EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000012538 (Gene tree)
Gene ID: -
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor%2C mitochondrial 1
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 13731 bases
Position: chrKV751316.1:6912386-6926116
Accession: ZDB-GENE-061013-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000016444	GTP_EFTU	PF00009.27	2.9e-63	1	1
ENSMMOP00000016444	GTP_EFTU_D2	PF03144.25	3.8e-17	1	1
ENSMMOP00000016444	EFG_IV	PF03764.18	5.3e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000016718	-	2217	-	ENSMMOP00000016444	738 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000012538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000012538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000012538	gfm1	55	30.070	ENSMMOG00000020811	eftud2	54	30.070
ENSMMOG00000012538	gfm1	67	38.255	ENSMMOG00000000457	-	68	38.255
ENSMMOG00000012538	gfm1	93	33.563	ENSMMOG00000004758	gfm2	97	33.563
ENSMMOG00000012538	gfm1	73	38.255	ENSMMOG00000010594	eef2b	71	38.255

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000012538	gfm1	98	79.589	ENSG00000168827	GFM1	100	95.000	Homo_sapiens
ENSMMOG00000012538	gfm1	90	87.087	ENSAPOG00000016489	gfm1	95	87.087	Acanthochromis_polyacanthus
ENSMMOG00000012538	gfm1	97	80.780	ENSAMEG00000013542	GFM1	95	80.780	Ailuropoda_melanoleuca
ENSMMOG00000012538	gfm1	98	86.069	ENSACIG00000014465	gfm1	94	86.069	Amphilophus_citrinellus
ENSMMOG00000012538	gfm1	98	87.879	ENSAOCG00000006023	gfm1	97	87.879	Amphiprion_ocellaris
ENSMMOG00000012538	gfm1	98	87.603	ENSAPEG00000024499	gfm1	99	87.483	Amphiprion_percula
ENSMMOG00000012538	gfm1	98	91.322	ENSATEG00000013789	gfm1	97	91.322	Anabas_testudineus
ENSMMOG00000012538	gfm1	98	80.138	ENSAPLG00000005022	GFM1	100	80.138	Anas_platyrhynchos
ENSMMOG00000012538	gfm1	98	79.972	ENSACAG00000006829	GFM1	98	79.972	Anolis_carolinensis
ENSMMOG00000012538	gfm1	98	79.315	ENSANAG00000035983	GFM1	97	79.315	Aotus_nancymaae
ENSMMOG00000012538	gfm1	99	89.865	ENSACLG00000016586	gfm1	99	89.865	Astatotilapia_calliptera
ENSMMOG00000012538	gfm1	98	85.694	ENSAMXG00000013435	gfm1	97	85.694	Astyanax_mexicanus
ENSMMOG00000012538	gfm1	97	80.780	ENSBTAG00000027795	GFM1	95	80.780	Bos_taurus
ENSMMOG00000012538	gfm1	98	56.986	WBGene00009246	gfm-1	99	56.680	Caenorhabditis_elegans
ENSMMOG00000012538	gfm1	98	79.315	ENSCJAG00000000363	GFM1	97	79.315	Callithrix_jacchus
ENSMMOG00000012538	gfm1	97	80.919	ENSCAFG00000009006	GFM1	100	80.621	Canis_familiaris
ENSMMOG00000012538	gfm1	97	80.919	ENSCAFG00020005878	GFM1	98	80.919	Canis_lupus_dingo
ENSMMOG00000012538	gfm1	97	80.919	ENSCHIG00000015220	GFM1	95	80.919	Capra_hircus
