EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000012699 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 43119 bases
Position: chrKV751366.1:6738837-6781955
Accession: ZDB-GENE-121031-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000016674	ResIII	PF04851.15	1.7e-05	1	1
ENSMMOP00000016673	ResIII	PF04851.15	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000016949	-	5466	-	ENSMMOP00000016673	1821 (aa)	-	-
ENSMMOT00000016950	-	5406	-	ENSMMOP00000016674	1801 (aa)	-	-
ENSMMOT00000016946	-	5190	-	ENSMMOP00000016670	1729 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000012699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000012699's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000012699	chd3	84	66.751	ENSMMOG00000013429	-	93	67.126
ENSMMOG00000012699	chd3	95	66.402	ENSMMOG00000015971	-	95	66.895
ENSMMOG00000012699	chd3	98	65.732	ENSMMOG00000000073	chd4a	98	65.842

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000012699	chd3	99	74.041	ENSG00000170004	CHD3	94	74.599	Homo_sapiens
ENSMMOG00000012699	chd3	90	86.005	ENSAPOG00000005614	chd3	97	86.663	Acanthochromis_polyacanthus
ENSMMOG00000012699	chd3	71	77.769	ENSAMEG00000003025	-	97	77.242	Ailuropoda_melanoleuca
ENSMMOG00000012699	chd3	85	97.297	ENSACIG00000019671	chd3	99	97.753	Amphilophus_citrinellus
ENSMMOG00000012699	chd3	99	90.426	ENSAOCG00000023784	chd3	96	97.191	Amphiprion_ocellaris
ENSMMOG00000012699	chd3	98	86.192	ENSAPEG00000006341	chd3	93	85.522	Amphiprion_percula
ENSMMOG00000012699	chd3	98	85.654	ENSATEG00000000848	chd3	94	95.954	Anabas_testudineus
ENSMMOG00000012699	chd3	99	73.684	ENSACAG00000004276	CHD3	92	74.341	Anolis_carolinensis
ENSMMOG00000012699	chd3	97	75.095	ENSANAG00000034323	CHD3	97	75.204	Aotus_nancymaae
ENSMMOG00000012699	chd3	99	84.119	ENSACLG00000009222	chd3	98	86.703	Astatotilapia_calliptera
ENSMMOG00000012699	chd3	99	73.526	ENSBTAG00000014377	CHD3	95	74.194	Bos_taurus
ENSMMOG00000012699	chd3	99	74.041	ENSCJAG00000014766	CHD3	94	74.599	Callithrix_jacchus
ENSMMOG00000012699	chd3	99	73.684	ENSCAFG00000016859	CHD3	94	74.194	Canis_familiaris
ENSMMOG00000012699	chd3	97	75.579	ENSCAFG00020007422	CHD3	98	75.305	Canis_lupus_dingo
ENSMMOG00000012699	chd3	99	73.579	ENSCHIG00000016737	CHD3	95	74.035	Capra_hircus
ENSMMOG00000012699	chd3	99	74.082	ENSTSYG00000035658	CHD3	98	73.763	Carlito_syrichta
ENSMMOG00000012699	chd3	99	71.436	ENSCAPG00000014864	CHD3	94	72.095	Cavia_aperea
ENSMMOG00000012699	chd3	99	73.316	ENSCPOG00000022653	CHD3	94	73.840	Cavia_porcellus
ENSMMOG00000012699	chd3	99	74.094	ENSCCAG00000034792	CHD3	94	74.180	Cebus_capucinus
ENSMMOG00000012699	chd3	99	74.015	ENSCATG00000041717	CHD3	94	74.479	Cercocebus_atys
ENSMMOG00000012699	chd3	99	74.307	ENSCLAG00000010523	CHD3	96	74.613	Chinchilla_lanigera
ENSMMOG00000012699	chd3	99	73.815	ENSCSAG00000011122	CHD3	96	74.284	Chlorocebus_sabaeus
