EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000015588 (Gene tree)
Gene ID: -
Gene Symbol: sf3a1
Alias: si:dz150f13.2|wu:fc38e01|wu:fc50a11|wu:fj37c05
Full Name: splicing factor 3a%2C subunit 1
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 4716 bases
Position: chrKV751354.1:1435741-1440456
Accession: ZDB-GENE-030616-156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000020502	PRP21_like_P	PF12230.8	8.4e-53	1	1
ENSMMOP00000020502	Surp	PF01805.20	6.6e-46	1	2
ENSMMOP00000020502	Surp	PF01805.20	6.6e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000020842	-	2313	-	ENSMMOP00000020502	770 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000015588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000015588's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000015588	sf3a1	98	83.766	ENSG00000099995	SF3A1	100	81.761	Homo_sapiens
ENSMMOG00000015588	sf3a1	99	91.858	ENSAPOG00000020465	sf3a1	100	91.094	Acanthochromis_polyacanthus
ENSMMOG00000015588	sf3a1	97	82.422	ENSAMEG00000007737	SF3A1	100	81.305	Ailuropoda_melanoleuca
ENSMMOG00000015588	sf3a1	99	91.603	ENSACIG00000020672	sf3a1	100	90.840	Amphilophus_citrinellus
ENSMMOG00000015588	sf3a1	99	91.985	ENSAOCG00000003060	sf3a1	100	91.221	Amphiprion_ocellaris
ENSMMOG00000015588	sf3a1	99	92.112	ENSAPEG00000010735	sf3a1	100	91.349	Amphiprion_percula
ENSMMOG00000015588	sf3a1	97	91.276	ENSATEG00000021201	sf3a1	97	90.495	Anabas_testudineus
ENSMMOG00000015588	sf3a1	96	81.398	ENSAPLG00000009057	SF3A1	100	82.239	Anas_platyrhynchos
ENSMMOG00000015588	sf3a1	99	78.616	ENSACAG00000009415	SF3A1	100	79.136	Anolis_carolinensis
ENSMMOG00000015588	sf3a1	98	82.239	ENSANAG00000032045	SF3A1	100	81.635	Aotus_nancymaae
ENSMMOG00000015588	sf3a1	99	90.318	ENSACLG00000012622	sf3a1	100	91.210	Astatotilapia_calliptera
ENSMMOG00000015588	sf3a1	98	87.261	ENSAMXG00000005382	sf3a1	99	87.134	Astyanax_mexicanus
ENSMMOG00000015588	sf3a1	98	82.239	ENSBTAG00000003390	SF3A1	100	81.635	Bos_taurus
ENSMMOG00000015588	sf3a1	79	45.562	WBGene00004188	prp-21	58	50.735	Caenorhabditis_elegans
ENSMMOG00000015588	sf3a1	98	82.368	ENSCJAG00000010370	SF3A1	100	81.761	Callithrix_jacchus
ENSMMOG00000015588	sf3a1	98	81.982	ENSCAFG00000012559	SF3A1	100	81.509	Canis_familiaris
ENSMMOG00000015588	sf3a1	98	81.982	ENSCAFG00020000838	SF3A1	100	81.509	Canis_lupus_dingo
ENSMMOG00000015588	sf3a1	98	82.879	ENSCHIG00000018642	SF3A1	100	82.129	Capra_hircus
ENSMMOG00000015588	sf3a1	97	82.422	ENSTSYG00000004739	SF3A1	100	81.509	Carlito_syrichta
ENSMMOG00000015588	sf3a1	95	67.432	ENSCAPG00000015414	SF3A1	98	67.568	Cavia_aperea
ENSMMOG00000015588	sf3a1	97	83.464	ENSCPOG00000014589	SF3A1	100	81.384	Cavia_porcellus
ENSMMOG00000015588	sf3a1	98	82.239	ENSCCAG00000032006	SF3A1	100	81.635	Cebus_capucinus
