EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000013970 (Gene tree)
Gene ID: -
Gene Symbol: srl
Alias: im:6899248|wu:fb94b10|zgc:153844
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 4220 bases
Position: chrKV751340.1:2889208-2893427
Accession: ZDB-GENE-061110-91
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000018452	MMR_HSR1	PF01926.23	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000018752	-	1353	-	ENSMMOP00000018452	450 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000013970's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000013970's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000013970	srl	86	31.701	ENSMMOG00000003005	ehd1a	70	31.701
ENSMMOG00000013970	srl	98	74.725	ENSMMOG00000021572	SRL	99	74.725
ENSMMOG00000013970	srl	56	38.189	ENSMMOG00000009001	-	73	32.071
ENSMMOG00000013970	srl	62	31.183	ENSMMOG00000015157	ehd3	56	31.183
ENSMMOG00000013970	srl	91	32.692	ENSMMOG00000001900	bicra	74	32.692
ENSMMOG00000013970	srl	89	31.514	ENSMMOG00000013306	ehd4	71	31.514

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000013970	srl	98	82.579	ENSG00000185739	SRL	99	82.791	Homo_sapiens
ENSMMOG00000013970	srl	98	77.149	ENSAPOG00000012432	SRL	98	77.149	Acanthochromis_polyacanthus
ENSMMOG00000013970	srl	100	96.667	ENSAPOG00000018093	srl	99	96.825	Acanthochromis_polyacanthus
ENSMMOG00000013970	srl	98	83.032	ENSAMEG00000010862	SRL	50	83.032	Ailuropoda_melanoleuca
ENSMMOG00000013970	srl	99	75.336	ENSACIG00000015419	SRL	99	75.336	Amphilophus_citrinellus
ENSMMOG00000013970	srl	100	96.889	ENSACIG00000015799	srl	99	96.889	Amphilophus_citrinellus
ENSMMOG00000013970	srl	98	77.427	ENSAOCG00000017049	SRL	96	77.652	Amphiprion_ocellaris
ENSMMOG00000013970	srl	96	97.235	ENSAOCG00000007574	srl	100	97.235	Amphiprion_ocellaris
ENSMMOG00000013970	srl	98	73.982	ENSAPEG00000006533	SRL	96	74.492	Amphiprion_percula
ENSMMOG00000013970	srl	100	96.889	ENSAPEG00000006911	srl	96	96.889	Amphiprion_percula
ENSMMOG00000013970	srl	98	76.484	ENSATEG00000009643	SRL	52	76.703	Anabas_testudineus
ENSMMOG00000013970	srl	100	96.444	ENSATEG00000024315	srl	96	96.444	Anabas_testudineus
ENSMMOG00000013970	srl	98	81.898	ENSACAG00000016380	SRL	85	80.952	Anolis_carolinensis
ENSMMOG00000013970	srl	100	96.000	ENSACLG00000027685	srl	98	95.768	Astatotilapia_calliptera
ENSMMOG00000013970	srl	100	73.434	ENSACLG00000024674	SRL	58	73.434	Astatotilapia_calliptera
ENSMMOG00000013970	srl	100	91.778	ENSAMXG00000018789	srl	88	91.778	Astyanax_mexicanus
ENSMMOG00000013970	srl	93	77.619	ENSAMXG00000038693	SRL	100	73.731	Astyanax_mexicanus
ENSMMOG00000013970	srl	98	83.220	ENSBTAG00000001078	SRL	56	83.220	Bos_taurus
ENSMMOG00000013970	srl	98	82.579	ENSCJAG00000019750	SRL	93	82.579	Callithrix_jacchus
ENSMMOG00000013970	srl	100	81.858	ENSCAFG00000019233	SRL	84	81.858	Canis_familiaris
ENSMMOG00000013970	srl	100	81.858	ENSCAFG00020025024	SRL	56	81.858	Canis_lupus_dingo
ENSMMOG00000013970	srl	98	83.220	ENSCHIG00000017927	SRL	55	83.220	Capra_hircus
