EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000014167 (Gene tree)
Gene ID: -
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein 200 (U5)
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 15408 bases
Position: chrKV751354.1:849620-865027
Accession: ZDB-GENE-081105-64
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000018705	ResIII	PF04851.15	5.6e-26	1	2
ENSMMOP00000018705	ResIII	PF04851.15	5.6e-26	2	2
ENSMMOP00000018705	DEAD	PF00270.29	5.4e-53	1	2
ENSMMOP00000018705	DEAD	PF00270.29	5.4e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000019007	-	6357	-	ENSMMOP00000018705	2118 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000014167's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000014167's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000014167	snrnp200	87	40.349	ENSMMOG00000003198	ascc3	83	42.670
ENSMMOG00000014167	snrnp200	65	30.493	ENSMMOG00000006148	hfm1	83	30.493

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000014167	snrnp200	99	88.904	ENSG00000144028	SNRNP200	99	89.009	Homo_sapiens
ENSMMOG00000014167	snrnp200	100	96.395	ENSAPOG00000010223	snrnp200	100	96.395	Acanthochromis_polyacanthus
ENSMMOG00000014167	snrnp200	99	88.951	ENSAMEG00000008996	SNRNP200	99	89.056	Ailuropoda_melanoleuca
ENSMMOG00000014167	snrnp200	97	95.016	ENSACIG00000001764	snrnp200	98	95.016	Amphilophus_citrinellus
ENSMMOG00000014167	snrnp200	100	96.208	ENSAOCG00000024593	snrnp200	100	96.208	Amphiprion_ocellaris
ENSMMOG00000014167	snrnp200	97	95.123	ENSAPEG00000012554	snrnp200	100	95.123	Amphiprion_percula
ENSMMOG00000014167	snrnp200	100	96.114	ENSATEG00000022522	snrnp200	100	96.114	Anabas_testudineus
ENSMMOG00000014167	snrnp200	99	89.015	ENSAPLG00000004313	SNRNP200	99	89.073	Anas_platyrhynchos
ENSMMOG00000014167	snrnp200	99	87.776	ENSACAG00000000434	SNRNP200	100	87.776	Anolis_carolinensis
ENSMMOG00000014167	snrnp200	99	86.175	ENSANAG00000036625	SNRNP200	99	86.270	Aotus_nancymaae
ENSMMOG00000014167	snrnp200	99	95.299	ENSACLG00000011188	snrnp200	99	95.299	Astatotilapia_calliptera
ENSMMOG00000014167	snrnp200	99	92.713	ENSAMXG00000005684	snrnp200	99	92.713	Astyanax_mexicanus
ENSMMOG00000014167	snrnp200	99	88.764	ENSBTAG00000000848	SNRNP200	99	88.868	Bos_taurus
ENSMMOG00000014167	snrnp200	99	88.858	ENSCJAG00000007514	SNRNP200	99	88.962	Callithrix_jacchus
ENSMMOG00000014167	snrnp200	99	88.194	ENSCAFG00020019979	SNRNP200	99	89.631	Canis_lupus_dingo
ENSMMOG00000014167	snrnp200	99	88.670	ENSCHIG00000020611	SNRNP200	99	88.774	Capra_hircus
ENSMMOG00000014167	snrnp200	99	88.951	ENSTSYG00000010467	SNRNP200	99	89.056	Carlito_syrichta
ENSMMOG00000014167	snrnp200	99	88.434	ENSCAPG00000017234	SNRNP200	99	88.538	Cavia_aperea
ENSMMOG00000014167	snrnp200	99	88.764	ENSCPOG00000006776	SNRNP200	99	88.868	Cavia_porcellus