ENSMMOG00000012538	gfm1	99	78.571	ENSTSYG00000002013	GFM1	99	78.571	Carlito_syrichta
ENSMMOG00000012538	gfm1	97	70.304	ENSCAPG00000005699	GFM1	97	70.304	Cavia_aperea
ENSMMOG00000012538	gfm1	97	80.668	ENSCPOG00000001194	GFM1	95	80.668	Cavia_porcellus
ENSMMOG00000012538	gfm1	98	79.178	ENSCCAG00000025561	GFM1	97	79.178	Cebus_capucinus
ENSMMOG00000012538	gfm1	98	80.000	ENSCATG00000037622	GFM1	97	80.000	Cercocebus_atys
ENSMMOG00000012538	gfm1	97	79.972	ENSCLAG00000002503	GFM1	95	79.972	Chinchilla_lanigera
ENSMMOG00000012538	gfm1	98	80.138	ENSCSAG00000012162	GFM1	97	80.138	Chlorocebus_sabaeus
ENSMMOG00000012538	gfm1	99	70.216	ENSCHOG00000004867	GFM1	98	70.216	Choloepus_hoffmanni
ENSMMOG00000012538	gfm1	98	80.801	ENSCPBG00000018367	GFM1	97	80.801	Chrysemys_picta_bellii
ENSMMOG00000012538	gfm1	95	59.155	ENSCING00000011960	-	92	59.155	Ciona_intestinalis
ENSMMOG00000012538	gfm1	95	60.085	ENSCSAVG00000008514	-	99	59.227	Ciona_savignyi
ENSMMOG00000012538	gfm1	98	80.000	ENSCANG00000031714	GFM1	97	80.000	Colobus_angolensis_palliatus
ENSMMOG00000012538	gfm1	97	80.614	ENSCGRG00001022095	GFM1	95	80.614	Cricetulus_griseus_chok1gshd
ENSMMOG00000012538	gfm1	97	80.614	ENSCGRG00000012043	GFM1	95	80.614	Cricetulus_griseus_crigri
ENSMMOG00000012538	gfm1	98	83.264	ENSCSEG00000017088	gfm1	99	83.264	Cynoglossus_semilaevis
ENSMMOG00000012538	gfm1	98	90.909	ENSCVAG00000004126	gfm1	99	89.231	Cyprinodon_variegatus
ENSMMOG00000012538	gfm1	100	81.879	ENSDARG00000063624	gfm1	99	81.879	Danio_rerio
ENSMMOG00000012538	gfm1	55	77.751	ENSDNOG00000016385	-	100	77.751	Dasypus_novemcinctus
ENSMMOG00000012538	gfm1	99	78.035	ENSDORG00000014165	Gfm1	97	78.035	Dipodomys_ordii
ENSMMOG00000012538	gfm1	95	69.263	FBgn0263133	mEFG1	95	69.263	Drosophila_melanogaster
ENSMMOG00000012538	gfm1	97	72.816	ENSETEG00000019197	GFM1	95	72.816	Echinops_telfairi
ENSMMOG00000012538	gfm1	91	62.315	ENSEBUG00000012794	gfm1	100	62.315	Eptatretus_burgeri
ENSMMOG00000012538	gfm1	97	59.583	ENSEEUG00000000429	GFM1	99	59.583	Erinaceus_europaeus
ENSMMOG00000012538	gfm1	98	86.501	ENSELUG00000014728	gfm1	97	86.501	Esox_lucius
ENSMMOG00000012538	gfm1	97	80.529	ENSFCAG00000013291	GFM1	98	78.841	Felis_catus
ENSMMOG00000012538	gfm1	91	80.000	ENSFALG00000007619	GFM1	100	80.000	Ficedula_albicollis
ENSMMOG00000012538	gfm1	97	79.750	ENSFDAG00000016559	GFM1	96	79.750	Fukomys_damarensis
ENSMMOG00000012538	gfm1	98	90.771	ENSFHEG00000006091	gfm1	97	90.771	Fundulus_heteroclitus
ENSMMOG00000012538	gfm1	98	85.970	ENSGMOG00000010161	gfm1	100	85.970	Gadus_morhua
ENSMMOG00000012538	gfm1	98	79.917	ENSGALG00000009634	GFM1	99	79.917	Gallus_gallus
ENSMMOG00000012538	gfm1	98	90.496	ENSGAFG00000012527	gfm1	97	90.496	Gambusia_affinis