ENSMMOG00000012699	chd3	86	93.151	ENSCPBG00000011966	CHD3	94	82.484	Chrysemys_picta_bellii
ENSMMOG00000012699	chd3	99	74.029	ENSCANG00000037641	CHD3	98	72.817	Colobus_angolensis_palliatus
ENSMMOG00000012699	chd3	99	73.952	ENSCGRG00001011306	Chd3	96	74.520	Cricetulus_griseus_chok1gshd
ENSMMOG00000012699	chd3	95	71.043	ENSCGRG00000007878	Chd3	95	66.992	Cricetulus_griseus_crigri
ENSMMOG00000012699	chd3	95	90.941	ENSCSEG00000004489	chd3	98	90.941	Cynoglossus_semilaevis
ENSMMOG00000012699	chd3	91	94.937	ENSCVAG00000007293	chd3	96	88.635	Cyprinodon_variegatus
ENSMMOG00000012699	chd3	99	81.091	ENSDARG00000021405	chd3	98	81.690	Danio_rerio
ENSMMOG00000012699	chd3	90	75.000	ENSDNOG00000047846	CHD3	87	74.733	Dasypus_novemcinctus
ENSMMOG00000012699	chd3	99	74.135	ENSDORG00000010713	Chd3	96	74.799	Dipodomys_ordii
ENSMMOG00000012699	chd3	99	69.243	ENSETEG00000017733	CHD3	95	70.892	Echinops_telfairi
ENSMMOG00000012699	chd3	72	76.172	ENSEBUG00000008310	chd3	96	70.107	Eptatretus_burgeri
ENSMMOG00000012699	chd3	95	74.917	ENSEASG00005019360	CHD3	98	75.194	Equus_asinus_asinus
ENSMMOG00000012699	chd3	95	74.972	ENSECAG00000010051	CHD3	98	75.250	Equus_caballus
ENSMMOG00000012699	chd3	87	91.753	ENSEEUG00000015205	CHD3	85	68.716	Erinaceus_europaeus
ENSMMOG00000012699	chd3	83	97.279	ENSELUG00000019499	chd3	99	97.279	Esox_lucius
ENSMMOG00000012699	chd3	99	73.737	ENSFCAG00000009629	CHD3	91	74.194	Felis_catus
ENSMMOG00000012699	chd3	97	74.728	ENSFDAG00000008220	CHD3	92	75.054	Fukomys_damarensis
ENSMMOG00000012699	chd3	89	90.830	ENSGMOG00000013599	chd3	88	90.830	Gadus_morhua
ENSMMOG00000012699	chd3	62	85.925	ENSGAFG00000004055	chd3	99	86.987	Gambusia_affinis
ENSMMOG00000012699	chd3	97	86.190	ENSGACG00000019275	chd3	97	81.432	Gasterosteus_aculeatus
ENSMMOG00000012699	chd3	73	88.889	ENSGAGG00000013164	CHD3	95	84.483	Gopherus_agassizii
ENSMMOG00000012699	chd3	99	73.987	ENSGGOG00000013496	CHD3	98	72.762	Gorilla_gorilla
ENSMMOG00000012699	chd3	99	74.066	ENSHGLG00000012017	CHD3	95	74.035	Heterocephalus_glaber_female
ENSMMOG00000012699	chd3	88	68.211	ENSHGLG00100013902	CHD3	95	67.405	Heterocephalus_glaber_male
ENSMMOG00000012699	chd3	99	82.068	ENSHCOG00000010170	chd3	94	82.595	Hippocampus_comes
ENSMMOG00000012699	chd3	84	94.268	ENSIPUG00000003271	chd3	95	83.427	Ictalurus_punctatus
ENSMMOG00000012699	chd3	99	74.334	ENSSTOG00000025907	CHD3	96	74.879	Ictidomys_tridecemlineatus
ENSMMOG00000012699	chd3	99	74.401	ENSJJAG00000017633	Chd3	96	74.652	Jaculus_jaculus
ENSMMOG00000012699	chd3	92	98.039	ENSKMAG00000019292	chd3	98	85.427	Kryptolebias_marmoratus
ENSMMOG00000012699	chd3	98	83.635	ENSLBEG00000028485	chd3	89	96.581	Labrus_bergylta
ENSMMOG00000012699	chd3	93	80.357	ENSLACG00000008031	CHD3	96	70.665	Latimeria_chalumnae
ENSMMOG00000012699	chd3	99	76.704	ENSLOCG00000013965	chd3	93	76.895	Lepisosteus_oculatus