ENSMMOG00000013970	srl	98	83.258	ENSTSYG00000007919	SRL	99	83.721	Carlito_syrichta
ENSMMOG00000013970	srl	98	83.032	ENSCPOG00000012643	SRL	94	83.032	Cavia_porcellus
ENSMMOG00000013970	srl	98	77.149	ENSCCAG00000032646	SRL	100	83.905	Cebus_capucinus
ENSMMOG00000013970	srl	98	82.579	ENSCATG00000032227	-	93	82.579	Cercocebus_atys
ENSMMOG00000013970	srl	98	83.710	ENSCLAG00000016242	SRL	94	83.710	Chinchilla_lanigera
ENSMMOG00000013970	srl	86	85.714	ENSCHOG00000001618	SRL	52	85.714	Choloepus_hoffmanni
ENSMMOG00000013970	srl	99	86.010	ENSCPBG00000026371	SRL	95	80.652	Chrysemys_picta_bellii
ENSMMOG00000013970	srl	92	60.911	ENSCING00000005231	-	93	60.911	Ciona_intestinalis
ENSMMOG00000013970	srl	98	82.579	ENSCANG00000035872	SRL	99	82.791	Colobus_angolensis_palliatus
ENSMMOG00000013970	srl	98	83.937	ENSCGRG00001016630	Srl	94	83.937	Cricetulus_griseus_chok1gshd
ENSMMOG00000013970	srl	98	83.937	ENSCGRG00000005458	Srl	94	83.937	Cricetulus_griseus_crigri
ENSMMOG00000013970	srl	100	95.556	ENSCSEG00000016151	srl	96	95.556	Cynoglossus_semilaevis
ENSMMOG00000013970	srl	98	75.676	ENSCSEG00000011866	SRL	89	75.901	Cynoglossus_semilaevis
ENSMMOG00000013970	srl	100	92.667	ENSCVAG00000003513	srl	97	92.857	Cyprinodon_variegatus
ENSMMOG00000013970	srl	100	75.652	ENSCVAG00000022465	SRL	60	76.432	Cyprinodon_variegatus
ENSMMOG00000013970	srl	99	92.342	ENSDARG00000104587	srl	94	92.342	Danio_rerio
ENSMMOG00000013970	srl	84	77.344	ENSDARG00000112959	CABZ01072309.1	100	77.344	Danio_rerio
ENSMMOG00000013970	srl	98	82.805	ENSDNOG00000011643	SRL	54	81.637	Dasypus_novemcinctus
ENSMMOG00000013970	srl	98	83.710	ENSDORG00000014807	Srl	94	83.710	Dipodomys_ordii
ENSMMOG00000013970	srl	82	64.973	ENSEBUG00000015937	srl	94	64.973	Eptatretus_burgeri
ENSMMOG00000013970	srl	98	83.673	ENSEASG00005000942	SRL	53	83.673	Equus_asinus_asinus
ENSMMOG00000013970	srl	98	83.673	ENSECAG00000024219	SRL	93	83.673	Equus_caballus
ENSMMOG00000013970	srl	100	85.653	ENSELUG00000015616	srl	96	85.653	Esox_lucius
ENSMMOG00000013970	srl	98	82.805	ENSFCAG00000022075	SRL	93	82.805	Felis_catus
ENSMMOG00000013970	srl	99	82.143	ENSFALG00000004328	SRL	64	82.143	Ficedula_albicollis
ENSMMOG00000013970	srl	98	83.937	ENSFDAG00000006199	SRL	94	83.937	Fukomys_damarensis
ENSMMOG00000013970	srl	99	75.670	ENSFHEG00000011854	SRL	99	75.893	Fundulus_heteroclitus
ENSMMOG00000013970	srl	100	94.000	ENSFHEG00000011239	srl	97	94.196	Fundulus_heteroclitus
ENSMMOG00000013970	srl	98	89.404	ENSGMOG00000014954	srl	99	89.404	Gadus_morhua
ENSMMOG00000013970	srl	99	82.366	ENSGALG00000038884	SRL	95	82.366	Gallus_gallus
ENSMMOG00000013970	srl	100	93.778	ENSGAFG00000000010	srl	98	93.778	Gambusia_affinis
ENSMMOG00000013970	srl	99	77.928	ENSGAFG00000016984	SRL	99	77.928	Gambusia_affinis
ENSMMOG00000013970	srl	98	94.286	ENSGACG00000011332	srl	100	94.286	Gasterosteus_aculeatus
ENSMMOG00000013970	srl	98	82.579	ENSGGOG00000011312	-	93	82.579	Gorilla_gorilla
ENSMMOG00000013970	srl	100	96.000	ENSHBUG00000007581	srl	98	95.768	Haplochromis_burtoni
