EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000013495 (Gene tree)
Gene ID: -
Gene Symbol: rbm12
Alias: zgc:193560|zgc:193570
Full Name: RNA binding motif protein 12
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 2694 bases
Position: chrKV751353.1:5623876-5626569
Accession: ZDB-GENE-081022-16
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000017778	RRM_1	PF00076.22	2.3e-32	1	4
ENSMMOP00000017778	RRM_1	PF00076.22	2.3e-32	2	4
ENSMMOP00000017778	RRM_1	PF00076.22	2.3e-32	3	4
ENSMMOP00000017778	RRM_1	PF00076.22	2.3e-32	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000018069	-	2619	-	ENSMMOP00000017778	872 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000013495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000013495's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000013495	rbm12	80	67.442	ENSMMOG00000002404	rbm12b	82	67.442

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000013495	rbm12	100	85.255	ENSACIG00000011053	rbm12	100	85.033	Amphilophus_citrinellus
ENSMMOG00000013495	rbm12	100	86.504	ENSAOCG00000019579	rbm12	100	87.043	Amphiprion_ocellaris
ENSMMOG00000013495	rbm12	73	72.289	ENSCCAG00000035899	-	84	72.289	Cebus_capucinus
ENSMMOG00000013495	rbm12	100	61.160	ENSDARG00000100636	rbm12	100	60.616	Danio_rerio
ENSMMOG00000013495	rbm12	74	71.429	ENSDORG00000000606	-	87	49.249	Dipodomys_ordii
ENSMMOG00000013495	rbm12	56	76.636	ENSEBUG00000016806	rbm12	79	84.043	Eptatretus_burgeri
ENSMMOG00000013495	rbm12	85	46.042	ENSFALG00000012516	RBM12	82	45.563	Ficedula_albicollis
ENSMMOG00000013495	rbm12	100	82.483	ENSGACG00000004202	rbm12	98	82.151	Gasterosteus_aculeatus
ENSMMOG00000013495	rbm12	100	60.065	ENSIPUG00000014491	rbm12	100	59.027	Ictalurus_punctatus
ENSMMOG00000013495	rbm12	81	67.073	ENSJJAG00000009879	-	92	44.928	Jaculus_jaculus
ENSMMOG00000013495	rbm12	71	55.335	ENSLOCG00000018363	rbm12	100	58.002	Lepisosteus_oculatus
ENSMMOG00000013495	rbm12	67	86.232	ENSMAMG00000001497	rbm12	94	86.232	Mastacembelus_armatus
ENSMMOG00000013495	rbm12	60	94.521	ENSMALG00000022679	rbm12	100	94.521	Monopterus_albus
ENSMMOG00000013495	rbm12	100	77.594	ENSOMEG00000008238	rbm12	100	77.704	Oryzias_melastigma
ENSMMOG00000013495	rbm12	90	75.122	ENSPFOG00000023551	rbm12	97	81.215	Poecilia_formosa
ENSMMOG00000013495	rbm12	100	45.806	ENSXETG00000033541	RBM12	100	46.121	Xenopus_tropicalis
ENSMMOG00000013495	rbm12	99	78.540	ENSXCOG00000014073	rbm12	99	79.204	Xiphophorus_couchianus