EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000015466 (Gene tree)
Gene ID: -
Gene Symbol: lsm1
Alias: zgc:101136
Full Name: LSM1%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 2850 bases
Position: chrKV751354.1:1153245-1156094
Accession: ZDB-GENE-040801-68
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000020357	LSM	PF01423.22	3.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000020692	-	402	-	ENSMMOP00000020357	133 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000015466's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000015466's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000015466	lsm1	100	84.962	ENSG00000175324	LSM1	100	84.962	Homo_sapiens
ENSMMOG00000015466	lsm1	100	98.496	ENSAPOG00000010833	lsm1	100	98.496	Acanthochromis_polyacanthus
ENSMMOG00000015466	lsm1	100	84.962	ENSAMEG00000011141	LSM1	100	84.962	Ailuropoda_melanoleuca
ENSMMOG00000015466	lsm1	58	100.000	ENSACIG00000019593	lsm1	64	100.000	Amphilophus_citrinellus
ENSMMOG00000015466	lsm1	100	98.496	ENSAOCG00000017997	-	100	98.496	Amphiprion_ocellaris
ENSMMOG00000015466	lsm1	100	98.496	ENSAOCG00000017096	lsm1	100	98.496	Amphiprion_ocellaris
ENSMMOG00000015466	lsm1	100	98.496	ENSAPEG00000011669	lsm1	100	98.496	Amphiprion_percula
ENSMMOG00000015466	lsm1	100	98.496	ENSATEG00000022266	lsm1	100	98.496	Anabas_testudineus
ENSMMOG00000015466	lsm1	100	84.962	ENSANAG00000027785	LSM1	100	84.962	Aotus_nancymaae
ENSMMOG00000015466	lsm1	100	97.744	ENSACLG00000011400	lsm1	100	97.744	Astatotilapia_calliptera
ENSMMOG00000015466	lsm1	100	82.707	ENSAMXG00000005441	lsm1	100	82.707	Astyanax_mexicanus
ENSMMOG00000015466	lsm1	100	84.211	ENSBTAG00000001612	LSM1	100	84.211	Bos_taurus
ENSMMOG00000015466	lsm1	87	50.000	WBGene00003076	lsm-1	90	50.000	Caenorhabditis_elegans
ENSMMOG00000015466	lsm1	100	84.211	ENSCJAG00000048015	LSM1	100	84.211	Callithrix_jacchus
ENSMMOG00000015466	lsm1	100	84.962	ENSCAFG00000006113	LSM1	100	84.962	Canis_familiaris
ENSMMOG00000015466	lsm1	100	84.962	ENSCAFG00020001822	LSM1	100	84.962	Canis_lupus_dingo
ENSMMOG00000015466	lsm1	100	84.962	ENSCHIG00000013194	LSM1	100	84.962	Capra_hircus
ENSMMOG00000015466	lsm1	100	84.962	ENSTSYG00000010394	LSM1	100	84.962	Carlito_syrichta
ENSMMOG00000015466	lsm1	100	84.962	ENSCPOG00000032671	LSM1	100	84.962	Cavia_porcellus
ENSMMOG00000015466	lsm1	100	84.962	ENSCCAG00000037171	LSM1	100	84.962	Cebus_capucinus
ENSMMOG00000015466	lsm1	100	84.962	ENSCATG00000020377	LSM1	100	84.962	Cercocebus_atys
ENSMMOG00000015466	lsm1	100	83.459	ENSCLAG00000001137	LSM1	100	83.459	Chinchilla_lanigera
ENSMMOG00000015466	lsm1	100	84.962	ENSCSAG00000015485	LSM1	100	84.962	Chlorocebus_sabaeus
ENSMMOG00000015466	lsm1	100	84.211	ENSCHOG00000006030	LSM1	100	84.211	Choloepus_hoffmanni
