.143ENSSLDG00000008469cpsf37870.238Seriola_lalandi_dorsalis
ENSMMOG00000011923CPSF38870.000ENSSARG00000005186CPSF36283.333Sorex_araneus
ENSMMOG00000011923CPSF38474.296ENSSPUG00000015525CPSF37374.296Sphenodon_punctatus
ENSMMOG00000011923CPSF38581.560ENSSPAG00000002906CPSF37881.560Stegastes_partitus
ENSMMOG00000011923CPSF38477.143ENSSPAG00000018579cpsf38070.238Stegastes_partitus
ENSMMOG00000011923CPSF38379.779ENSSSCG00000020799CPSF37879.779Sus_scrofa
ENSMMOG00000011923CPSF38477.857ENSTGUG00000013016CPSF38071.254Taeniopygia_guttata
ENSMMOG00000011923CPSF38477.500ENSTRUG00000007030cpsf36392.157Takifugu_rubripes
ENSMMOG00000011923CPSF38469.892ENSTBEG00000002707CPSF37864.615Tupaia_belangeri
ENSMMOG00000011923CPSF36692.157ENSTTRG00000000861CPSF37160.443Tursiops_truncatus
ENSMMOG00000011923CPSF37977.857ENSUAMG00000007535CPSF36877.857Ursus_americanus
ENSMMOG00000011923CPSF38477.857ENSUMAG00000003676CPSF37777.857Ursus_maritimus
ENSMMOG00000011923CPSF37877.857ENSVPAG00000008041CPSF37477.857Vicugna_pacos
ENSMMOG00000011923CPSF38477.857ENSVVUG00000002194CPSF38071.779Vulpes_vulpes
ENSMMOG00000011923CPSF39951.572ENSXETG00000008263cpsf39950.360Xenopus_tropicalis
ENSMMOG00000011923CPSF38576.786ENSXCOG00000019695cpsf38069.940Xiphophorus_couchianus
ENSMMOG00000011923CPSF38578.571ENSXMAG00000027291CPSF38071.726Xiphophorus_maculatus
ENSMMOG00000011923CPSF38576.786ENSXMAG00000009784cpsf37776.786Xiphophorus_maculatus

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