ENSMMOG00000015588	sf3a1	98	82.239	ENSCATG00000029241	SF3A1	100	81.635	Cercocebus_atys
ENSMMOG00000015588	sf3a1	98	82.620	ENSCLAG00000006508	SF3A1	100	81.407	Chinchilla_lanigera
ENSMMOG00000015588	sf3a1	98	82.368	ENSCSAG00000009470	SF3A1	100	81.761	Chlorocebus_sabaeus
ENSMMOG00000015588	sf3a1	57	88.095	ENSCHOG00000005201	SF3A1	61	87.500	Choloepus_hoffmanni
ENSMMOG00000015588	sf3a1	99	79.293	ENSCPBG00000007595	SF3A1	100	80.682	Chrysemys_picta_bellii
ENSMMOG00000015588	sf3a1	98	50.690	ENSCING00000008526	-	98	50.190	Ciona_intestinalis
ENSMMOG00000015588	sf3a1	92	63.158	ENSCSAVG00000005608	-	92	67.279	Ciona_savignyi
ENSMMOG00000015588	sf3a1	98	82.368	ENSCANG00000033564	SF3A1	100	81.761	Colobus_angolensis_palliatus
ENSMMOG00000015588	sf3a1	96	83.026	ENSCGRG00001008933	Sf3a1	100	81.258	Cricetulus_griseus_chok1gshd
ENSMMOG00000015588	sf3a1	96	83.026	ENSCGRG00000006127	Sf3a1	100	81.258	Cricetulus_griseus_crigri
ENSMMOG00000015588	sf3a1	99	88.183	ENSCSEG00000010792	sf3a1	100	88.056	Cynoglossus_semilaevis
ENSMMOG00000015588	sf3a1	99	88.662	ENSCVAG00000004560	sf3a1	100	87.898	Cyprinodon_variegatus
ENSMMOG00000015588	sf3a1	99	85.896	ENSDARG00000041887	sf3a1	100	87.101	Danio_rerio
ENSMMOG00000015588	sf3a1	97	83.095	ENSDNOG00000010629	SF3A1	98	82.526	Dasypus_novemcinctus
ENSMMOG00000015588	sf3a1	98	82.883	ENSDORG00000005613	Sf3a1	100	81.509	Dipodomys_ordii
ENSMMOG00000015588	sf3a1	84	58.394	FBgn0266917	Sf3a1	86	64.014	Drosophila_melanogaster
ENSMMOG00000015588	sf3a1	85	81.259	ENSETEG00000017194	SF3A1	95	82.159	Echinops_telfairi
ENSMMOG00000015588	sf3a1	96	65.952	ENSEBUG00000001285	sf3a1	95	67.300	Eptatretus_burgeri
ENSMMOG00000015588	sf3a1	98	82.750	ENSEASG00005010254	SF3A1	100	81.658	Equus_asinus_asinus
ENSMMOG00000015588	sf3a1	98	82.750	ENSECAG00000023962	SF3A1	100	81.658	Equus_caballus
ENSMMOG00000015588	sf3a1	73	91.803	ENSEEUG00000003159	SF3A1	83	91.803	Erinaceus_europaeus
ENSMMOG00000015588	sf3a1	99	85.171	ENSELUG00000022578	sf3a1	100	84.918	Esox_lucius
ENSMMOG00000015588	sf3a1	98	82.111	ENSFCAG00000011932	SF3A1	100	81.635	Felis_catus
ENSMMOG00000015588	sf3a1	96	80.845	ENSFALG00000006944	SF3A1	100	80.454	Ficedula_albicollis
ENSMMOG00000015588	sf3a1	97	82.943	ENSFDAG00000009560	SF3A1	100	81.761	Fukomys_damarensis
ENSMMOG00000015588	sf3a1	99	88.056	ENSFHEG00000010866	sf3a1	100	87.929	Fundulus_heteroclitus
ENSMMOG00000015588	sf3a1	99	84.949	ENSGMOG00000016024	sf3a1	100	84.566	Gadus_morhua
ENSMMOG00000015588	sf3a1	96	81.506	ENSGALG00000007937	SF3A1	99	81.714	Gallus_gallus
ENSMMOG00000015588	sf3a1	99	89.682	ENSGAFG00000009111	sf3a1	100	88.917	Gambusia_affinis
ENSMMOG00000015588	sf3a1	99	88.071	ENSGACG00000011893	sf3a1	100	88.071	Gasterosteus_aculeatus