ENSMMOG00000012699	chd3	99	72.842	ENSLAFG00000000572	CHD3	97	73.344	Loxodonta_africana
ENSMMOG00000012699	chd3	99	74.015	ENSMFAG00000020113	CHD3	98	73.749	Macaca_fascicularis
ENSMMOG00000012699	chd3	94	86.923	ENSMMUG00000022221	CHD3	86	87.597	Macaca_mulatta
ENSMMOG00000012699	chd3	99	74.029	ENSMNEG00000001728	CHD3	98	74.653	Macaca_nemestrina
ENSMMOG00000012699	chd3	99	74.015	ENSMLEG00000032249	CHD3	94	74.479	Mandrillus_leucophaeus
ENSMMOG00000012699	chd3	89	86.574	ENSMAMG00000000564	chd3	99	86.405	Mastacembelus_armatus
ENSMMOG00000012699	chd3	99	73.846	ENSMAUG00000013873	Chd3	98	73.430	Mesocricetus_auratus
ENSMMOG00000012699	chd3	99	73.579	ENSMICG00000008741	CHD3	94	71.835	Microcebus_murinus
ENSMMOG00000012699	chd3	99	73.899	ENSMOCG00000004848	Chd3	96	74.427	Microtus_ochrogaster
ENSMMOG00000012699	chd3	95	75.751	ENSMODG00000007509	CHD3	98	76.131	Monodelphis_domestica
ENSMMOG00000012699	chd3	99	73.962	MGP_CAROLIEiJ_G0016564	Chd3	98	74.585	Mus_caroli
ENSMMOG00000012699	chd3	99	73.816	ENSMUSG00000018474	Chd3	98	74.399	Mus_musculus
ENSMMOG00000012699	chd3	99	73.802	MGP_PahariEiJ_G0017695	Chd3	98	74.385	Mus_pahari
ENSMMOG00000012699	chd3	99	73.816	MGP_SPRETEiJ_G0017400	Chd3	98	74.399	Mus_spretus
ENSMMOG00000012699	chd3	89	76.310	ENSMPUG00000008861	CHD3	98	76.310	Mustela_putorius_furo
ENSMMOG00000012699	chd3	99	73.831	ENSMLUG00000014643	-	94	73.929	Myotis_lucifugus
ENSMMOG00000012699	chd3	99	73.593	ENSNGAG00000000773	Chd3	94	74.035	Nannospalax_galili
ENSMMOG00000012699	chd3	91	84.749	ENSNBRG00000000636	chd3	98	86.252	Neolamprologus_brichardi
ENSMMOG00000012699	chd3	99	72.451	ENSNLEG00000009770	CHD3	98	72.331	Nomascus_leucogenys
ENSMMOG00000012699	chd3	83	88.106	ENSMEUG00000005852	CHD3	82	86.873	Notamacropus_eugenii
ENSMMOG00000012699	chd3	97	74.253	ENSOPRG00000011069	CHD3	98	74.171	Ochotona_princeps
ENSMMOG00000012699	chd3	99	73.579	ENSODEG00000017785	CHD3	95	74.088	Octodon_degus
ENSMMOG00000012699	chd3	99	86.098	ENSONIG00000009292	chd3	98	86.800	Oreochromis_niloticus
ENSMMOG00000012699	chd3	99	70.653	ENSOCUG00000029299	CHD3	96	71.021	Oryctolagus_cuniculus
ENSMMOG00000012699	chd3	87	82.658	ENSORLG00000007107	chd3	93	83.531	Oryzias_latipes
ENSMMOG00000012699	chd3	56	90.698	ENSORLG00020008387	chd3	94	85.036	Oryzias_latipes_hni
ENSMMOG00000012699	chd3	91	84.749	ENSOMEG00000013691	chd3	99	86.880	Oryzias_melastigma
ENSMMOG00000012699	chd3	99	73.474	ENSOGAG00000003216	CHD3	96	74.088	Otolemur_garnettii
ENSMMOG00000012699	chd3	99	74.118	ENSOARG00000017855	CHD3	94	74.303	Ovis_aries
ENSMMOG00000012699	chd3	99	72.283	ENSPPAG00000032886	CHD3	98	72.414	Pan_paniscus
ENSMMOG00000012699	chd3	99	74.386	ENSPPRG00000000626	CHD3	94	74.613	Panthera_pardus
ENSMMOG00000012699	chd3	99	74.041	ENSPTRG00000008714	CHD3	98	72.872	Pan_troglodytes
ENSMMOG00000012699	chd3	99	73.659	ENSPANG00000023938	CHD3	98	73.749	Papio_anubis
