EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000014358 (Gene tree)
Gene ID: -
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: RAB42%2C member RAS oncogene family a
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 1804 bases
Position: chrKV751371.1:1619471-1621274
Accession: ZDB-GENE-040426-1983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000018969	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000019283	-	657	-	ENSMMOP00000018969	218 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000014358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000014358's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000014358	rab42a	72	40.764	ENSMMOG00000001992	rab41	70	40.764
ENSMMOG00000014358	rab42a	75	42.331	ENSMMOG00000000110	rab15	76	42.331
ENSMMOG00000014358	rab42a	73	44.375	ENSMMOG00000000304	rab30	78	44.375
ENSMMOG00000014358	rab42a	85	41.398	ENSMMOG00000001238	-	84	41.398
ENSMMOG00000014358	rab42a	74	38.788	ENSMMOG00000012367	-	75	38.788
ENSMMOG00000014358	rab42a	97	35.071	ENSMMOG00000006947	rab6ba	94	35.071
ENSMMOG00000014358	rab42a	75	38.323	ENSMMOG00000020069	rab9a	76	38.323
ENSMMOG00000014358	rab42a	78	33.908	ENSMMOG00000001434	RAB7A	83	33.908
ENSMMOG00000014358	rab42a	77	35.714	ENSMMOG00000019258	RAB17	73	35.714
ENSMMOG00000014358	rab42a	82	42.697	ENSMMOG00000018709	RAB1A	89	42.697
ENSMMOG00000014358	rab42a	65	35.461	ENSMMOG00000007703	rab23	74	34.641
ENSMMOG00000014358	rab42a	80	41.714	ENSMMOG00000003924	-	90	41.714
ENSMMOG00000014358	rab42a	78	33.908	ENSMMOG00000021817	-	83	33.908
ENSMMOG00000014358	rab42a	72	41.250	ENSMMOG00000010077	rab33a	75	41.250
ENSMMOG00000014358	rab42a	79	44.509	ENSMMOG00000009833	-	80	44.509
ENSMMOG00000014358	rab42a	87	35.979	ENSMMOG00000015287	rab4a	88	35.979
ENSMMOG00000014358	rab42a	67	43.243	ENSMMOG00000019779	zgc:101559	63	43.243
ENSMMOG00000014358	rab42a	76	35.429	ENSMMOG00000017849	rab18b	80	35.429
ENSMMOG00000014358	rab42a	83	57.222	ENSMMOG00000014549	-	88	57.222
ENSMMOG00000014358	rab42a	85	40.323	ENSMMOG00000001250	-	84	40.323
ENSMMOG00000014358	rab42a	75	43.558	ENSMMOG00000017117	rab11al	79	43.558
ENSMMOG00000014358	rab42a	72	39.506	ENSMMOG00000006631	-	69	39.506
ENSMMOG00000014358	rab42a	79	41.860	ENSMMOG00000020522	rab1ba	86	41.860
ENSMMOG00000014358	rab42a	80	42.286	ENSMMOG00000020140	si:dkey-16l2.16	81	42.286
ENSMMOG00000014358	rab42a	100	54.128	ENSMMOG00000014491	RAB39B	100	54.128
ENSMMOG00000014358	rab42a	97	34.597	ENSMMOG00000018976	rab6bb	94	34.597
ENSMMOG00000014358	rab42a	78	31.351	ENSMMOG00000014415	rasl11a	60	31.351
ENSMMOG00000014358	rab42a	70	44.516	ENSMMOG00000017443	rab33ba	73	44.516
ENSMMOG00000014358	rab42a	77	32.738	ENSMMOG00000021837	rhebl1	88	32.738