ENSMMOG00000014167	snrnp200	99	88.858	ENSCCAG00000033962	SNRNP200	99	88.962	Cebus_capucinus
ENSMMOG00000014167	snrnp200	99	88.904	ENSCATG00000015790	SNRNP200	99	89.009	Cercocebus_atys
ENSMMOG00000014167	snrnp200	99	88.811	ENSCLAG00000004116	SNRNP200	99	88.915	Chinchilla_lanigera
ENSMMOG00000014167	snrnp200	99	88.904	ENSCSAG00000017369	SNRNP200	99	89.009	Chlorocebus_sabaeus
ENSMMOG00000014167	snrnp200	73	93.701	ENSCHOG00000012981	-	58	93.701	Choloepus_hoffmanni
ENSMMOG00000014167	snrnp200	99	88.733	ENSCPBG00000022571	SNRNP200	99	95.000	Chrysemys_picta_bellii
ENSMMOG00000014167	snrnp200	99	74.254	ENSCING00000005082	-	99	74.485	Ciona_intestinalis
ENSMMOG00000014167	snrnp200	99	83.559	ENSCANG00000033932	SNRNP200	99	88.611	Colobus_angolensis_palliatus
ENSMMOG00000014167	snrnp200	99	88.904	ENSCGRG00001022610	Snrnp200	99	89.009	Cricetulus_griseus_chok1gshd
ENSMMOG00000014167	snrnp200	99	88.406	ENSCGRG00000016472	Snrnp200	99	88.508	Cricetulus_griseus_crigri
ENSMMOG00000014167	snrnp200	99	94.330	ENSCSEG00000016399	snrnp200	99	94.450	Cynoglossus_semilaevis
ENSMMOG00000014167	snrnp200	100	89.466	ENSCVAG00000017631	snrnp200	100	89.466	Cyprinodon_variegatus
ENSMMOG00000014167	snrnp200	100	92.553	ENSDARG00000077536	snrnp200	99	92.568	Danio_rerio
ENSMMOG00000014167	snrnp200	99	87.734	ENSDNOG00000011227	SNRNP200	99	87.835	Dasypus_novemcinctus
ENSMMOG00000014167	snrnp200	99	86.636	ENSDORG00000005861	Snrnp200	99	86.732	Dipodomys_ordii
ENSMMOG00000014167	snrnp200	100	72.266	FBgn0263599	l(3)72Ab	99	72.578	Drosophila_melanogaster
ENSMMOG00000014167	snrnp200	95	89.664	ENSETEG00000000162	SNRNP200	74	89.664	Echinops_telfairi
ENSMMOG00000014167	snrnp200	83	80.556	ENSEBUG00000016524	snrnp200	95	80.556	Eptatretus_burgeri
ENSMMOG00000014167	snrnp200	99	87.925	ENSEASG00005001884	SNRNP200	99	87.933	Equus_asinus_asinus
ENSMMOG00000014167	snrnp200	99	89.542	ENSECAG00000019675	SNRNP200	99	89.542	Equus_caballus
ENSMMOG00000014167	snrnp200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSMMOG00000014167	snrnp200	99	94.267	ENSELUG00000018948	snrnp200	99	94.267	Esox_lucius
ENSMMOG00000014167	snrnp200	99	88.998	ENSFCAG00000010699	SNRNP200	99	89.103	Felis_catus
ENSMMOG00000014167	snrnp200	93	86.607	ENSFALG00000001368	-	94	86.607	Ficedula_albicollis
ENSMMOG00000014167	snrnp200	99	88.764	ENSFDAG00000004683	SNRNP200	99	88.868	Fukomys_damarensis
ENSMMOG00000014167	snrnp200	100	91.994	ENSFHEG00000003786	snrnp200	99	92.055	Fundulus_heteroclitus
ENSMMOG00000014167	snrnp200	100	93.131	ENSGMOG00000004881	snrnp200	99	93.008	Gadus_morhua
ENSMMOG00000014167	snrnp200	100	92.322	ENSGAFG00000010807	snrnp200	99	92.384	Gambusia_affinis
ENSMMOG00000014167	snrnp200	100	95.189	ENSGACG00000011474	snrnp200	99	95.122	Gasterosteus_aculeatus