ENSMMOG00000015588	sf3a1	95	78.947	ENSGAGG00000000762	SF3A1	99	80.132	Gopherus_agassizii
ENSMMOG00000015588	sf3a1	98	83.766	ENSGGOG00000012631	SF3A1	100	81.761	Gorilla_gorilla
ENSMMOG00000015588	sf3a1	99	91.592	ENSHBUG00000015795	sf3a1	100	91.338	Haplochromis_burtoni
ENSMMOG00000015588	sf3a1	98	82.111	ENSHGLG00000007907	SF3A1	100	81.635	Heterocephalus_glaber_female
ENSMMOG00000015588	sf3a1	98	82.111	ENSHGLG00100013799	SF3A1	100	81.635	Heterocephalus_glaber_male
ENSMMOG00000015588	sf3a1	99	88.363	ENSHCOG00000015423	sf3a1	100	88.107	Hippocampus_comes
ENSMMOG00000015588	sf3a1	99	83.590	ENSIPUG00000002470	sf3a1	99	83.974	Ictalurus_punctatus
ENSMMOG00000015588	sf3a1	97	82.812	ENSSTOG00000013892	SF3A1	100	81.509	Ictidomys_tridecemlineatus
ENSMMOG00000015588	sf3a1	97	82.552	ENSJJAG00000022566	Sf3a1	100	81.533	Jaculus_jaculus
ENSMMOG00000015588	sf3a1	99	88.295	ENSKMAG00000002400	sf3a1	100	88.168	Kryptolebias_marmoratus
ENSMMOG00000015588	sf3a1	99	90.805	ENSLBEG00000022974	sf3a1	100	90.549	Labrus_bergylta
ENSMMOG00000015588	sf3a1	99	80.862	ENSLACG00000003565	SF3A1	100	81.622	Latimeria_chalumnae
ENSMMOG00000015588	sf3a1	99	84.470	ENSLOCG00000008251	sf3a1	99	84.470	Lepisosteus_oculatus
ENSMMOG00000015588	sf3a1	98	81.982	ENSLAFG00000000448	SF3A1	100	81.384	Loxodonta_africana
ENSMMOG00000015588	sf3a1	97	54.286	ENSLAFG00000026032	-	97	54.107	Loxodonta_africana
ENSMMOG00000015588	sf3a1	98	82.239	ENSMFAG00000031979	SF3A1	100	81.635	Macaca_fascicularis
ENSMMOG00000015588	sf3a1	98	82.239	ENSMMUG00000005547	SF3A1	100	81.635	Macaca_mulatta
ENSMMOG00000015588	sf3a1	98	82.239	ENSMNEG00000037229	SF3A1	100	81.635	Macaca_nemestrina
ENSMMOG00000015588	sf3a1	98	82.368	ENSMLEG00000041908	SF3A1	100	81.761	Mandrillus_leucophaeus
ENSMMOG00000015588	sf3a1	98	91.310	ENSMAMG00000006460	sf3a1	96	90.532	Mastacembelus_armatus
ENSMMOG00000015588	sf3a1	99	90.318	ENSMZEG00005009633	sf3a1	100	91.210	Maylandia_zebra
ENSMMOG00000015588	sf3a1	96	81.506	ENSMGAG00000001330	SF3A1	100	82.406	Meleagris_gallopavo
ENSMMOG00000015588	sf3a1	93	78.610	ENSMAUG00000020317	Sf3a1	100	75.443	Mesocricetus_auratus
ENSMMOG00000015588	sf3a1	98	82.111	ENSMICG00000010038	SF3A1	100	81.509	Microcebus_murinus
ENSMMOG00000015588	sf3a1	98	81.853	ENSMOCG00000008438	Sf3a1	100	81.006	Microtus_ochrogaster
ENSMMOG00000015588	sf3a1	98	81.443	ENSMODG00000009270	SF3A1	100	81.108	Monodelphis_domestica
ENSMMOG00000015588	sf3a1	99	89.340	ENSMALG00000000148	sf3a1	100	89.721	Monopterus_albus
ENSMMOG00000015588	sf3a1	98	81.759	MGP_CAROLIEiJ_G0016029	Sf3a1	99	81.911	Mus_caroli
ENSMMOG00000015588	sf3a1	98	81.759	ENSMUSG00000002129	Sf3a1	99	81.911	Mus_musculus
ENSMMOG00000015588	sf3a1	98	82.018	MGP_PahariEiJ_G0016862	Sf3a1	99	82.038	Mus_pahari