ENSMMOG00000015466	lsm1	95	80.315	ENSCPBG00000006569	LSM1	86	80.315	Chrysemys_picta_bellii
ENSMMOG00000015466	lsm1	99	63.636	ENSCING00000013536	-	100	62.879	Ciona_intestinalis
ENSMMOG00000015466	lsm1	100	84.962	ENSCANG00000019173	LSM1	100	84.962	Colobus_angolensis_palliatus
ENSMMOG00000015466	lsm1	100	84.211	ENSCGRG00001024560	-	100	84.211	Cricetulus_griseus_chok1gshd
ENSMMOG00000015466	lsm1	80	72.072	ENSCGRG00001002259	-	97	72.072	Cricetulus_griseus_chok1gshd
ENSMMOG00000015466	lsm1	100	84.211	ENSCGRG00000006554	-	100	84.211	Cricetulus_griseus_crigri
ENSMMOG00000015466	lsm1	80	72.072	ENSCGRG00000013603	-	97	72.072	Cricetulus_griseus_crigri
ENSMMOG00000015466	lsm1	100	95.489	ENSCSEG00000008319	lsm1	92	95.489	Cynoglossus_semilaevis
ENSMMOG00000015466	lsm1	100	97.744	ENSCSEG00000010570	lsm1	92	97.744	Cynoglossus_semilaevis
ENSMMOG00000015466	lsm1	100	97.744	ENSCVAG00000003871	lsm1	100	97.744	Cyprinodon_variegatus
ENSMMOG00000015466	lsm1	100	81.955	ENSDARG00000043177	lsm1	100	81.955	Danio_rerio
ENSMMOG00000015466	lsm1	100	84.962	ENSDNOG00000046387	-	100	84.962	Dasypus_novemcinctus
ENSMMOG00000015466	lsm1	100	84.211	ENSDNOG00000032911	-	100	84.211	Dasypus_novemcinctus
ENSMMOG00000015466	lsm1	99	80.303	ENSDNOG00000030989	-	99	80.303	Dasypus_novemcinctus
ENSMMOG00000015466	lsm1	89	66.387	ENSDNOG00000046620	-	100	66.387	Dasypus_novemcinctus
ENSMMOG00000015466	lsm1	100	84.962	ENSDORG00000028172	Lsm1	100	84.962	Dipodomys_ordii
ENSMMOG00000015466	lsm1	93	59.677	FBgn0261067	LSm1	91	59.677	Drosophila_melanogaster
ENSMMOG00000015466	lsm1	100	83.459	ENSEASG00005016677	LSM1	100	83.459	Equus_asinus_asinus
ENSMMOG00000015466	lsm1	100	83.459	ENSECAG00000010461	LSM1	100	83.459	Equus_caballus
ENSMMOG00000015466	lsm1	72	77.083	ENSEEUG00000015181	LSM1	97	77.083	Erinaceus_europaeus
ENSMMOG00000015466	lsm1	100	78.195	ENSELUG00000023374	lsm1	100	78.195	Esox_lucius
ENSMMOG00000015466	lsm1	100	93.233	ENSELUG00000002322	lsm1	100	93.233	Esox_lucius
ENSMMOG00000015466	lsm1	100	84.962	ENSFCAG00000039335	LSM1	100	84.962	Felis_catus
ENSMMOG00000015466	lsm1	89	83.898	ENSFALG00000006723	LSM1	100	83.898	Ficedula_albicollis
ENSMMOG00000015466	lsm1	100	84.962	ENSFDAG00000007658	LSM1	100	84.962	Fukomys_damarensis
ENSMMOG00000015466	lsm1	100	97.744	ENSFHEG00000009556	lsm1	100	97.744	Fundulus_heteroclitus
ENSMMOG00000015466	lsm1	100	95.489	ENSGMOG00000016651	lsm1	98	95.489	Gadus_morhua
ENSMMOG00000015466	lsm1	100	84.211	ENSGALG00000003245	LSM1	100	84.211	Gallus_gallus
ENSMMOG00000015466	lsm1	100	97.744	ENSGAFG00000011355	lsm1	100	97.744	Gambusia_affinis
ENSMMOG00000015466	lsm1	100	96.241	ENSGACG00000011763	lsm1	98	96.241	Gasterosteus_aculeatus
