EuRBPDB

Description

Ensembl ID: ENSMMOG00000012143 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.3 (1 of many)
Alias: fb55c03|fb78a04|fj36h04|wu:fb55c03|wu:fb78a04|wu:fj36h04|zgc:56141|zgc:77000
Full Name: RNA binding motif protein 4.3
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 2287 bases
Position: chrKV751398.1:12135-14421
Accession: ZDB-GENE-040426-1938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000015974	RRM_5	PF13893.6	3.2e-11	1	2
ENSMMOP00000015974	RRM_5	PF13893.6	3.2e-11	2	2
ENSMMOP00000015972	RRM_5	PF13893.6	3.4e-11	1	2
ENSMMOP00000015972	RRM_5	PF13893.6	3.4e-11	2	2
ENSMMOP00000015974	RRM_1	PF00076.22	1.2e-28	1	2
ENSMMOP00000015974	RRM_1	PF00076.22	1.2e-28	2	2
ENSMMOP00000015972	RRM_1	PF00076.22	1.3e-28	1	2
ENSMMOP00000015972	RRM_1	PF00076.22	1.3e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000016240	-	516	-	ENSMMOP00000015974	171 (aa)	-	-
ENSMMOT00000016238	-	522	-	ENSMMOP00000015972	173 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000012143	rbm4.3	88	50.000	ENSMMOG00000020484	-	86	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000012143	rbm4.3	96	79.532	ENSAMXG00000040224	rbm4.3	80	70.466	Astyanax_mexicanus
ENSMMOG00000012143	rbm4.3	88	86.000	ENSFHEG00000023137	rbm4.3	52	83.333	Fundulus_heteroclitus
ENSMMOG00000012143	rbm4.3	87	86.232	ENSKMAG00000017456	rbm4.3	95	86.232	Kryptolebias_marmoratus
ENSMMOG00000012143	rbm4.3	88	86.667	ENSKMAG00000017468	rbm4.3	50	84.524	Kryptolebias_marmoratus
ENSMMOG00000012143	rbm4.3	94	75.460	ENSLBEG00000001025	rbm4.3	68	78.000	Labrus_bergylta
ENSMMOG00000012143	rbm4.3	97	68.182	ENSMALG00000003032	rbm4.3	50	73.885	Monopterus_albus
ENSMMOG00000012143	rbm4.3	98	80.117	ENSORLG00000011589	rbm4.3	50	80.117	Oryzias_latipes
ENSMMOG00000012143	rbm4.3	98	80.117	ENSORLG00020012474	rbm4.3	50	80.117	Oryzias_latipes_hni
ENSMMOG00000012143	rbm4.3	86	83.673	ENSOMEG00000021202	-	95	80.892	Oryzias_melastigma
ENSMMOG00000012143	rbm4.3	98	82.738	ENSPKIG00000007001	rbm4.3	67	84.713	Paramormyrops_kingsleyae
ENSMMOG00000012143	rbm4.3	87	70.548	ENSPMGG00000005450	-	79	70.548	Periophthalmus_magnuspinnatus
ENSMMOG00000012143	rbm4.3	89	88.889	ENSPLAG00000006107	rbm4.3	88	88.889	Poecilia_latipinna
ENSMMOG00000012143	rbm4.3	98	82.738	ENSPREG00000002156	rbm4.3	51	82.738	Poecilia_reticulata
ENSMMOG00000012143	rbm4.3	88	84.667	ENSXCOG00000006010	rbm4.3	93	84.667	Xiphophorus_couchianus