EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000012515 (Gene tree)
Gene ID: -
Gene Symbol: polr2a
Alias: im:7136071
Full Name: polymerase (RNA) II (DNA directed) polypeptide A
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 10578 bases
Position: chrKV751366.1:5007145-5017722
Accession: ZDB-GENE-041008-78
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000016409	RNA_pol_Rpb1_5	PF04998.17	2e-101	1	1
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	1	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	2	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	3	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	4	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	5	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	6	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	7	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	8	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	9	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	10	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	11	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	12	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	13	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	14	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	15	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	16	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	17	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	18	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	19	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	20	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	21	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	22	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	23	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	24	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	25	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	26	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	27	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	28	29
ENSMMOP00000016409	RNA_pol_Rpb1_R	PF05001.13	8.8e-16	29	29
ENSMMOP00000016409	RNA_pol_Rpb1_4	PF05000.17	1.1e-37	1	1
ENSMMOP00000016409	RNA_pol_Rpb1_2	PF00623.20	5.3e-75	1	1
ENSMMOP00000016409	RNA_pol_Rpb1_3	PF04983.18	2.6e-50	1	1
ENSMMOP00000016409	RNA_pol_Rpb1_1	PF04997.12	2.1e-108	1	1
ENSMMOP00000016409	RNA_pol_Rpb1_7	PF04990.12	2.6e-54	1	1
ENSMMOP00000016409	RNA_pol_Rpb1_6	PF04992.14	4.8e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000016683	-	5901	-	ENSMMOP00000016409	1966 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000012515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000012515's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000012515	polr2a	65	38.944	ENSMMOG00000013822	polr3a	91	38.944

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000012515	polr2a	82	98.449	ENSAPOG00000006552	polr2a	82	98.449	Acanthochromis_polyacanthus