ENSMMOG00000014358	rab42a	77	33.333	ENSMMOG00000020986	rheb	89	33.333
ENSMMOG00000014358	rab42a	85	32.105	ENSMMOG00000010936	rab34b	66	32.105
ENSMMOG00000014358	rab42a	75	32.530	ENSMMOG00000006335	si:cabz01085950.1	82	32.530
ENSMMOG00000014358	rab42a	72	42.308	ENSMMOG00000001649	RAB15	73	42.308
ENSMMOG00000014358	rab42a	77	42.262	ENSMMOG00000019157	rab25a	78	42.262
ENSMMOG00000014358	rab42a	52	30.973	ENSMMOG00000018992	-	87	30.952
ENSMMOG00000014358	rab42a	75	36.585	ENSMMOG00000020621	rab5c	74	36.585
ENSMMOG00000014358	rab42a	78	33.918	ENSMMOG00000004059	rab22a	87	33.918
ENSMMOG00000014358	rab42a	85	40.323	ENSMMOG00000017423	-	83	46.789
ENSMMOG00000014358	rab42a	75	37.725	ENSMMOG00000008669	rab9b	75	37.725
ENSMMOG00000014358	rab42a	81	41.243	ENSMMOG00000007917	rab11bb	85	41.243
ENSMMOG00000014358	rab42a	72	38.854	ENSMMOG00000016209	rab6a	75	38.854
ENSMMOG00000014358	rab42a	89	59.184	ENSMMOG00000006846	si:dkey-34d22.5	89	59.184
ENSMMOG00000014358	rab42a	75	35.366	ENSMMOG00000019135	rab5aa	75	35.366
ENSMMOG00000014358	rab42a	69	34.437	ENSMMOG00000017479	kras	86	33.537
ENSMMOG00000014358	rab42a	76	33.529	ENSMMOG00000006440	rab38b	80	33.529
ENSMMOG00000014358	rab42a	89	40.722	ENSMMOG00000007951	rab1ab	94	40.722

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000014358	rab42a	100	93.119	ENSAPOG00000009188	rab42a	100	93.119	Acanthochromis_polyacanthus
ENSMMOG00000014358	rab42a	100	93.119	ENSACIG00000003102	rab42a	100	93.119	Amphilophus_citrinellus
ENSMMOG00000014358	rab42a	100	92.661	ENSAOCG00000012921	rab42a	83	92.661	Amphiprion_ocellaris
ENSMMOG00000014358	rab42a	100	92.661	ENSAPEG00000007713	rab42a	83	92.661	Amphiprion_percula
ENSMMOG00000014358	rab42a	100	91.743	ENSATEG00000009052	rab42a	100	91.743	Anabas_testudineus
ENSMMOG00000014358	rab42a	100	93.119	ENSACLG00000007514	rab42a	100	93.119	Astatotilapia_calliptera
ENSMMOG00000014358	rab42a	100	88.532	ENSAMXG00000032729	rab42a	100	88.532	Astyanax_mexicanus
ENSMMOG00000014358	rab42a	100	90.367	ENSCSEG00000010582	rab42a	100	90.367	Cynoglossus_semilaevis
ENSMMOG00000014358	rab42a	100	88.532	ENSDARG00000034215	rab42a	100	88.532	Danio_rerio
ENSMMOG00000014358	rab42a	90	50.254	ENSDARG00000102580	CU571310.1	93	50.254	Danio_rerio
ENSMMOG00000014358	rab42a	100	87.156	ENSELUG00000010345	rab42a	100	87.156	Esox_lucius
ENSMMOG00000014358	rab42a	100	92.661	ENSFHEG00000013106	rab42a	100	92.661	Fundulus_heteroclitus
ENSMMOG00000014358	rab42a	100	91.743	ENSGAFG00000002141	rab42a	100	91.743	Gambusia_affinis
ENSMMOG00000014358	rab42a	100	93.119	ENSHBUG00000015126	rab42a	82	93.119	Haplochromis_burtoni
ENSMMOG00000014358	rab42a	100	86.239	ENSIPUG00000011376	rab42a	100	86.239	Ictalurus_punctatus
ENSMMOG00000014358	rab42a	100	92.661	ENSKMAG00000007267	rab42a	100	92.661	Kryptolebias_marmoratus
