EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000012525 (Gene tree)
Gene ID: -
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: high density lipoprotein binding protein b
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 12472 bases
Position: chrKV751366.1:5076388-5088859
Accession: ZDB-GENE-030131-6822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000016426	KH_1	PF00013.29	1.9e-187	1	14
ENSMMOP00000016426	KH_1	PF00013.29	1.9e-187	2	14
ENSMMOP00000016426	KH_1	PF00013.29	1.9e-187	3	14
ENSMMOP00000016426	KH_1	PF00013.29	1.9e-187	4	14
ENSMMOP00000016426	KH_1	PF00013.29	1.9e-187	5	14
ENSMMOP00000016426	KH_1	PF00013.29	1.9e-187	6	14
ENSMMOP00000016426	KH_1	PF00013.29	1.9e-187	7	14
ENSMMOP00000016426	KH_1	PF00013.29	1.9e-187	8	14
ENSMMOP00000016426	KH_1	PF00013.29	1.9e-187	9	14
ENSMMOP00000016426	KH_1	PF00013.29	1.9e-187	10	14
ENSMMOP00000016426	KH_1	PF00013.29	1.9e-187	11	14
ENSMMOP00000016426	KH_1	PF00013.29	1.9e-187	12	14
ENSMMOP00000016426	KH_1	PF00013.29	1.9e-187	13	14
ENSMMOP00000016426	KH_1	PF00013.29	1.9e-187	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000016700	-	3795	-	ENSMMOP00000016426	1264 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000012525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000012525's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000012525	hdlbpb	97	66.963	ENSMMOG00000006880	hdlbpa	99	66.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000012525	hdlbpb	100	96.372	ENSAPOG00000006904	hdlbpb	100	96.372	Acanthochromis_polyacanthus
ENSMMOG00000012525	hdlbpb	100	89.929	ENSACIG00000016154	hdlbpb	100	90.945	Amphilophus_citrinellus
ENSMMOG00000012525	hdlbpb	100	96.845	ENSAOCG00000004083	hdlbpb	100	96.845	Amphiprion_ocellaris
ENSMMOG00000012525	hdlbpb	100	96.767	ENSAPEG00000012270	hdlbpb	100	96.767	Amphiprion_percula
ENSMMOG00000012525	hdlbpb	100	95.347	ENSATEG00000019877	hdlbpb	100	95.032	Anabas_testudineus
ENSMMOG00000012525	hdlbpb	100	81.517	ENSACAG00000003606	-	100	81.517	Anolis_carolinensis
ENSMMOG00000012525	hdlbpb	100	94.874	ENSACLG00000006618	hdlbpb	100	94.874	Astatotilapia_calliptera
ENSMMOG00000012525	hdlbpb	100	76.277	ENSAMXG00000019946	hdlbpb	100	76.198	Astyanax_mexicanus
ENSMMOG00000012525	hdlbpb	100	93.844	ENSCSEG00000000955	hdlbpb	100	93.844	Cynoglossus_semilaevis
ENSMMOG00000012525	hdlbpb	100	93.927	ENSCVAG00000005345	hdlbpb	100	93.927	Cyprinodon_variegatus
ENSMMOG00000012525	hdlbpb	99	84.901	ENSDARG00000061864	hdlbpb	99	84.822	Danio_rerio
ENSMMOG00000012525	hdlbpb	92	69.666	ENSEBUG00000005304	hdlbpb	96	69.666	Eptatretus_burgeri
ENSMMOG00000012525	hdlbpb	100	78.031	ENSELUG00000019925	hdlbpb	100	78.031	Esox_lucius
ENSMMOG00000012525	hdlbpb	87	35.210	ENSFHEG00000001701	hdlbpb	100	89.100	Fundulus_heteroclitus
ENSMMOG00000012525	hdlbpb	95	87.836	ENSGMOG00000004522	hdlbpb	78	87.836	Gadus_morhua
ENSMMOG00000012525	hdlbpb	100	94.085	ENSGAFG00000005278	hdlbpb	100	93.770	Gambusia_affinis
ENSMMOG00000012525	hdlbpb	99	91.548	ENSGACG00000019361	hdlbpb	100	91.548	Gasterosteus_aculeatus
ENSMMOG00000012525	hdlbpb	100	94.716	ENSHBUG00000018434	hdlbpb	100	94.716	Haplochromis_burtoni