ENSMMOG00000012515	polr2a	95	93.432	ENSAMEG00000016265	-	87	93.441	Ailuropoda_melanoleuca
ENSMMOG00000012515	polr2a	92	95.099	ENSACIG00000015982	polr2a	84	95.720	Amphilophus_citrinellus
ENSMMOG00000012515	polr2a	88	96.154	ENSAOCG00000004255	polr2a	90	96.154	Amphiprion_ocellaris
ENSMMOG00000012515	polr2a	92	98.511	ENSAPEG00000012623	polr2a	90	98.511	Amphiprion_percula
ENSMMOG00000012515	polr2a	92	97.705	ENSATEG00000019644	polr2a	90	97.705	Anabas_testudineus
ENSMMOG00000012515	polr2a	95	94.348	ENSACAG00000014561	POLR2A	87	94.355	Anolis_carolinensis
ENSMMOG00000012515	polr2a	95	93.793	ENSANAG00000020093	-	87	93.800	Aotus_nancymaae
ENSMMOG00000012515	polr2a	92	97.705	ENSACLG00000006735	polr2a	90	97.705	Astatotilapia_calliptera
ENSMMOG00000012515	polr2a	92	96.836	ENSAMXG00000020046	polr2a	90	96.836	Astyanax_mexicanus
ENSMMOG00000012515	polr2a	95	93.793	ENSBTAG00000046765	POLR2A	87	93.800	Bos_taurus
ENSMMOG00000012515	polr2a	93	93.731	ENSCAFG00000016532	POLR2A	90	93.738	Canis_familiaris
ENSMMOG00000012515	polr2a	95	92.866	ENSCAFG00020007929	-	87	92.875	Canis_lupus_dingo
ENSMMOG00000012515	polr2a	95	93.793	ENSCHIG00000027173	-	87	93.800	Capra_hircus
ENSMMOG00000012515	polr2a	95	91.372	ENSTSYG00000012803	-	84	91.754	Carlito_syrichta
ENSMMOG00000012515	polr2a	94	90.384	ENSCAPG00000001882	-	95	92.857	Cavia_aperea
ENSMMOG00000012515	polr2a	96	90.328	ENSCPOG00000014812	-	90	92.622	Cavia_porcellus
ENSMMOG00000012515	polr2a	95	93.793	ENSCCAG00000020938	-	87	93.800	Cebus_capucinus
ENSMMOG00000012515	polr2a	95	93.731	ENSCATG00000013680	-	87	93.738	Cercocebus_atys
ENSMMOG00000012515	polr2a	95	93.669	ENSCLAG00000012196	-	87	93.676	Chinchilla_lanigera
ENSMMOG00000012515	polr2a	95	85.133	ENSCSAG00000011644	-	87	85.151	Chlorocebus_sabaeus
ENSMMOG00000012515	polr2a	92	90.435	ENSCPBG00000012697	POLR2A	94	90.453	Chrysemys_picta_bellii
ENSMMOG00000012515	polr2a	88	79.630	ENSCSAVG00000008334	-	98	79.439	Ciona_savignyi
ENSMMOG00000012515	polr2a	95	93.048	ENSCANG00000010622	-	87	93.056	Colobus_angolensis_palliatus
ENSMMOG00000012515	polr2a	91	87.400	ENSCGRG00001003538	Polr2a	85	86.333	Cricetulus_griseus_chok1gshd
ENSMMOG00000012515	polr2a	86	86.170	ENSCGRG00000012105	Polr2a	89	90.135	Cricetulus_griseus_crigri
ENSMMOG00000012515	polr2a	92	96.960	ENSCSEG00000002635	polr2a	90	96.960	Cynoglossus_semilaevis
ENSMMOG00000012515	polr2a	92	97.519	ENSCVAG00000005156	polr2a	90	97.519	Cyprinodon_variegatus
ENSMMOG00000012515	polr2a	94	95.970	ENSDARG00000099966	polr2a	84	95.970	Danio_rerio
ENSMMOG00000012515	polr2a	95	90.488	ENSDNOG00000016482	-	87	90.500	Dasypus_novemcinctus
ENSMMOG00000012515	polr2a	95	93.793	ENSDORG00000008667	Polr2a	87	93.800	Dipodomys_ordii
ENSMMOG00000012515	polr2a	96	70.576	FBgn0003277	RpII215	85	75.093	Drosophila_melanogaster
ENSMMOG00000012515	polr2a	90	89.350	ENSETEG00000002540	-	81	90.411	Echinops_telfairi