ENSMMOG00000014167	snrnp200	95	88.689	ENSGAGG00000016069	SNRNP200	97	98.387	Gopherus_agassizii
ENSMMOG00000014167	snrnp200	99	88.904	ENSGGOG00000005174	SNRNP200	99	89.009	Gorilla_gorilla
ENSMMOG00000014167	snrnp200	97	92.147	ENSHBUG00000011322	snrnp200	99	92.147	Haplochromis_burtoni
ENSMMOG00000014167	snrnp200	99	88.764	ENSHGLG00000006654	SNRNP200	99	88.868	Heterocephalus_glaber_female
ENSMMOG00000014167	snrnp200	99	88.764	ENSHGLG00100018594	SNRNP200	99	88.868	Heterocephalus_glaber_male
ENSMMOG00000014167	snrnp200	99	88.951	ENSSTOG00000016351	SNRNP200	99	89.056	Ictidomys_tridecemlineatus
ENSMMOG00000014167	snrnp200	99	88.670	ENSJJAG00000023659	Snrnp200	99	88.774	Jaculus_jaculus
ENSMMOG00000014167	snrnp200	100	92.394	ENSKMAG00000003665	snrnp200	99	92.455	Kryptolebias_marmoratus
ENSMMOG00000014167	snrnp200	100	95.787	ENSLBEG00000021585	snrnp200	100	95.787	Labrus_bergylta
ENSMMOG00000014167	snrnp200	82	89.697	ENSLACG00000000226	SNRNP200	99	90.150	Latimeria_chalumnae
ENSMMOG00000014167	snrnp200	100	92.423	ENSLOCG00000015198	snrnp200	99	92.438	Lepisosteus_oculatus
ENSMMOG00000014167	snrnp200	99	88.811	ENSLAFG00000015626	SNRNP200	99	88.915	Loxodonta_africana
ENSMMOG00000014167	snrnp200	99	88.858	ENSMFAG00000040174	SNRNP200	99	91.570	Macaca_fascicularis
ENSMMOG00000014167	snrnp200	99	88.858	ENSMMUG00000023261	SNRNP200	99	88.962	Macaca_mulatta
ENSMMOG00000014167	snrnp200	99	88.811	ENSMNEG00000032398	SNRNP200	99	88.915	Macaca_nemestrina
ENSMMOG00000014167	snrnp200	99	88.904	ENSMLEG00000019083	SNRNP200	99	91.570	Mandrillus_leucophaeus
ENSMMOG00000014167	snrnp200	100	95.087	ENSMAMG00000007851	snrnp200	99	95.019	Mastacembelus_armatus
ENSMMOG00000014167	snrnp200	97	92.147	ENSMZEG00005010787	snrnp200	99	92.147	Maylandia_zebra
ENSMMOG00000014167	snrnp200	97	88.534	ENSMGAG00000001831	SNRNP200	99	88.640	Meleagris_gallopavo
ENSMMOG00000014167	snrnp200	99	88.951	ENSMAUG00000011825	Snrnp200	99	89.056	Mesocricetus_auratus
ENSMMOG00000014167	snrnp200	99	88.951	ENSMICG00000004710	SNRNP200	98	90.986	Microcebus_murinus
ENSMMOG00000014167	snrnp200	99	86.985	ENSMOCG00000011814	Snrnp200	99	87.083	Microtus_ochrogaster
ENSMMOG00000014167	snrnp200	99	88.951	ENSMODG00000008475	SNRNP200	99	89.009	Monodelphis_domestica
ENSMMOG00000014167	snrnp200	99	95.534	ENSMALG00000001973	snrnp200	99	95.534	Monopterus_albus
ENSMMOG00000014167	snrnp200	99	88.811	MGP_CAROLIEiJ_G0024250	Snrnp200	99	88.915	Mus_caroli
ENSMMOG00000014167	snrnp200	99	88.858	ENSMUSG00000003660	Snrnp200	99	88.962	Mus_musculus
ENSMMOG00000014167	snrnp200	99	88.858	MGP_PahariEiJ_G0025695	Snrnp200	99	88.962	Mus_pahari
ENSMMOG00000014167	snrnp200	96	92.265	MGP_SPRETEiJ_G0025170	Snrnp200	99	92.958	Mus_spretus
ENSMMOG00000014167	snrnp200	99	88.998	ENSMPUG00000008949	SNRNP200	99	89.103	Mustela_putorius_furo