ENSMMOG00000012699	chd3	96	83.685	ENSPKIG00000006305	chd3	89	92.364	Paramormyrops_kingsleyae
ENSMMOG00000012699	chd3	58	79.635	ENSPSIG00000010177	CHD3	97	79.945	Pelodiscus_sinensis
ENSMMOG00000012699	chd3	99	73.424	ENSPEMG00000014262	Chd3	95	74.049	Peromyscus_maniculatus_bairdii
ENSMMOG00000012699	chd3	90	87.336	ENSPCIG00000005442	CHD3	95	82.857	Phascolarctos_cinereus
ENSMMOG00000012699	chd3	98	84.628	ENSPFOG00000012464	chd3	90	83.170	Poecilia_formosa
ENSMMOG00000012699	chd3	93	95.122	ENSPLAG00000002887	chd3	93	96.537	Poecilia_latipinna
ENSMMOG00000012699	chd3	60	81.044	ENSPMEG00000016725	chd3	91	84.771	Poecilia_mexicana
ENSMMOG00000012699	chd3	94	96.751	ENSPREG00000011044	chd3	96	87.023	Poecilia_reticulata
ENSMMOG00000012699	chd3	99	71.301	ENSPPYG00000007940	CHD3	96	71.489	Pongo_abelii
ENSMMOG00000012699	chd3	96	78.900	ENSPCAG00000004350	CHD3	92	78.625	Procavia_capensis
ENSMMOG00000012699	chd3	99	74.173	ENSPCOG00000020952	CHD3	94	74.049	Propithecus_coquereli
ENSMMOG00000012699	chd3	83	72.906	ENSPVAG00000016344	CHD3	80	73.113	Pteropus_vampyrus
ENSMMOG00000012699	chd3	95	92.364	ENSPNAG00000020393	chd3	98	92.058	Pygocentrus_nattereri
ENSMMOG00000012699	chd3	95	74.626	ENSRNOG00000009722	Chd3	98	74.903	Rattus_norvegicus
ENSMMOG00000012699	chd3	99	72.097	ENSRBIG00000033562	CHD3	98	73.012	Rhinopithecus_bieti
ENSMMOG00000012699	chd3	99	74.015	ENSRROG00000029554	CHD3	98	73.497	Rhinopithecus_roxellana
ENSMMOG00000012699	chd3	99	74.094	ENSSBOG00000020719	CHD3	98	74.764	Saimiri_boliviensis_boliviensis
ENSMMOG00000012699	chd3	99	74.332	ENSSHAG00000014412	CHD3	96	74.650	Sarcophilus_harrisii
ENSMMOG00000012699	chd3	91	83.056	ENSSFOG00015023123	chd3	95	83.577	Scleropages_formosus
ENSMMOG00000012699	chd3	94	84.678	ENSSMAG00000006451	chd3	99	87.387	Scophthalmus_maximus
ENSMMOG00000012699	chd3	57	87.723	ENSSDUG00000005792	chd3	96	87.723	Seriola_dumerili
ENSMMOG00000012699	chd3	98	86.486	ENSSPAG00000013694	chd3	98	91.393	Stegastes_partitus
ENSMMOG00000012699	chd3	99	73.484	ENSSSCG00000021363	CHD3	99	75.015	Sus_scrofa
ENSMMOG00000012699	chd3	85	87.636	ENSTRUG00000014990	chd3	94	87.372	Takifugu_rubripes
ENSMMOG00000012699	chd3	99	85.891	ENSTNIG00000012998	chd3	96	85.861	Tetraodon_nigroviridis
ENSMMOG00000012699	chd3	62	91.753	ENSTBEG00000011454	-	70	91.753	Tupaia_belangeri
ENSMMOG00000012699	chd3	98	77.720	ENSTTRG00000010295	CHD3	92	77.655	Tursiops_truncatus
ENSMMOG00000012699	chd3	90	88.991	ENSUAMG00000005475	CHD3	94	88.991	Ursus_americanus
ENSMMOG00000012699	chd3	53	91.304	ENSVPAG00000010794	-	58	96.078	Vicugna_pacos
ENSMMOG00000012699	chd3	98	74.078	ENSVVUG00000028011	CHD3	96	75.217	Vulpes_vulpes
ENSMMOG00000012699	chd3	99	68.100	ENSXETG00000012991	chd3	90	69.584	Xenopus_tropicalis
ENSMMOG00000012699	chd3	57	90.519	ENSXCOG00000000809	chd3	93	90.653	Xiphophorus_couchianus
ENSMMOG00000012699	chd3	84	95.109	ENSXMAG00000016035	chd3	99	95.109	Xiphophorus_maculatus