ENSMMOG00000012538	gfm1	99	89.905	ENSGACG00000009864	gfm1	98	89.905	Gasterosteus_aculeatus
ENSMMOG00000012538	gfm1	98	79.863	ENSGGOG00000003085	GFM1	99	79.111	Gorilla_gorilla
ENSMMOG00000012538	gfm1	99	90.000	ENSHBUG00000002120	gfm1	99	90.000	Haplochromis_burtoni
ENSMMOG00000012538	gfm1	97	79.833	ENSHGLG00000016855	GFM1	95	79.833	Heterocephalus_glaber_female
ENSMMOG00000012538	gfm1	97	79.833	ENSHGLG00100013049	GFM1	95	79.833	Heterocephalus_glaber_male
ENSMMOG00000012538	gfm1	98	89.669	ENSHCOG00000007638	gfm1	97	89.669	Hippocampus_comes
ENSMMOG00000012538	gfm1	99	85.342	ENSIPUG00000005873	gfm1	98	85.342	Ictalurus_punctatus
ENSMMOG00000012538	gfm1	99	77.687	ENSSTOG00000010150	GFM1	99	77.687	Ictidomys_tridecemlineatus
ENSMMOG00000012538	gfm1	97	79.277	ENSJJAG00000016447	Gfm1	96	79.277	Jaculus_jaculus
ENSMMOG00000012538	gfm1	98	87.275	ENSKMAG00000020768	gfm1	97	86.915	Kryptolebias_marmoratus
ENSMMOG00000012538	gfm1	95	90.870	ENSLBEG00000021315	gfm1	100	90.870	Labrus_bergylta
ENSMMOG00000012538	gfm1	98	82.853	ENSLACG00000012295	GFM1	99	82.853	Latimeria_chalumnae
ENSMMOG00000012538	gfm1	98	79.589	ENSLOCG00000003778	gfm1	99	79.589	Lepisosteus_oculatus
ENSMMOG00000012538	gfm1	98	78.552	ENSLAFG00000010945	GFM1	99	78.056	Loxodonta_africana
ENSMMOG00000012538	gfm1	98	80.000	ENSMFAG00000035731	GFM1	97	80.000	Macaca_fascicularis
ENSMMOG00000012538	gfm1	98	80.000	ENSMMUG00000004961	GFM1	97	80.000	Macaca_mulatta
ENSMMOG00000012538	gfm1	98	79.724	ENSMNEG00000033245	GFM1	97	79.724	Macaca_nemestrina
ENSMMOG00000012538	gfm1	97	78.363	ENSMLEG00000030908	GFM1	99	78.108	Mandrillus_leucophaeus
ENSMMOG00000012538	gfm1	98	90.083	ENSMAMG00000011760	gfm1	97	90.083	Mastacembelus_armatus
ENSMMOG00000012538	gfm1	99	90.000	ENSMZEG00005016639	gfm1	99	90.000	Maylandia_zebra
ENSMMOG00000012538	gfm1	99	78.784	ENSMGAG00000010641	GFM1	99	78.784	Meleagris_gallopavo
ENSMMOG00000012538	gfm1	97	80.668	ENSMAUG00000000611	Gfm1	96	80.668	Mesocricetus_auratus
ENSMMOG00000012538	gfm1	97	80.417	ENSMICG00000049086	GFM1	95	80.417	Microcebus_murinus
ENSMMOG00000012538	gfm1	97	80.529	ENSMOCG00000000465	Gfm1	96	80.529	Microtus_ochrogaster
ENSMMOG00000012538	gfm1	98	79.696	ENSMODG00000015673	GFM1	97	79.696	Monodelphis_domestica
ENSMMOG00000012538	gfm1	99	85.637	ENSMALG00000012508	gfm1	99	85.637	Monopterus_albus
ENSMMOG00000012538	gfm1	97	80.335	MGP_CAROLIEiJ_G0025052	Gfm1	95	80.335	Mus_caroli
ENSMMOG00000012538	gfm1	97	80.335	ENSMUSG00000027774	Gfm1	95	80.335	Mus_musculus
ENSMMOG00000012538	gfm1	97	80.335	MGP_PahariEiJ_G0026495	Gfm1	95	80.335	Mus_pahari
ENSMMOG00000012538	gfm1	97	80.335	MGP_SPRETEiJ_G0025994	Gfm1	95	80.335	Mus_spretus