ENSMMOG00000013970	srl	100	73.866	ENSHBUG00000015710	SRL	58	73.866	Haplochromis_burtoni
ENSMMOG00000013970	srl	98	83.710	ENSHGLG00000015271	SRL	94	83.710	Heterocephalus_glaber_female
ENSMMOG00000013970	srl	98	83.710	ENSHGLG00100019378	SRL	94	83.710	Heterocephalus_glaber_male
ENSMMOG00000013970	srl	100	95.333	ENSHCOG00000008687	srl	99	95.312	Hippocampus_comes
ENSMMOG00000013970	srl	98	74.449	ENSHCOG00000001012	SRL	50	74.449	Hippocampus_comes
ENSMMOG00000013970	srl	100	90.667	ENSIPUG00000012513	srl	96	90.667	Ictalurus_punctatus
ENSMMOG00000013970	srl	97	69.725	ENSIPUG00000011609	SRL	95	69.725	Ictalurus_punctatus
ENSMMOG00000013970	srl	98	83.484	ENSSTOG00000021151	-	94	83.484	Ictidomys_tridecemlineatus
ENSMMOG00000013970	srl	98	84.163	ENSJJAG00000016400	Srl	94	84.163	Jaculus_jaculus
ENSMMOG00000013970	srl	98	94.091	ENSKMAG00000014115	srl	93	95.249	Kryptolebias_marmoratus
ENSMMOG00000013970	srl	98	76.871	ENSKMAG00000019537	SRL	100	76.871	Kryptolebias_marmoratus
ENSMMOG00000013970	srl	100	95.778	ENSLBEG00000026643	srl	96	95.778	Labrus_bergylta
ENSMMOG00000013970	srl	98	76.018	ENSLBEG00000013811	SRL	95	76.244	Labrus_bergylta
ENSMMOG00000013970	srl	99	83.964	ENSLACG00000002825	SRL	99	83.964	Latimeria_chalumnae
ENSMMOG00000013970	srl	99	88.641	ENSLOCG00000002644	srl	96	88.641	Lepisosteus_oculatus
ENSMMOG00000013970	srl	98	82.353	ENSLAFG00000006329	SRL	50	82.353	Loxodonta_africana
ENSMMOG00000013970	srl	96	82.791	ENSMFAG00000037383	SRL	99	82.791	Macaca_fascicularis
ENSMMOG00000013970	srl	98	82.579	ENSMNEG00000019236	-	93	82.579	Macaca_nemestrina
ENSMMOG00000013970	srl	98	75.566	ENSMLEG00000032156	SRL	93	75.566	Mandrillus_leucophaeus
ENSMMOG00000013970	srl	100	96.444	ENSMAMG00000023322	srl	96	96.444	Mastacembelus_armatus
ENSMMOG00000013970	srl	98	75.771	ENSMAMG00000013756	SRL	53	75.771	Mastacembelus_armatus
ENSMMOG00000013970	srl	100	96.000	ENSMZEG00005004548	srl	98	95.768	Maylandia_zebra
ENSMMOG00000013970	srl	100	73.650	ENSMZEG00005004010	SRL	58	73.650	Maylandia_zebra
ENSMMOG00000013970	srl	99	82.366	ENSMGAG00000009342	SRL	94	84.987	Meleagris_gallopavo
ENSMMOG00000013970	srl	98	82.844	ENSMICG00000032307	SRL	94	82.844	Microcebus_murinus
ENSMMOG00000013970	srl	98	83.258	ENSMOCG00000008208	Srl	94	83.258	Microtus_ochrogaster
ENSMMOG00000013970	srl	99	83.036	ENSMODG00000016380	-	50	83.036	Monodelphis_domestica
ENSMMOG00000013970	srl	93	77.088	ENSMALG00000000670	SRL	98	77.088	Monopterus_albus
ENSMMOG00000013970	srl	100	94.667	ENSMALG00000005039	srl	99	94.643	Monopterus_albus
ENSMMOG00000013970	srl	98	84.615	MGP_CAROLIEiJ_G0020400	Srl	94	84.615	Mus_caroli
ENSMMOG00000013970	srl	98	84.615	ENSMUSG00000022519	Srl	94	84.615	Mus_musculus
ENSMMOG00000013970	srl	98	84.615	MGP_SPRETEiJ_G0021294	Srl	94	84.615	Mus_spretus
ENSMMOG00000013970	srl	98	83.032	ENSMPUG00000015025	SRL	54	83.032	Mustela_putorius_furo
ENSMMOG00000013970	srl	98	83.937	ENSMLUG00000030733	SRL	56	83.937	Myotis_lucifugus
ENSMMOG00000013970	srl	98	84.389	ENSNGAG00000019741	Srl	94	84.389	Nannospalax_galili