ENSMMOG00000014167	snrnp200	99	85.815	ENSMLUG00000027511	-	99	85.909	Myotis_lucifugus
ENSMMOG00000014167	snrnp200	99	88.593	ENSMLUG00000010493	SNRNP200	99	88.696	Myotis_lucifugus
ENSMMOG00000014167	snrnp200	99	88.904	ENSNGAG00000021993	Snrnp200	99	89.009	Nannospalax_galili
ENSMMOG00000014167	snrnp200	90	94.544	ENSNBRG00000017960	snrnp200	98	94.544	Neolamprologus_brichardi
ENSMMOG00000014167	snrnp200	99	85.028	ENSNLEG00000000025	SNRNP200	99	85.213	Nomascus_leucogenys
ENSMMOG00000014167	snrnp200	99	94.845	ENSMEUG00000010532	SNRNP200	78	94.444	Notamacropus_eugenii
ENSMMOG00000014167	snrnp200	96	87.695	ENSOPRG00000015464	SNRNP200	99	85.674	Ochotona_princeps
ENSMMOG00000014167	snrnp200	99	88.764	ENSODEG00000008366	SNRNP200	99	88.868	Octodon_degus
ENSMMOG00000014167	snrnp200	99	95.157	ENSONIG00000010714	snrnp200	99	95.157	Oreochromis_niloticus
ENSMMOG00000014167	snrnp200	99	88.951	ENSOCUG00000009864	SNRNP200	99	89.056	Oryctolagus_cuniculus
ENSMMOG00000014167	snrnp200	99	93.861	ENSORLG00000012286	snrnp200	99	93.888	Oryzias_latipes
ENSMMOG00000014167	snrnp200	99	93.955	ENSORLG00020004648	snrnp200	99	93.982	Oryzias_latipes_hni
ENSMMOG00000014167	snrnp200	99	94.002	ENSORLG00015019114	snrnp200	99	94.029	Oryzias_latipes_hsok
ENSMMOG00000014167	snrnp200	99	94.264	ENSOMEG00000011834	snrnp200	99	94.264	Oryzias_melastigma
ENSMMOG00000014167	snrnp200	99	88.951	ENSOGAG00000006879	SNRNP200	99	89.056	Otolemur_garnettii
ENSMMOG00000014167	snrnp200	99	87.974	ENSOARG00000013949	SNRNP200	99	88.075	Ovis_aries
ENSMMOG00000014167	snrnp200	99	88.904	ENSPPAG00000041559	SNRNP200	99	89.009	Pan_paniscus
ENSMMOG00000014167	snrnp200	99	88.998	ENSPPRG00000004435	SNRNP200	99	89.103	Panthera_pardus
ENSMMOG00000014167	snrnp200	99	88.577	ENSPTIG00000006380	SNRNP200	99	88.680	Panthera_tigris_altaica
ENSMMOG00000014167	snrnp200	99	88.904	ENSPTRG00000012230	SNRNP200	99	89.009	Pan_troglodytes
ENSMMOG00000014167	snrnp200	99	88.858	ENSPANG00000006017	SNRNP200	99	88.962	Papio_anubis
ENSMMOG00000014167	snrnp200	100	93.262	ENSPKIG00000014762	snrnp200	99	93.280	Paramormyrops_kingsleyae
ENSMMOG00000014167	snrnp200	99	87.974	ENSPSIG00000008580	SNRNP200	99	88.028	Pelodiscus_sinensis
ENSMMOG00000014167	snrnp200	99	88.811	ENSPCIG00000023050	SNRNP200	99	88.868	Phascolarctos_cinereus
ENSMMOG00000014167	snrnp200	100	94.712	ENSPFOG00000015110	snrnp200	99	94.784	Poecilia_formosa
ENSMMOG00000014167	snrnp200	97	94.609	ENSPLAG00000006711	snrnp200	99	94.609	Poecilia_latipinna
ENSMMOG00000014167	snrnp200	97	94.609	ENSPMEG00000021166	snrnp200	99	94.609	Poecilia_mexicana
ENSMMOG00000014167	snrnp200	100	94.757	ENSPREG00000008875	snrnp200	99	94.828	Poecilia_reticulata
ENSMMOG00000014167	snrnp200	99	88.904	ENSPPYG00000012068	SNRNP200	99	89.009	Pongo_abelii