ENSMMOG00000012515	polr2a	82	87.149	ENSEBUG00000013967	polr2a	94	87.135	Eptatretus_burgeri
ENSMMOG00000012515	polr2a	94	91.744	ENSEASG00005019114	-	85	91.754	Equus_asinus_asinus
ENSMMOG00000012515	polr2a	95	93.793	ENSECAG00000018485	POLR2A	87	93.800	Equus_caballus
ENSMMOG00000012515	polr2a	83	93.725	ENSEEUG00000001154	-	94	93.725	Erinaceus_europaeus
ENSMMOG00000012515	polr2a	91	91.554	ENSELUG00000014284	polr2a	93	92.232	Esox_lucius
ENSMMOG00000012515	polr2a	95	93.855	ENSFDAG00000008287	-	87	93.862	Fukomys_damarensis
ENSMMOG00000012515	polr2a	96	97.667	ENSFHEG00000001768	polr2a	98	97.667	Fundulus_heteroclitus
ENSMMOG00000012515	polr2a	94	92.229	ENSGMOG00000007725	polr2a	100	92.252	Gadus_morhua
ENSMMOG00000012515	polr2a	95	94.479	ENSGAFG00000005389	polr2a	99	93.048	Gambusia_affinis
ENSMMOG00000012515	polr2a	96	93.591	ENSGACG00000019366	polr2a	100	93.366	Gasterosteus_aculeatus
ENSMMOG00000012515	polr2a	95	91.765	ENSGGOG00000014800	-	96	92.792	Gorilla_gorilla
ENSMMOG00000012515	polr2a	96	98.038	ENSHBUG00000018937	polr2a	99	98.038	Haplochromis_burtoni
ENSMMOG00000012515	polr2a	95	93.855	ENSHGLG00000012381	POLR2A	87	93.862	Heterocephalus_glaber_female
ENSMMOG00000012515	polr2a	95	93.855	ENSHGLG00100014843	POLR2A	87	93.862	Heterocephalus_glaber_male
ENSMMOG00000012515	polr2a	92	97.022	ENSHCOG00000011874	polr2a	90	97.022	Hippocampus_comes
ENSMMOG00000012515	polr2a	92	96.402	ENSIPUG00000002613	Polr2a	90	96.402	Ictalurus_punctatus
ENSMMOG00000012515	polr2a	95	93.793	ENSSTOG00000001304	-	87	93.800	Ictidomys_tridecemlineatus
ENSMMOG00000012515	polr2a	95	93.793	ENSJJAG00000013049	Polr2a	87	93.800	Jaculus_jaculus
ENSMMOG00000012515	polr2a	81	76.804	ENSKMAG00000016343	polr2a	85	78.150	Kryptolebias_marmoratus
ENSMMOG00000012515	polr2a	92	97.705	ENSLBEG00000027652	polr2a	90	97.705	Labrus_bergylta
ENSMMOG00000012515	polr2a	90	85.073	ENSLACG00000012071	POLR2A	87	85.082	Latimeria_chalumnae
ENSMMOG00000012515	polr2a	94	96.282	ENSLOCG00000013863	polr2a	93	95.841	Lepisosteus_oculatus
ENSMMOG00000012515	polr2a	95	93.793	ENSLAFG00000008626	-	91	93.800	Loxodonta_africana
ENSMMOG00000012515	polr2a	50	92.952	ENSMFAG00000007042	-	99	92.952	Macaca_fascicularis
ENSMMOG00000012515	polr2a	95	93.731	ENSMMUG00000023620	-	87	93.738	Macaca_mulatta
ENSMMOG00000012515	polr2a	95	93.296	ENSMNEG00000040407	-	84	93.304	Macaca_nemestrina
ENSMMOG00000012515	polr2a	93	89.304	ENSMLEG00000030263	-	99	92.952	Mandrillus_leucophaeus
ENSMMOG00000012515	polr2a	92	97.643	ENSMAMG00000003351	polr2a	90	97.643	Mastacembelus_armatus
ENSMMOG00000012515	polr2a	92	97.705	ENSMZEG00005021429	polr2a	90	97.705	Maylandia_zebra
ENSMMOG00000012515	polr2a	50	93.986	ENSMAUG00000021055	-	99	93.986	Mesocricetus_auratus
ENSMMOG00000012515	polr2a	95	93.793	ENSMICG00000013372	-	98	93.552	Microcebus_murinus
ENSMMOG00000012515	polr2a	96	89.405	ENSMOCG00000018279	Polr2a	97	89.617	Microtus_ochrogaster