ENSMMOG00000012525	hdlbpb	100	83.833	ENSIPUG00000003291	HDLBP	100	84.206	Ictalurus_punctatus
ENSMMOG00000012525	hdlbpb	100	94.637	ENSKMAG00000016562	hdlbpb	100	94.322	Kryptolebias_marmoratus
ENSMMOG00000012525	hdlbpb	100	95.662	ENSLBEG00000027855	hdlbpb	100	95.347	Labrus_bergylta
ENSMMOG00000012525	hdlbpb	100	84.730	ENSLACG00000007661	hdlbpb	90	84.730	Latimeria_chalumnae
ENSMMOG00000012525	hdlbpb	100	82.320	ENSLOCG00000013909	hdlbpb	100	82.320	Lepisosteus_oculatus
ENSMMOG00000012525	hdlbpb	100	95.899	ENSMAMG00000003035	hdlbpb	100	95.899	Mastacembelus_armatus
ENSMMOG00000012525	hdlbpb	100	94.874	ENSMZEG00005021465	hdlbpb	100	94.874	Maylandia_zebra
ENSMMOG00000012525	hdlbpb	100	93.454	ENSMALG00000008938	hdlbpb	100	93.139	Monopterus_albus
ENSMMOG00000012525	hdlbpb	100	94.953	ENSNBRG00000002236	hdlbpb	100	94.953	Neolamprologus_brichardi
ENSMMOG00000012525	hdlbpb	100	94.637	ENSONIG00000009211	hdlbpb	100	94.637	Oreochromis_niloticus
ENSMMOG00000012525	hdlbpb	100	93.370	ENSORLG00000006581	hdlbpb	100	93.370	Oryzias_latipes
ENSMMOG00000012525	hdlbpb	100	93.370	ENSORLG00020010012	hdlbpb	100	93.370	Oryzias_latipes_hni
ENSMMOG00000012525	hdlbpb	100	93.528	ENSORLG00015006863	hdlbpb	100	93.528	Oryzias_latipes_hsok
ENSMMOG00000012525	hdlbpb	100	93.844	ENSOMEG00000011131	hdlbpb	100	93.844	Oryzias_melastigma
ENSMMOG00000012525	hdlbpb	100	88.547	ENSPKIG00000005966	hdlbpb	100	88.626	Paramormyrops_kingsleyae
ENSMMOG00000012525	hdlbpb	86	91.667	ENSPMGG00000019853	hdlbpb	99	91.667	Periophthalmus_magnuspinnatus
ENSMMOG00000012525	hdlbpb	94	74.123	ENSPMAG00000002131	hdlbpb	100	74.123	Petromyzon_marinus
ENSMMOG00000012525	hdlbpb	92	63.787	ENSPMAG00000000249	-	99	63.578	Petromyzon_marinus
ENSMMOG00000012525	hdlbpb	100	93.370	ENSPFOG00000008755	hdlbpb	100	93.058	Poecilia_formosa
ENSMMOG00000012525	hdlbpb	100	94.479	ENSPLAG00000007055	hdlbpb	100	94.164	Poecilia_latipinna
ENSMMOG00000012525	hdlbpb	100	94.401	ENSPMEG00000001952	hdlbpb	100	94.085	Poecilia_mexicana
ENSMMOG00000012525	hdlbpb	100	94.401	ENSPREG00000012848	hdlbpb	100	94.085	Poecilia_reticulata
ENSMMOG00000012525	hdlbpb	100	95.099	ENSPNYG00000022467	hdlbpb	100	95.099	Pundamilia_nyererei
ENSMMOG00000012525	hdlbpb	100	86.572	ENSPNAG00000011104	hdlbpb	100	86.493	Pygocentrus_nattereri
ENSMMOG00000012525	hdlbpb	100	87.283	ENSSFOG00015023199	hdlbpb	100	87.204	Scleropages_formosus
ENSMMOG00000012525	hdlbpb	100	95.347	ENSSMAG00000008790	hdlbpb	100	95.347	Scophthalmus_maximus
ENSMMOG00000012525	hdlbpb	100	96.527	ENSSDUG00000020694	hdlbpb	100	96.527	Seriola_dumerili
ENSMMOG00000012525	hdlbpb	100	96.206	ENSSLDG00000020807	hdlbpb	100	96.206	Seriola_lalandi_dorsalis
ENSMMOG00000012525	hdlbpb	100	81.991	ENSSPUG00000018688	-	100	81.991	Sphenodon_punctatus
ENSMMOG00000012525	hdlbpb	100	96.609	ENSSPAG00000016969	hdlbpb	100	96.609	Stegastes_partitus
ENSMMOG00000012525	hdlbpb	98	92.082	ENSTRUG00000012888	hdlbpb	99	91.766	Takifugu_rubripes
ENSMMOG00000012525	hdlbpb	99	93.500	ENSTNIG00000002555	hdlbpb	100	93.187	Tetraodon_nigroviridis
ENSMMOG00000012525	hdlbpb	100	68.913	ENSXCOG00000001797	hdlbpb	100	68.913	Xiphophorus_couchianus
ENSMMOG00000012525	hdlbpb	100	93.849	ENSXMAG00000015633	hdlbpb	100	93.533	Xiphophorus_maculatus