ENSMMOG00000015588	sf3a1	98	81.759	MGP_SPRETEiJ_G0016870	Sf3a1	99	81.911	Mus_spretus
ENSMMOG00000015588	sf3a1	98	82.111	ENSMPUG00000013144	SF3A1	100	81.635	Mustela_putorius_furo
ENSMMOG00000015588	sf3a1	97	82.682	ENSMLUG00000002139	SF3A1	100	81.509	Myotis_lucifugus
ENSMMOG00000015588	sf3a1	98	83.398	ENSNGAG00000016977	Sf3a1	100	81.407	Nannospalax_galili
ENSMMOG00000015588	sf3a1	99	91.360	ENSNBRG00000016642	sf3a1	100	91.105	Neolamprologus_brichardi
ENSMMOG00000015588	sf3a1	98	82.368	ENSNLEG00000003686	SF3A1	100	81.761	Nomascus_leucogenys
ENSMMOG00000015588	sf3a1	93	74.049	ENSMEUG00000008741	SF3A1	100	72.405	Notamacropus_eugenii
ENSMMOG00000015588	sf3a1	97	83.073	ENSOPRG00000016636	SF3A1	100	81.910	Ochotona_princeps
ENSMMOG00000015588	sf3a1	98	82.705	ENSODEG00000002571	SF3A1	100	81.738	Octodon_degus
ENSMMOG00000015588	sf3a1	99	91.847	ENSONIG00000010848	sf3a1	100	91.592	Oreochromis_niloticus
ENSMMOG00000015588	sf3a1	97	82.422	ENSOCUG00000007633	SF3A1	100	81.258	Oryctolagus_cuniculus
ENSMMOG00000015588	sf3a1	95	89.495	ENSORLG00000013050	sf3a1	99	89.362	Oryzias_latipes
ENSMMOG00000015588	sf3a1	98	87.051	ENSORLG00020003236	sf3a1	95	89.628	Oryzias_latipes_hni
ENSMMOG00000015588	sf3a1	99	89.299	ENSORLG00015017411	sf3a1	100	89.172	Oryzias_latipes_hsok
ENSMMOG00000015588	sf3a1	99	89.682	ENSOMEG00000013362	sf3a1	100	89.427	Oryzias_melastigma
ENSMMOG00000015588	sf3a1	97	82.682	ENSOGAG00000012931	SF3A1	100	81.635	Otolemur_garnettii
ENSMMOG00000015588	sf3a1	98	80.695	ENSOARG00000006849	SF3A1	100	80.126	Ovis_aries
ENSMMOG00000015588	sf3a1	98	82.987	ENSPPAG00000041790	SF3A1	100	81.006	Pan_paniscus
ENSMMOG00000015588	sf3a1	98	82.111	ENSPPRG00000004391	SF3A1	100	81.635	Panthera_pardus
ENSMMOG00000015588	sf3a1	97	82.422	ENSPTIG00000000844	SF3A1	99	83.073	Panthera_tigris_altaica
ENSMMOG00000015588	sf3a1	98	83.766	ENSPTRG00000014240	SF3A1	100	81.761	Pan_troglodytes
ENSMMOG00000015588	sf3a1	98	82.368	ENSPANG00000020772	SF3A1	100	81.761	Papio_anubis
ENSMMOG00000015588	sf3a1	82	92.308	ENSPSIG00000012803	SF3A1	99	92.308	Pelodiscus_sinensis
ENSMMOG00000015588	sf3a1	97	86.711	ENSPMGG00000023096	sf3a1	100	88.289	Periophthalmus_magnuspinnatus
ENSMMOG00000015588	sf3a1	96	82.895	ENSPEMG00000009494	Sf3a1	100	81.132	Peromyscus_maniculatus_bairdii
ENSMMOG00000015588	sf3a1	67	74.954	ENSPMAG00000007139	-	100	69.333	Petromyzon_marinus
ENSMMOG00000015588	sf3a1	98	82.055	ENSPCIG00000022692	SF3A1	100	81.108	Phascolarctos_cinereus
ENSMMOG00000015588	sf3a1	99	80.946	ENSPFOG00000016768	sf3a1	100	80.946	Poecilia_formosa
ENSMMOG00000015588	sf3a1	99	89.708	ENSPLAG00000017268	sf3a1	100	88.945	Poecilia_latipinna
ENSMMOG00000015588	sf3a1	97	90.526	ENSPMEG00000019811	sf3a1	100	92.547	Poecilia_mexicana
ENSMMOG00000015588	sf3a1	99	89.962	ENSPREG00000010347	sf3a1	100	89.199	Poecilia_reticulata