ENSMMOG00000013970	srl	100	95.556	ENSNBRG00000023775	srl	96	95.556	Neolamprologus_brichardi
ENSMMOG00000013970	srl	100	73.650	ENSNBRG00000002422	SRL	56	75.926	Neolamprologus_brichardi
ENSMMOG00000013970	srl	98	76.923	ENSNLEG00000029051	SRL	93	76.923	Nomascus_leucogenys
ENSMMOG00000013970	srl	98	77.149	ENSOPRG00000000477	-	52	77.149	Ochotona_princeps
ENSMMOG00000013970	srl	98	83.710	ENSODEG00000013256	SRL	94	83.710	Octodon_degus
ENSMMOG00000013970	srl	100	96.000	ENSONIG00000005192	srl	96	96.000	Oreochromis_niloticus
ENSMMOG00000013970	srl	99	74.554	ENSORLG00000015064	SRL	98	74.554	Oryzias_latipes
ENSMMOG00000013970	srl	100	94.889	ENSORLG00000008291	srl	93	94.889	Oryzias_latipes
ENSMMOG00000013970	srl	99	74.777	ENSORLG00020018173	SRL	98	74.777	Oryzias_latipes_hni
ENSMMOG00000013970	srl	100	95.333	ENSORLG00020019784	srl	82	95.333	Oryzias_latipes_hni
ENSMMOG00000013970	srl	99	74.777	ENSORLG00015019063	SRL	98	74.777	Oryzias_latipes_hsok
ENSMMOG00000013970	srl	100	94.889	ENSORLG00015009342	srl	93	94.889	Oryzias_latipes_hsok
ENSMMOG00000013970	srl	100	94.667	ENSOMEG00000010006	srl	98	95.227	Oryzias_melastigma
ENSMMOG00000013970	srl	99	73.742	ENSOMEG00000005682	SRL	53	74.179	Oryzias_melastigma
ENSMMOG00000013970	srl	99	82.658	ENSOGAG00000029266	SRL	54	82.658	Otolemur_garnettii
ENSMMOG00000013970	srl	98	83.220	ENSOARG00000003074	SRL	55	83.220	Ovis_aries
ENSMMOG00000013970	srl	98	82.579	ENSPPAG00000024919	-	99	82.791	Pan_paniscus
ENSMMOG00000013970	srl	98	82.805	ENSPPRG00000010274	SRL	99	83.256	Panthera_pardus
ENSMMOG00000013970	srl	98	82.805	ENSPTIG00000015162	SRL	99	83.256	Panthera_tigris_altaica
ENSMMOG00000013970	srl	98	82.579	ENSPTRG00000007712	SRL	99	82.791	Pan_troglodytes
ENSMMOG00000013970	srl	98	82.579	ENSPANG00000013804	SRL	95	82.579	Papio_anubis
ENSMMOG00000013970	srl	100	91.391	ENSPKIG00000006405	srl	96	91.391	Paramormyrops_kingsleyae
ENSMMOG00000013970	srl	99	78.924	ENSPKIG00000024974	SRL	89	78.924	Paramormyrops_kingsleyae
ENSMMOG00000013970	srl	99	93.764	ENSPMGG00000021081	srl	97	93.764	Periophthalmus_magnuspinnatus
ENSMMOG00000013970	srl	98	75.621	ENSPMGG00000023505	-	100	75.621	Periophthalmus_magnuspinnatus
ENSMMOG00000013970	srl	98	83.484	ENSPEMG00000015842	Srl	94	83.484	Peromyscus_maniculatus_bairdii
ENSMMOG00000013970	srl	93	67.890	ENSPMAG00000004786	srl	99	67.890	Petromyzon_marinus
ENSMMOG00000013970	srl	99	82.812	ENSPCIG00000012128	SRL	98	82.812	Phascolarctos_cinereus
ENSMMOG00000013970	srl	100	91.558	ENSPFOG00000011408	srl	95	91.540	Poecilia_formosa
ENSMMOG00000013970	srl	100	94.000	ENSPLAG00000008017	srl	98	94.000	Poecilia_latipinna
ENSMMOG00000013970	srl	99	76.577	ENSPLAG00000002932	SRL	99	76.577	Poecilia_latipinna
ENSMMOG00000013970	srl	100	74.298	ENSPMEG00000005890	SRL	61	73.866	Poecilia_mexicana
ENSMMOG00000013970	srl	100	94.000	ENSPMEG00000006745	srl	98	94.000	Poecilia_mexicana
ENSMMOG00000013970	srl	100	93.778	ENSPREG00000007751	srl	99	93.778	Poecilia_reticulata
ENSMMOG00000013970	srl	99	76.837	ENSPREG00000000315	SRL	100	76.837	Poecilia_reticulata