ENSMMOG00000012538	gfm1	100	78.486	ENSMPUG00000002859	GFM1	99	78.486	Mustela_putorius_furo
ENSMMOG00000012538	gfm1	99	79.380	ENSMLUG00000000452	GFM1	98	79.380	Myotis_lucifugus
ENSMMOG00000012538	gfm1	97	80.111	ENSNGAG00000012375	Gfm1	96	80.111	Nannospalax_galili
ENSMMOG00000012538	gfm1	98	91.989	ENSNBRG00000004631	gfm1	99	91.989	Neolamprologus_brichardi
ENSMMOG00000012538	gfm1	99	79.320	ENSNLEG00000004176	GFM1	98	79.320	Nomascus_leucogenys
ENSMMOG00000012538	gfm1	92	71.471	ENSMEUG00000007784	GFM1	99	71.471	Notamacropus_eugenii
ENSMMOG00000012538	gfm1	97	78.611	ENSOPRG00000009860	GFM1	97	78.611	Ochotona_princeps
ENSMMOG00000012538	gfm1	97	80.807	ENSODEG00000004316	GFM1	95	80.807	Octodon_degus
ENSMMOG00000012538	gfm1	99	90.270	ENSONIG00000003772	gfm1	99	90.270	Oreochromis_niloticus
ENSMMOG00000012538	gfm1	99	79.512	ENSOCUG00000013561	GFM1	98	79.111	Oryctolagus_cuniculus
ENSMMOG00000012538	gfm1	96	89.831	ENSORLG00000006487	gfm1	100	89.831	Oryzias_latipes
ENSMMOG00000012538	gfm1	98	89.118	ENSORLG00020003362	gfm1	97	89.118	Oryzias_latipes_hni
ENSMMOG00000012538	gfm1	98	89.118	ENSORLG00015005829	gfm1	97	89.118	Oryzias_latipes_hsok
ENSMMOG00000012538	gfm1	98	90.358	ENSOMEG00000012894	gfm1	97	90.358	Oryzias_melastigma
ENSMMOG00000012538	gfm1	99	78.167	ENSOGAG00000008298	GFM1	98	78.167	Otolemur_garnettii
ENSMMOG00000012538	gfm1	97	80.028	ENSOARG00000002409	GFM1	99	80.028	Ovis_aries
ENSMMOG00000012538	gfm1	98	79.863	ENSPPAG00000033881	GFM1	99	79.111	Pan_paniscus
ENSMMOG00000012538	gfm1	97	80.529	ENSPPRG00000009281	GFM1	98	78.841	Panthera_pardus
ENSMMOG00000012538	gfm1	97	80.389	ENSPTIG00000012416	GFM1	98	78.706	Panthera_tigris_altaica
ENSMMOG00000012538	gfm1	98	79.863	ENSPTRG00000015570	GFM1	99	79.111	Pan_troglodytes
ENSMMOG00000012538	gfm1	98	79.862	ENSPANG00000016512	GFM1	97	79.862	Papio_anubis
ENSMMOG00000012538	gfm1	98	83.747	ENSPKIG00000004876	gfm1	97	83.747	Paramormyrops_kingsleyae
ENSMMOG00000012538	gfm1	99	80.054	ENSPSIG00000012567	GFM1	99	80.054	Pelodiscus_sinensis
ENSMMOG00000012538	gfm1	98	87.569	ENSPMGG00000014068	gfm1	100	87.569	Periophthalmus_magnuspinnatus
ENSMMOG00000012538	gfm1	97	80.614	ENSPEMG00000008942	Gfm1	95	80.614	Peromyscus_maniculatus_bairdii
ENSMMOG00000012538	gfm1	86	77.273	ENSPCIG00000020195	GFM1	94	80.165	Phascolarctos_cinereus
ENSMMOG00000012538	gfm1	98	90.909	ENSPFOG00000011022	gfm1	97	90.909	Poecilia_formosa
ENSMMOG00000012538	gfm1	98	90.659	ENSPLAG00000019585	gfm1	97	90.659	Poecilia_latipinna
ENSMMOG00000012538	gfm1	98	90.771	ENSPMEG00000012376	gfm1	97	90.771	Poecilia_mexicana
ENSMMOG00000012538	gfm1	98	90.358	ENSPREG00000001332	gfm1	92	90.358	Poecilia_reticulata
