EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000016399 (Gene tree)
Gene ID: -
Gene Symbol: srrt
Alias: CHUNP6881|ars2|zgc:92060
Full Name: serrate RNA effector molecule homolog (Arabidopsis)
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 7794 bases
Position: chrKV751332.1:3734008-3741801
Accession: ZDB-GENE-020419-13
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000021585	ARS2	PF04959.13	1e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000021942	-	2481	-	ENSMMOP00000021585	826 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000016399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000016399's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000016399	srrt	82	55.177	ENSMMOG00000011137	-	99	52.033

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000016399	srrt	54	75.488	ENSG00000087087	SRRT	98	85.484	Homo_sapiens
ENSMMOG00000016399	srrt	86	95.833	ENSAPOG00000002304	srrt	95	84.716	Acanthochromis_polyacanthus
ENSMMOG00000016399	srrt	54	76.044	ENSAMEG00000014506	SRRT	95	64.261	Ailuropoda_melanoleuca
ENSMMOG00000016399	srrt	95	86.038	ENSACIG00000015795	srrt	95	85.786	Amphilophus_citrinellus
ENSMMOG00000016399	srrt	92	55.502	ENSAOCG00000009189	-	95	58.145	Amphiprion_ocellaris
ENSMMOG00000016399	srrt	88	94.203	ENSAOCG00000009693	srrt	95	85.660	Amphiprion_ocellaris
ENSMMOG00000016399	srrt	92	55.502	ENSAPEG00000020016	-	95	58.145	Amphiprion_percula
ENSMMOG00000016399	srrt	88	94.565	ENSAPEG00000003646	srrt	95	85.088	Amphiprion_percula
ENSMMOG00000016399	srrt	95	84.383	ENSATEG00000014425	srrt	95	84.577	Anabas_testudineus
ENSMMOG00000016399	srrt	56	60.243	ENSATEG00000003652	-	97	59.848	Anabas_testudineus
ENSMMOG00000016399	srrt	54	73.261	ENSACAG00000001014	SRRT	95	64.671	Anolis_carolinensis
ENSMMOG00000016399	srrt	54	74.359	ENSANAG00000031718	SRRT	95	65.562	Aotus_nancymaae
ENSMMOG00000016399	srrt	87	90.110	ENSACLG00000013156	srrt	92	82.536	Astatotilapia_calliptera
ENSMMOG00000016399	srrt	80	64.346	ENSACLG00000009423	-	95	56.557	Astatotilapia_calliptera
ENSMMOG00000016399	srrt	54	73.978	ENSBTAG00000001134	SRRT	95	64.852	Bos_taurus
ENSMMOG00000016399	srrt	72	40.291	WBGene00017085	E01A2.2	85	42.380	Caenorhabditis_elegans
ENSMMOG00000016399	srrt	54	73.548	ENSCJAG00000014917	SRRT	95	65.603	Callithrix_jacchus
ENSMMOG00000016399	srrt	96	63.329	ENSCAFG00000023538	SRRT	95	65.839	Canis_familiaris
ENSMMOG00000016399	srrt	98	65.029	ENSCAFG00020013358	SRRT	99	63.735	Canis_lupus_dingo
ENSMMOG00000016399	srrt	90	74.459	ENSCHIG00000010495	SRRT	95	65.476	Capra_hircus
ENSMMOG00000016399	srrt	97	59.425	ENSTSYG00000036426	SRRT	99	63.314	Carlito_syrichta
ENSMMOG00000016399	srrt	54	75.546	ENSCAPG00000013586	SRRT	99	65.030	Cavia_aperea
ENSMMOG00000016399	srrt	54	73.987	ENSCPOG00000001739	SRRT	95	64.982	Cavia_porcellus
ENSMMOG00000016399	srrt	54	74.359	ENSCCAG00000015877	SRRT	95	65.562	Cebus_capucinus