ENSMMOG00000012515	polr2a	95	93.606	ENSMODG00000007009	-	87	93.614	Monodelphis_domestica
ENSMMOG00000012515	polr2a	90	94.734	ENSMALG00000008716	polr2a	86	95.347	Monopterus_albus
ENSMMOG00000012515	polr2a	95	93.793	MGP_CAROLIEiJ_G0016587	Polr2a	87	93.800	Mus_caroli
ENSMMOG00000012515	polr2a	95	93.793	ENSMUSG00000005198	Polr2a	87	93.800	Mus_musculus
ENSMMOG00000012515	polr2a	95	91.718	MGP_PahariEiJ_G0017718	Polr2a	87	91.728	Mus_pahari
ENSMMOG00000012515	polr2a	95	93.793	MGP_SPRETEiJ_G0017423	Polr2a	87	93.800	Mus_spretus
ENSMMOG00000012515	polr2a	95	93.793	ENSMPUG00000009648	-	87	93.800	Mustela_putorius_furo
ENSMMOG00000012515	polr2a	95	93.180	ENSMLUG00000009088	-	87	93.189	Myotis_lucifugus
ENSMMOG00000012515	polr2a	95	93.793	ENSNGAG00000002543	Polr2a	87	93.800	Nannospalax_galili
ENSMMOG00000012515	polr2a	92	94.975	ENSNBRG00000002005	polr2a	84	95.533	Neolamprologus_brichardi
ENSMMOG00000012515	polr2a	95	92.384	ENSNLEG00000009460	-	84	92.393	Nomascus_leucogenys
ENSMMOG00000012515	polr2a	89	95.316	ENSMEUG00000008611	-	91	86.189	Notamacropus_eugenii
ENSMMOG00000012515	polr2a	80	93.493	ENSOPRG00000015116	-	99	93.493	Ochotona_princeps
ENSMMOG00000012515	polr2a	89	93.721	ENSODEG00000017674	-	90	89.183	Octodon_degus
ENSMMOG00000012515	polr2a	92	98.015	ENSONIG00000009231	polr2a	90	98.015	Oreochromis_niloticus
ENSMMOG00000012515	polr2a	94	92.581	ENSOCUG00000017929	-	97	93.676	Oryctolagus_cuniculus
ENSMMOG00000012515	polr2a	92	97.146	ENSORLG00000006431	polr2a	90	97.146	Oryzias_latipes
ENSMMOG00000012515	polr2a	92	97.146	ENSORLG00020010235	polr2a	90	97.146	Oryzias_latipes_hni
ENSMMOG00000012515	polr2a	92	97.022	ENSORLG00015007075	polr2a	90	97.022	Oryzias_latipes_hsok
ENSMMOG00000012515	polr2a	94	97.075	ENSOMEG00000010713	polr2a	100	97.075	Oryzias_melastigma
ENSMMOG00000012515	polr2a	95	93.855	ENSOGAG00000033608	-	87	93.862	Otolemur_garnettii
ENSMMOG00000012515	polr2a	82	93.793	ENSOARG00000013874	-	85	93.800	Ovis_aries
ENSMMOG00000012515	polr2a	94	91.255	ENSPPAG00000043734	-	82	91.259	Pan_paniscus
ENSMMOG00000012515	polr2a	95	92.384	ENSPTRG00000008691	POLR2A	84	92.393	Pan_troglodytes
ENSMMOG00000012515	polr2a	95	93.048	ENSPANG00000024099	-	87	93.056	Papio_anubis
ENSMMOG00000012515	polr2a	77	95.194	ENSPKIG00000005727	polr2a	85	80.556	Paramormyrops_kingsleyae
ENSMMOG00000012515	polr2a	95	92.345	ENSPSIG00000014006	POLR2A	99	92.255	Pelodiscus_sinensis
ENSMMOG00000012515	polr2a	96	96.898	ENSPMGG00000019734	polr2a	99	96.898	Periophthalmus_magnuspinnatus
ENSMMOG00000012515	polr2a	95	93.793	ENSPEMG00000012521	Polr2a	87	93.800	Peromyscus_maniculatus_bairdii
ENSMMOG00000012515	polr2a	86	93.610	ENSPCIG00000028851	-	82	93.610	Phascolarctos_cinereus
ENSMMOG00000012515	polr2a	96	97.826	ENSPFOG00000007890	polr2a	99	97.826	Poecilia_formosa
ENSMMOG00000012515	polr2a	96	97.826	ENSPLAG00000007399	polr2a	99	97.826	Poecilia_latipinna