ENSMMOG00000014358	rab42a	100	92.202	ENSLBEG00000001193	rab42a	100	93.119	Labrus_bergylta
ENSMMOG00000014358	rab42a	100	64.679	ENSLACG00000012755	-	100	64.679	Latimeria_chalumnae
ENSMMOG00000014358	rab42a	100	82.110	ENSLOCG00000003453	rab42a	100	82.110	Lepisosteus_oculatus
ENSMMOG00000014358	rab42a	100	49.772	ENSLOCG00000015825	-	99	49.772	Lepisosteus_oculatus
ENSMMOG00000014358	rab42a	100	95.413	ENSMAMG00000002296	rab42a	100	95.413	Mastacembelus_armatus
ENSMMOG00000014358	rab42a	100	93.119	ENSMZEG00005012460	rab42a	82	93.119	Maylandia_zebra
ENSMMOG00000014358	rab42a	100	93.578	ENSNBRG00000021487	rab42a	82	93.578	Neolamprologus_brichardi
ENSMMOG00000014358	rab42a	100	93.578	ENSORLG00000022335	rab42a	100	93.578	Oryzias_latipes
ENSMMOG00000014358	rab42a	100	93.578	ENSORLG00020013895	rab42a	100	93.578	Oryzias_latipes_hni
ENSMMOG00000014358	rab42a	100	93.578	ENSORLG00015004273	rab42a	100	93.578	Oryzias_latipes_hsok
ENSMMOG00000014358	rab42a	100	93.578	ENSOMEG00000020418	rab42a	100	93.578	Oryzias_melastigma
ENSMMOG00000014358	rab42a	99	45.622	ENSPKIG00000015234	-	99	45.622	Paramormyrops_kingsleyae
ENSMMOG00000014358	rab42a	100	77.626	ENSPKIG00000021215	-	100	77.626	Paramormyrops_kingsleyae
ENSMMOG00000014358	rab42a	90	94.924	ENSPMGG00000024112	rab42a	90	94.924	Periophthalmus_magnuspinnatus
ENSMMOG00000014358	rab42a	100	90.826	ENSPFOG00000004838	rab42a	82	90.826	Poecilia_formosa
ENSMMOG00000014358	rab42a	100	91.284	ENSPLAG00000005628	rab42a	100	91.284	Poecilia_latipinna
ENSMMOG00000014358	rab42a	100	90.826	ENSPMEG00000019497	rab42a	100	90.826	Poecilia_mexicana
ENSMMOG00000014358	rab42a	100	91.743	ENSPREG00000013962	rab42a	100	91.743	Poecilia_reticulata
ENSMMOG00000014358	rab42a	100	93.119	ENSPNYG00000010325	rab42a	82	93.119	Pundamilia_nyererei
ENSMMOG00000014358	rab42a	100	88.073	ENSPNAG00000016567	rab42a	100	88.073	Pygocentrus_nattereri
ENSMMOG00000014358	rab42a	100	84.862	ENSSFOG00015020732	rab42a	100	84.862	Scleropages_formosus
ENSMMOG00000014358	rab42a	100	46.575	ENSSFOG00015016000	-	97	46.575	Scleropages_formosus
ENSMMOG00000014358	rab42a	100	91.743	ENSSMAG00000020311	rab42a	100	91.743	Scophthalmus_maximus
ENSMMOG00000014358	rab42a	100	93.578	ENSSDUG00000011851	rab42a	100	93.578	Seriola_dumerili
ENSMMOG00000014358	rab42a	100	93.578	ENSSLDG00000020354	rab42a	100	93.578	Seriola_lalandi_dorsalis
ENSMMOG00000014358	rab42a	100	94.495	ENSSPAG00000016167	rab42a	100	94.495	Stegastes_partitus
ENSMMOG00000014358	rab42a	100	93.119	ENSTRUG00000010224	rab42a	100	93.119	Takifugu_rubripes
ENSMMOG00000014358	rab42a	100	92.202	ENSXCOG00000003428	rab42a	100	92.202	Xiphophorus_couchianus
ENSMMOG00000014358	rab42a	100	92.202	ENSXMAG00000028376	rab42a	100	92.202	Xiphophorus_maculatus