ENSMMOG00000015466	lsm1	100	86.466	ENSGAGG00000024065	LSM1	100	86.466	Gopherus_agassizii
ENSMMOG00000015466	lsm1	100	84.962	ENSGGOG00000022658	LSM1	100	84.962	Gorilla_gorilla
ENSMMOG00000015466	lsm1	100	97.744	ENSHBUG00000010897	lsm1	100	97.744	Haplochromis_burtoni
ENSMMOG00000015466	lsm1	100	69.173	ENSHGLG00000017574	-	100	69.173	Heterocephalus_glaber_female
ENSMMOG00000015466	lsm1	100	84.962	ENSHGLG00000005711	LSM1	100	84.962	Heterocephalus_glaber_female
ENSMMOG00000015466	lsm1	100	84.962	ENSHGLG00100017660	LSM1	100	84.962	Heterocephalus_glaber_male
ENSMMOG00000015466	lsm1	100	69.173	ENSHGLG00100012152	-	100	69.173	Heterocephalus_glaber_male
ENSMMOG00000015466	lsm1	100	96.241	ENSHCOG00000017233	lsm1	100	96.241	Hippocampus_comes
ENSMMOG00000015466	lsm1	100	81.203	ENSIPUG00000002312	LSM1	100	81.203	Ictalurus_punctatus
ENSMMOG00000015466	lsm1	62	87.952	ENSSTOG00000026870	LSM1	100	87.952	Ictidomys_tridecemlineatus
ENSMMOG00000015466	lsm1	100	84.211	ENSJJAG00000014605	-	100	84.211	Jaculus_jaculus
ENSMMOG00000015466	lsm1	100	98.496	ENSKMAG00000003016	lsm1	100	98.496	Kryptolebias_marmoratus
ENSMMOG00000015466	lsm1	100	99.248	ENSLBEG00000022352	lsm1	100	99.248	Labrus_bergylta
ENSMMOG00000015466	lsm1	90	82.500	ENSLACG00000010947	LSM1	99	82.500	Latimeria_chalumnae
ENSMMOG00000015466	lsm1	100	86.466	ENSLOCG00000015149	lsm1	100	86.466	Lepisosteus_oculatus
ENSMMOG00000015466	lsm1	100	84.962	ENSLAFG00000003534	LSM1	100	84.962	Loxodonta_africana
ENSMMOG00000015466	lsm1	100	84.962	ENSMFAG00000032661	LSM1	100	84.962	Macaca_fascicularis
ENSMMOG00000015466	lsm1	100	84.962	ENSMLEG00000034535	LSM1	100	84.962	Mandrillus_leucophaeus
ENSMMOG00000015466	lsm1	100	98.496	ENSMAMG00000007464	lsm1	100	98.496	Mastacembelus_armatus
ENSMMOG00000015466	lsm1	100	97.744	ENSMZEG00005010321	lsm1	100	97.744	Maylandia_zebra
ENSMMOG00000015466	lsm1	100	84.211	ENSMGAG00000002125	LSM1	100	84.211	Meleagris_gallopavo
ENSMMOG00000015466	lsm1	100	84.962	ENSMICG00000030726	LSM1	100	84.962	Microcebus_murinus
ENSMMOG00000015466	lsm1	100	84.211	ENSMOCG00000022817	Lsm1	100	84.211	Microtus_ochrogaster
ENSMMOG00000015466	lsm1	100	85.714	ENSMODG00000010732	-	100	85.714	Monodelphis_domestica
ENSMMOG00000015466	lsm1	58	100.000	ENSMALG00000001478	lsm1	82	100.000	Monopterus_albus
ENSMMOG00000015466	lsm1	100	84.962	MGP_CAROLIEiJ_G0030930	Lsm1	100	84.962	Mus_caroli
ENSMMOG00000015466	lsm1	100	84.962	ENSMUSG00000037296	Lsm1	100	84.962	Mus_musculus
ENSMMOG00000015466	lsm1	100	84.962	MGP_PahariEiJ_G0021400	Lsm1	100	84.962	Mus_pahari
ENSMMOG00000015466	lsm1	100	84.962	MGP_SPRETEiJ_G0032049	Lsm1	100	84.962	Mus_spretus
ENSMMOG00000015466	lsm1	100	85.714	ENSMPUG00000009883	LSM1	100	85.714	Mustela_putorius_furo
ENSMMOG00000015466	lsm1	100	84.962	ENSMLUG00000003734	LSM1	100	84.962	Myotis_lucifugus