ENSMMOG00000015588	sf3a1	98	82.368	ENSPPYG00000011707	SF3A1	100	81.761	Pongo_abelii
ENSMMOG00000015588	sf3a1	59	85.537	ENSPCAG00000003266	SF3A1	57	85.537	Procavia_capensis
ENSMMOG00000015588	sf3a1	98	82.111	ENSPCOG00000026630	SF3A1	100	81.509	Propithecus_coquereli
ENSMMOG00000015588	sf3a1	95	82.329	ENSPVAG00000017719	SF3A1	94	82.999	Pteropus_vampyrus
ENSMMOG00000015588	sf3a1	99	91.465	ENSPNYG00000018706	sf3a1	100	91.210	Pundamilia_nyererei
ENSMMOG00000015588	sf3a1	98	86.607	ENSPNAG00000003721	sf3a1	99	86.097	Pygocentrus_nattereri
ENSMMOG00000015588	sf3a1	97	81.901	ENSRNOG00000005218	Sf3a1	99	81.345	Rattus_norvegicus
ENSMMOG00000015588	sf3a1	98	82.368	ENSRBIG00000032167	SF3A1	100	81.761	Rhinopithecus_bieti
ENSMMOG00000015588	sf3a1	98	82.368	ENSRROG00000044908	SF3A1	100	81.761	Rhinopithecus_roxellana
ENSMMOG00000015588	sf3a1	93	82.721	ENSSBOG00000021960	SF3A1	95	86.025	Saimiri_boliviensis_boliviensis
ENSMMOG00000015588	sf3a1	99	78.672	ENSSHAG00000003666	SF3A1	99	79.310	Sarcophilus_harrisii
ENSMMOG00000015588	sf3a1	99	85.841	ENSSFOG00015004579	sf3a1	100	86.220	Scleropages_formosus
ENSMMOG00000015588	sf3a1	99	88.889	ENSSMAG00000004275	sf3a1	100	88.761	Scophthalmus_maximus
ENSMMOG00000015588	sf3a1	99	92.994	ENSSDUG00000022219	sf3a1	100	92.739	Seriola_dumerili
ENSMMOG00000015588	sf3a1	99	92.994	ENSSLDG00000012642	sf3a1	100	92.739	Seriola_lalandi_dorsalis
ENSMMOG00000015588	sf3a1	97	80.834	ENSSARG00000005960	SF3A1	99	80.574	Sorex_araneus
ENSMMOG00000015588	sf3a1	96	81.014	ENSSPUG00000018863	SF3A1	100	81.047	Sphenodon_punctatus
ENSMMOG00000015588	sf3a1	99	92.994	ENSSPAG00000011856	sf3a1	100	92.739	Stegastes_partitus
ENSMMOG00000015588	sf3a1	98	82.239	ENSSSCG00000010002	SF3A1	100	81.761	Sus_scrofa
ENSMMOG00000015588	sf3a1	96	81.423	ENSTGUG00000010547	SF3A1	100	82.536	Taeniopygia_guttata
ENSMMOG00000015588	sf3a1	99	88.235	ENSTRUG00000006118	sf3a1	100	87.852	Takifugu_rubripes
ENSMMOG00000015588	sf3a1	61	82.836	ENSTNIG00000005713	sf3a1	88	90.826	Tetraodon_nigroviridis
ENSMMOG00000015588	sf3a1	98	75.418	ENSTBEG00000012771	SF3A1	100	75.251	Tupaia_belangeri
ENSMMOG00000015588	sf3a1	98	81.748	ENSTTRG00000001535	SF3A1	100	81.281	Tursiops_truncatus
ENSMMOG00000015588	sf3a1	98	80.101	ENSUAMG00000006750	SF3A1	99	80.735	Ursus_americanus
ENSMMOG00000015588	sf3a1	99	82.429	ENSUMAG00000016665	SF3A1	100	82.429	Ursus_maritimus
ENSMMOG00000015588	sf3a1	98	81.982	ENSVVUG00000003075	SF3A1	100	81.509	Vulpes_vulpes
ENSMMOG00000015588	sf3a1	99	77.261	ENSXETG00000016144	sf3a1	100	77.261	Xenopus_tropicalis
ENSMMOG00000015588	sf3a1	99	89.172	ENSXCOG00000015653	sf3a1	100	88.408	Xiphophorus_couchianus
ENSMMOG00000015588	sf3a1	99	89.427	ENSXMAG00000002753	sf3a1	100	88.662	Xiphophorus_maculatus