ENSMMOG00000012538	gfm1	98	79.452	ENSPPYG00000014244	GFM1	99	78.706	Pongo_abelii
ENSMMOG00000012538	gfm1	95	79.090	ENSPCAG00000008934	GFM1	100	79.090	Procavia_capensis
ENSMMOG00000012538	gfm1	97	80.278	ENSPCOG00000022259	GFM1	95	80.278	Propithecus_coquereli
ENSMMOG00000012538	gfm1	97	79.555	ENSPVAG00000013605	GFM1	95	79.555	Pteropus_vampyrus
ENSMMOG00000012538	gfm1	98	91.298	ENSPNYG00000006037	gfm1	98	91.298	Pundamilia_nyererei
ENSMMOG00000012538	gfm1	98	85.931	ENSPNAG00000001237	gfm1	98	85.931	Pygocentrus_nattereri
ENSMMOG00000012538	gfm1	97	80.195	ENSRNOG00000012873	Gfm1	95	80.195	Rattus_norvegicus
ENSMMOG00000012538	gfm1	98	79.862	ENSRBIG00000031363	GFM1	97	79.862	Rhinopithecus_bieti
ENSMMOG00000012538	gfm1	98	80.000	ENSRROG00000031081	GFM1	97	80.000	Rhinopithecus_roxellana
ENSMMOG00000012538	gfm1	93	57.225	YLR069C	-	90	57.225	Saccharomyces_cerevisiae
ENSMMOG00000012538	gfm1	98	79.452	ENSSBOG00000023252	GFM1	97	79.452	Saimiri_boliviensis_boliviensis
ENSMMOG00000012538	gfm1	98	80.775	ENSSHAG00000017772	GFM1	97	80.663	Sarcophilus_harrisii
ENSMMOG00000012538	gfm1	98	84.232	ENSSFOG00015003117	gfm1	99	83.956	Scleropages_formosus
ENSMMOG00000012538	gfm1	98	90.694	ENSSMAG00000013221	gfm1	97	90.694	Scophthalmus_maximus
ENSMMOG00000012538	gfm1	98	91.598	ENSSDUG00000018665	gfm1	97	91.598	Seriola_dumerili
ENSMMOG00000012538	gfm1	98	91.460	ENSSLDG00000020606	gfm1	97	91.460	Seriola_lalandi_dorsalis
ENSMMOG00000012538	gfm1	98	77.901	ENSSPUG00000018686	GFM1	98	77.901	Sphenodon_punctatus
ENSMMOG00000012538	gfm1	98	90.634	ENSSPAG00000008800	gfm1	97	90.634	Stegastes_partitus
ENSMMOG00000012538	gfm1	97	79.526	ENSSSCG00000025651	GFM1	95	79.526	Sus_scrofa
ENSMMOG00000012538	gfm1	98	90.470	ENSTRUG00000009244	gfm1	97	90.470	Takifugu_rubripes
ENSMMOG00000012538	gfm1	98	92.011	ENSTNIG00000007729	gfm1	97	92.011	Tetraodon_nigroviridis
ENSMMOG00000012538	gfm1	91	71.704	ENSTBEG00000017404	GFM1	89	71.704	Tupaia_belangeri
ENSMMOG00000012538	gfm1	97	80.084	ENSTTRG00000001735	GFM1	95	80.084	Tursiops_truncatus
ENSMMOG00000012538	gfm1	97	80.529	ENSUAMG00000026381	GFM1	98	78.841	Ursus_americanus
ENSMMOG00000012538	gfm1	97	80.250	ENSUMAG00000011268	GFM1	98	78.571	Ursus_maritimus
ENSMMOG00000012538	gfm1	99	75.439	ENSVPAG00000009444	GFM1	99	74.468	Vicugna_pacos
ENSMMOG00000012538	gfm1	97	80.501	ENSVVUG00000020091	GFM1	100	80.178	Vulpes_vulpes
ENSMMOG00000012538	gfm1	97	82.730	ENSXETG00000032551	GFM1	95	82.730	Xenopus_tropicalis
ENSMMOG00000012538	gfm1	50	90.400	ENSXCOG00000012590	gfm1	86	90.400	Xiphophorus_couchianus
ENSMMOG00000012538	gfm1	98	90.771	ENSXMAG00000000261	gfm1	97	90.771	Xiphophorus_maculatus