ENSMMOG00000015466	lsm1	100	84.211	ENSNGAG00000003753	Lsm1	100	84.211	Nannospalax_galili
ENSMMOG00000015466	lsm1	58	100.000	ENSNBRG00000017370	lsm1	66	100.000	Neolamprologus_brichardi
ENSMMOG00000015466	lsm1	100	84.962	ENSNLEG00000029390	LSM1	100	84.962	Nomascus_leucogenys
ENSMMOG00000015466	lsm1	100	85.714	ENSMEUG00000014077	LSM1	100	85.714	Notamacropus_eugenii
ENSMMOG00000015466	lsm1	88	80.342	ENSOPRG00000000333	LSM1	100	80.342	Ochotona_princeps
ENSMMOG00000015466	lsm1	100	84.962	ENSODEG00000004834	LSM1	100	84.962	Octodon_degus
ENSMMOG00000015466	lsm1	100	97.744	ENSONIG00000010782	lsm1	100	97.744	Oreochromis_niloticus
ENSMMOG00000015466	lsm1	100	85.714	ENSOANG00000003256	LSM1	100	85.714	Ornithorhynchus_anatinus
ENSMMOG00000015466	lsm1	100	84.962	ENSOCUG00000015399	LSM1	100	84.962	Oryctolagus_cuniculus
ENSMMOG00000015466	lsm1	100	96.992	ENSORLG00000030288	lsm1	100	96.992	Oryzias_latipes
ENSMMOG00000015466	lsm1	100	95.489	ENSORLG00020006213	-	86	95.489	Oryzias_latipes_hni
ENSMMOG00000015466	lsm1	100	96.992	ENSORLG00020003941	lsm1	100	96.992	Oryzias_latipes_hni
ENSMMOG00000015466	lsm1	100	96.992	ENSORLG00015018350	lsm1	100	96.992	Oryzias_latipes_hsok
ENSMMOG00000015466	lsm1	100	96.992	ENSOMEG00000012454	lsm1	100	96.992	Oryzias_melastigma
ENSMMOG00000015466	lsm1	100	84.962	ENSOGAG00000015161	LSM1	100	84.962	Otolemur_garnettii
ENSMMOG00000015466	lsm1	100	84.962	ENSOARG00000001317	LSM1	100	84.962	Ovis_aries
ENSMMOG00000015466	lsm1	100	84.962	ENSPPAG00000032279	LSM1	100	84.962	Pan_paniscus
ENSMMOG00000015466	lsm1	100	84.962	ENSPPRG00000014172	-	100	84.962	Panthera_pardus
ENSMMOG00000015466	lsm1	100	84.962	ENSPTIG00000010289	LSM1	100	84.962	Panthera_tigris_altaica
ENSMMOG00000015466	lsm1	100	84.962	ENSPTRG00000020169	LSM1	100	84.962	Pan_troglodytes
ENSMMOG00000015466	lsm1	100	84.962	ENSPANG00000008814	LSM1	100	84.962	Papio_anubis
ENSMMOG00000015466	lsm1	100	87.218	ENSPKIG00000001839	lsm1	100	87.218	Paramormyrops_kingsleyae
ENSMMOG00000015466	lsm1	100	78.195	ENSPKIG00000019409	LSM1	99	78.195	Paramormyrops_kingsleyae
ENSMMOG00000015466	lsm1	97	81.395	ENSPSIG00000012563	LSM1	98	81.395	Pelodiscus_sinensis
ENSMMOG00000015466	lsm1	58	100.000	ENSPMGG00000022999	lsm1	73	100.000	Periophthalmus_magnuspinnatus
ENSMMOG00000015466	lsm1	85	71.681	ENSPMAG00000002671	lsm1	100	71.681	Petromyzon_marinus
ENSMMOG00000015466	lsm1	100	84.211	ENSPCIG00000008880	LSM1	100	84.211	Phascolarctos_cinereus
ENSMMOG00000015466	lsm1	100	97.744	ENSPFOG00000016029	lsm1	100	97.744	Poecilia_formosa
ENSMMOG00000015466	lsm1	100	97.744	ENSPLAG00000007879	lsm1	100	97.744	Poecilia_latipinna
ENSMMOG00000015466	lsm1	100	97.744	ENSPMEG00000023550	lsm1	100	97.744	Poecilia_mexicana