ENSMMOG00000012515	polr2a	96	97.826	ENSPMEG00000002071	polr2a	99	97.826	Poecilia_mexicana
ENSMMOG00000012515	polr2a	92	97.395	ENSPREG00000013122	polr2a	90	97.395	Poecilia_reticulata
ENSMMOG00000012515	polr2a	91	93.793	ENSPPYG00000007924	-	82	93.800	Pongo_abelii
ENSMMOG00000012515	polr2a	87	95.000	ENSPCAG00000006951	-	79	95.000	Procavia_capensis
ENSMMOG00000012515	polr2a	95	92.620	ENSPCOG00000025260	-	87	92.629	Propithecus_coquereli
ENSMMOG00000012515	polr2a	95	93.482	ENSPVAG00000005069	-	87	93.490	Pteropus_vampyrus
ENSMMOG00000012515	polr2a	92	97.767	ENSPNYG00000022340	polr2a	99	90.615	Pundamilia_nyererei
ENSMMOG00000012515	polr2a	92	96.898	ENSPNAG00000011237	polr2a	90	96.898	Pygocentrus_nattereri
ENSMMOG00000012515	polr2a	95	93.731	ENSRNOG00000028834	Polr2a	93	93.738	Rattus_norvegicus
ENSMMOG00000012515	polr2a	91	91.682	ENSRBIG00000002471	-	86	91.692	Rhinopithecus_bieti
ENSMMOG00000012515	polr2a	91	93.731	ENSRROG00000029583	-	84	93.738	Rhinopithecus_roxellana
ENSMMOG00000012515	polr2a	82	50.031	YDL140C	RPO21	98	50.547	Saccharomyces_cerevisiae
ENSMMOG00000012515	polr2a	95	93.793	ENSSBOG00000000808	-	87	93.800	Saimiri_boliviensis_boliviensis
ENSMMOG00000012515	polr2a	95	93.606	ENSSHAG00000002858	-	84	93.614	Sarcophilus_harrisii
ENSMMOG00000012515	polr2a	95	93.672	ENSSFOG00015023275	polr2a	84	96.464	Scleropages_formosus
ENSMMOG00000012515	polr2a	92	97.457	ENSSMAG00000009137	polr2a	90	97.457	Scophthalmus_maximus
ENSMMOG00000012515	polr2a	92	97.953	ENSSDUG00000020466	polr2a	90	97.953	Seriola_dumerili
ENSMMOG00000012515	polr2a	92	97.891	ENSSLDG00000020613	polr2a	90	97.891	Seriola_lalandi_dorsalis
ENSMMOG00000012515	polr2a	95	89.474	ENSSARG00000005875	-	99	90.273	Sorex_araneus
ENSMMOG00000012515	polr2a	96	98.391	ENSSPAG00000016741	polr2a	94	98.391	Stegastes_partitus
ENSMMOG00000012515	polr2a	95	92.924	ENSSSCG00000028278	-	87	92.932	Sus_scrofa
ENSMMOG00000012515	polr2a	95	86.467	ENSTRUG00000012320	polr2a	80	90.062	Takifugu_rubripes
ENSMMOG00000012515	polr2a	92	96.650	ENSTNIG00000010136	polr2a	98	96.650	Tetraodon_nigroviridis
ENSMMOG00000012515	polr2a	70	93.824	ENSTBEG00000013294	-	56	94.286	Tupaia_belangeri
ENSMMOG00000012515	polr2a	95	92.179	ENSTTRG00000014273	-	87	92.188	Tursiops_truncatus
ENSMMOG00000012515	polr2a	94	90.960	ENSUAMG00000014866	-	96	93.383	Ursus_americanus
ENSMMOG00000012515	polr2a	88	92.179	ENSUMAG00000015732	-	85	92.179	Ursus_maritimus
ENSMMOG00000012515	polr2a	65	96.739	ENSVPAG00000008842	-	76	96.739	Vicugna_pacos
ENSMMOG00000012515	polr2a	91	93.731	ENSVVUG00000027878	-	89	93.738	Vulpes_vulpes
ENSMMOG00000012515	polr2a	92	93.707	ENSXETG00000012465	polr2a	84	93.715	Xenopus_tropicalis
ENSMMOG00000012515	polr2a	90	95.099	ENSXCOG00000001804	polr2a	98	95.099	Xiphophorus_couchianus
ENSMMOG00000012515	polr2a	92	97.395	ENSXMAG00000015687	polr2a	90	97.395	Xiphophorus_maculatus