ENSMMOG00000014167	snrnp200	95	92.949	ENSPCAG00000008536	SNRNP200	83	97.872	Procavia_capensis
ENSMMOG00000014167	snrnp200	99	88.904	ENSPCOG00000024608	SNRNP200	99	89.009	Propithecus_coquereli
ENSMMOG00000014167	snrnp200	95	88.776	ENSPVAG00000005860	SNRNP200	92	88.776	Pteropus_vampyrus
ENSMMOG00000014167	snrnp200	99	90.483	ENSPNYG00000017476	snrnp200	99	90.483	Pundamilia_nyererei
ENSMMOG00000014167	snrnp200	100	88.723	ENSPNAG00000010998	snrnp200	99	88.769	Pygocentrus_nattereri
ENSMMOG00000014167	snrnp200	99	88.951	ENSRNOG00000012157	Snrnp200	99	89.056	Rattus_norvegicus
ENSMMOG00000014167	snrnp200	99	88.904	ENSRBIG00000044690	-	99	89.009	Rhinopithecus_bieti
ENSMMOG00000014167	snrnp200	99	88.904	ENSRROG00000037952	-	99	89.009	Rhinopithecus_roxellana
ENSMMOG00000014167	snrnp200	99	88.858	ENSSBOG00000035471	SNRNP200	97	91.740	Saimiri_boliviensis_boliviensis
ENSMMOG00000014167	snrnp200	97	88.582	ENSSHAG00000000758	SNRNP200	99	88.640	Sarcophilus_harrisii
ENSMMOG00000014167	snrnp200	99	93.609	ENSSFOG00015018826	snrnp200	99	93.609	Scleropages_formosus
ENSMMOG00000014167	snrnp200	100	95.693	ENSSMAG00000005463	snrnp200	100	95.693	Scophthalmus_maximus
ENSMMOG00000014167	snrnp200	100	96.301	ENSSDUG00000021410	snrnp200	100	96.301	Seriola_dumerili
ENSMMOG00000014167	snrnp200	100	96.161	ENSSLDG00000010884	snrnp200	100	96.161	Seriola_lalandi_dorsalis
ENSMMOG00000014167	snrnp200	95	88.740	ENSSARG00000010728	SNRNP200	96	88.710	Sorex_araneus
ENSMMOG00000014167	snrnp200	99	89.185	ENSSPUG00000003726	-	99	89.244	Sphenodon_punctatus
ENSMMOG00000014167	snrnp200	100	96.395	ENSSPAG00000001842	snrnp200	100	96.395	Stegastes_partitus
ENSMMOG00000014167	snrnp200	99	88.998	ENSSSCG00000008127	SNRNP200	99	89.103	Sus_scrofa
ENSMMOG00000014167	snrnp200	99	81.595	ENSTGUG00000014475	-	100	81.595	Taeniopygia_guttata
ENSMMOG00000014167	snrnp200	99	94.781	ENSTRUG00000001307	snrnp200	99	95.356	Takifugu_rubripes
ENSMMOG00000014167	snrnp200	99	91.549	ENSTNIG00000004320	snrnp200	99	82.880	Tetraodon_nigroviridis
ENSMMOG00000014167	snrnp200	81	92.958	ENSTBEG00000003329	-	67	92.958	Tupaia_belangeri
ENSMMOG00000014167	snrnp200	99	88.764	ENSTTRG00000004983	SNRNP200	99	88.868	Tursiops_truncatus
ENSMMOG00000014167	snrnp200	75	83.430	ENSUAMG00000008395	-	95	83.140	Ursus_americanus
ENSMMOG00000014167	snrnp200	99	88.998	ENSUMAG00000012385	SNRNP200	99	89.103	Ursus_maritimus
ENSMMOG00000014167	snrnp200	87	95.000	ENSVPAG00000006434	SNRNP200	65	95.000	Vicugna_pacos
ENSMMOG00000014167	snrnp200	99	88.790	ENSVVUG00000026247	SNRNP200	99	88.894	Vulpes_vulpes
ENSMMOG00000014167	snrnp200	99	88.634	ENSXETG00000001243	snrnp200	99	88.691	Xenopus_tropicalis
ENSMMOG00000014167	snrnp200	97	94.855	ENSXMAG00000002058	snrnp200	98	94.855	Xiphophorus_maculatus