ENSMMOG00000015466	lsm1	100	97.744	ENSPREG00000009574	lsm1	100	97.744	Poecilia_reticulata
ENSMMOG00000015466	lsm1	100	84.962	ENSPPYG00000018521	LSM1	100	84.962	Pongo_abelii
ENSMMOG00000015466	lsm1	100	84.962	ENSPCOG00000020901	-	100	84.962	Propithecus_coquereli
ENSMMOG00000015466	lsm1	100	84.962	ENSPVAG00000006016	LSM1	100	84.962	Pteropus_vampyrus
ENSMMOG00000015466	lsm1	100	97.744	ENSPNYG00000018067	lsm1	100	97.744	Pundamilia_nyererei
ENSMMOG00000015466	lsm1	100	81.955	ENSPNAG00000013707	lsm1	100	81.955	Pygocentrus_nattereri
ENSMMOG00000015466	lsm1	100	83.459	ENSRNOG00000015375	Lsm1	100	83.459	Rattus_norvegicus
ENSMMOG00000015466	lsm1	100	84.962	ENSRBIG00000027449	LSM1	100	84.962	Rhinopithecus_bieti
ENSMMOG00000015466	lsm1	100	84.962	ENSRROG00000036074	LSM1	100	84.962	Rhinopithecus_roxellana
ENSMMOG00000015466	lsm1	80	41.593	YJL124C	LSM1	66	41.593	Saccharomyces_cerevisiae
ENSMMOG00000015466	lsm1	100	85.714	ENSSHAG00000017260	LSM1	100	85.714	Sarcophilus_harrisii
ENSMMOG00000015466	lsm1	100	86.466	ENSSFOG00015019528	lsm1	100	86.466	Scleropages_formosus
ENSMMOG00000015466	lsm1	100	98.496	ENSSMAG00000004930	lsm1	100	98.496	Scophthalmus_maximus
ENSMMOG00000015466	lsm1	100	96.992	ENSSDUG00000021823	lsm1	100	96.992	Seriola_dumerili
ENSMMOG00000015466	lsm1	100	96.992	ENSSLDG00000012154	lsm1	100	96.992	Seriola_lalandi_dorsalis
ENSMMOG00000015466	lsm1	100	86.466	ENSSPUG00000014878	LSM1	100	86.466	Sphenodon_punctatus
ENSMMOG00000015466	lsm1	100	97.744	ENSSPAG00000020548	lsm1	100	97.744	Stegastes_partitus
ENSMMOG00000015466	lsm1	100	84.962	ENSSSCG00000039058	LSM1	100	84.962	Sus_scrofa
ENSMMOG00000015466	lsm1	100	85.714	ENSTGUG00000004793	LSM1	100	85.714	Taeniopygia_guttata
ENSMMOG00000015466	lsm1	100	94.737	ENSTRUG00000025239	lsm1	100	94.737	Takifugu_rubripes
ENSMMOG00000015466	lsm1	100	91.729	ENSTNIG00000004055	lsm1	100	91.729	Tetraodon_nigroviridis
ENSMMOG00000015466	lsm1	88	82.906	ENSTBEG00000015884	LSM1	100	82.906	Tupaia_belangeri
ENSMMOG00000015466	lsm1	100	84.962	ENSTTRG00000004482	LSM1	100	84.962	Tursiops_truncatus
ENSMMOG00000015466	lsm1	100	84.962	ENSUAMG00000004103	LSM1	100	84.962	Ursus_americanus
ENSMMOG00000015466	lsm1	100	84.962	ENSUMAG00000009132	LSM1	100	84.962	Ursus_maritimus
ENSMMOG00000015466	lsm1	58	90.909	ENSVPAG00000011593	LSM1	100	90.909	Vicugna_pacos
ENSMMOG00000015466	lsm1	100	84.962	ENSVVUG00000020191	LSM1	100	84.962	Vulpes_vulpes
ENSMMOG00000015466	lsm1	67	60.215	ENSVVUG00000014880	-	99	60.215	Vulpes_vulpes
ENSMMOG00000015466	lsm1	100	81.022	ENSXETG00000009004	lsm1	100	81.022	Xenopus_tropicalis
ENSMMOG00000015466	lsm1	100	96.241	ENSXCOG00000015631	lsm1	100	96.241	Xiphophorus_couchianus
ENSMMOG00000015466	lsm1	100	96.241	ENSXMAG00000026637	lsm1	100	96.241	Xiphophorus_maculatus