ENSMMOG00000013970	srl	93	84.248	ENSPPYG00000007053	SRL	98	84.248	Pongo_abelii
ENSMMOG00000013970	srl	98	82.766	ENSPCAG00000003378	-	50	82.766	Procavia_capensis
ENSMMOG00000013970	srl	98	82.844	ENSPCOG00000023135	SRL	99	83.488	Propithecus_coquereli
ENSMMOG00000013970	srl	98	83.258	ENSPVAG00000006586	SRL	54	83.258	Pteropus_vampyrus
ENSMMOG00000013970	srl	100	96.222	ENSPNYG00000001200	srl	98	95.991	Pundamilia_nyererei
ENSMMOG00000013970	srl	100	73.650	ENSPNYG00000003423	SRL	58	73.650	Pundamilia_nyererei
ENSMMOG00000013970	srl	98	76.190	ENSPNAG00000007361	-	91	76.190	Pygocentrus_nattereri
ENSMMOG00000013970	srl	100	91.778	ENSPNAG00000023106	srl	96	91.778	Pygocentrus_nattereri
ENSMMOG00000013970	srl	98	82.579	ENSSBOG00000029273	SRL	93	82.579	Saimiri_boliviensis_boliviensis
ENSMMOG00000013970	srl	99	82.812	ENSSHAG00000011715	-	50	82.812	Sarcophilus_harrisii
ENSMMOG00000013970	srl	99	77.252	ENSSFOG00015021327	SRL	50	76.562	Scleropages_formosus
ENSMMOG00000013970	srl	99	93.034	ENSSFOG00015009773	srl	96	92.444	Scleropages_formosus
ENSMMOG00000013970	srl	99	95.749	ENSSMAG00000016274	srl	98	95.323	Scophthalmus_maximus
ENSMMOG00000013970	srl	98	74.725	ENSSMAG00000002232	SRL	50	74.725	Scophthalmus_maximus
ENSMMOG00000013970	srl	98	77.111	ENSSDUG00000009161	SRL	99	77.111	Seriola_dumerili
ENSMMOG00000013970	srl	99	95.946	ENSSDUG00000010808	srl	98	95.946	Seriola_dumerili
ENSMMOG00000013970	srl	100	95.333	ENSSLDG00000022024	srl	97	95.100	Seriola_lalandi_dorsalis
ENSMMOG00000013970	srl	98	76.856	ENSSLDG00000014601	SRL	100	77.412	Seriola_lalandi_dorsalis
ENSMMOG00000013970	srl	99	83.111	ENSSPUG00000016859	SRL	99	83.111	Sphenodon_punctatus
ENSMMOG00000013970	srl	100	96.667	ENSSPAG00000019105	srl	95	96.667	Stegastes_partitus
ENSMMOG00000013970	srl	98	78.231	ENSSPAG00000014254	SRL	98	78.231	Stegastes_partitus
ENSMMOG00000013970	srl	98	82.993	ENSSSCG00000007949	SRL	98	82.993	Sus_scrofa
ENSMMOG00000013970	srl	80	85.912	ENSTGUG00000016121	-	100	85.912	Taeniopygia_guttata
ENSMMOG00000013970	srl	99	82.366	ENSTGUG00000003951	-	98	82.366	Taeniopygia_guttata
ENSMMOG00000013970	srl	100	97.111	ENSTRUG00000006005	srl	96	97.111	Takifugu_rubripes
ENSMMOG00000013970	srl	93	77.566	ENSTRUG00000013310	SRL	55	77.566	Takifugu_rubripes
ENSMMOG00000013970	srl	100	96.889	ENSTNIG00000009739	srl	96	96.889	Tetraodon_nigroviridis
ENSMMOG00000013970	srl	98	83.032	ENSUAMG00000005701	SRL	55	83.032	Ursus_americanus
ENSMMOG00000013970	srl	98	83.032	ENSUMAG00000002574	SRL	55	83.032	Ursus_maritimus
ENSMMOG00000013970	srl	100	81.858	ENSVVUG00000016331	-	50	81.858	Vulpes_vulpes
ENSMMOG00000013970	srl	100	80.176	ENSXETG00000017313	srl	98	81.674	Xenopus_tropicalis
ENSMMOG00000013970	srl	94	94.062	ENSXCOG00000010424	srl	97	94.062	Xiphophorus_couchianus
ENSMMOG00000013970	srl	100	76.889	ENSXCOG00000014584	SRL	99	76.889	Xiphophorus_couchianus
ENSMMOG00000013970	srl	100	74.514	ENSXMAG00000027598	SRL	63	74.514	Xiphophorus_maculatus
ENSMMOG00000013970	srl	100	93.333	ENSXMAG00000004625	srl	91	93.333	Xiphophorus_maculatus