ENSMMOG00000016399	srrt	54	74.624	ENSCATG00000036306	SRRT	97	64.871	Cercocebus_atys
ENSMMOG00000016399	srrt	96	65.125	ENSCLAG00000007568	SRRT	99	65.392	Chinchilla_lanigera
ENSMMOG00000016399	srrt	54	74.359	ENSCSAG00000017996	SRRT	95	65.485	Chlorocebus_sabaeus
ENSMMOG00000016399	srrt	58	70.064	ENSCHOG00000007815	SRRT	68	70.064	Choloepus_hoffmanni
ENSMMOG00000016399	srrt	95	51.955	ENSCPBG00000011553	SRRT	94	51.950	Chrysemys_picta_bellii
ENSMMOG00000016399	srrt	100	42.536	ENSCING00000003506	-	86	45.382	Ciona_intestinalis
ENSMMOG00000016399	srrt	100	42.265	ENSCSAVG00000008394	-	81	55.747	Ciona_savignyi
ENSMMOG00000016399	srrt	54	74.624	ENSCANG00000034556	SRRT	95	65.243	Colobus_angolensis_palliatus
ENSMMOG00000016399	srrt	54	74.145	ENSCGRG00001001594	Srrt	95	66.112	Cricetulus_griseus_chok1gshd
ENSMMOG00000016399	srrt	72	80.392	ENSCGRG00000007292	Srrt	97	65.564	Cricetulus_griseus_crigri
ENSMMOG00000016399	srrt	92	55.793	ENSCSEG00000005233	-	95	56.643	Cynoglossus_semilaevis
ENSMMOG00000016399	srrt	95	82.818	ENSCVAG00000019848	srrt	95	83.499	Cyprinodon_variegatus
ENSMMOG00000016399	srrt	89	56.471	ENSCVAG00000017344	-	95	56.753	Cyprinodon_variegatus
ENSMMOG00000016399	srrt	87	82.713	ENSDARG00000017762	srrt	95	73.294	Danio_rerio
ENSMMOG00000016399	srrt	54	74.359	ENSDNOG00000003851	SRRT	95	65.366	Dasypus_novemcinctus
ENSMMOG00000016399	srrt	54	75.054	ENSDORG00000005584	Srrt	100	67.179	Dipodomys_ordii
ENSMMOG00000016399	srrt	86	51.852	FBgn0033062	Ars2	81	53.595	Drosophila_melanogaster
ENSMMOG00000016399	srrt	77	71.459	ENSETEG00000016175	SRRT	78	71.429	Echinops_telfairi
ENSMMOG00000016399	srrt	76	53.905	ENSEBUG00000008517	-	88	52.986	Eptatretus_burgeri
ENSMMOG00000016399	srrt	54	74.359	ENSEASG00005016956	SRRT	95	65.566	Equus_asinus_asinus
ENSMMOG00000016399	srrt	54	74.359	ENSECAG00000012292	SRRT	95	65.842	Equus_caballus
ENSMMOG00000016399	srrt	80	76.042	ENSEEUG00000009117	SRRT	81	76.087	Erinaceus_europaeus
ENSMMOG00000016399	srrt	92	57.920	ENSELUG00000021216	-	95	59.577	Esox_lucius
ENSMMOG00000016399	srrt	88	82.174	ENSELUG00000006651	srrt	95	72.465	Esox_lucius
ENSMMOG00000016399	srrt	54	74.359	ENSFCAG00000006855	SRRT	95	65.957	Felis_catus
ENSMMOG00000016399	srrt	54	74.330	ENSFDAG00000021347	SRRT	95	64.149	Fukomys_damarensis
ENSMMOG00000016399	srrt	80	92.857	ENSFHEG00000002756	srrt	90	92.857	Fundulus_heteroclitus
ENSMMOG00000016399	srrt	54	56.751	ENSFHEG00000004105	-	99	55.152	Fundulus_heteroclitus
ENSMMOG00000016399	srrt	69	65.035	ENSGMOG00000018694	-	91	71.429	Gadus_morhua
ENSMMOG00000016399	srrt	95	72.989	ENSGMOG00000018619	srrt	95	73.583	Gadus_morhua
ENSMMOG00000016399	srrt	92	55.781	ENSGAFG00000020383	-	95	57.266	Gambusia_affinis
ENSMMOG00000016399	srrt	81	65.550	ENSGACG00000001100	-	95	56.257	Gasterosteus_aculeatus
ENSMMOG00000016399	srrt	95	82.227	ENSGACG00000020387	srrt	95	82.423	Gasterosteus_aculeatus
ENSMMOG00000016399	srrt	54	74.624	ENSGGOG00000001508	SRRT	96	65.718	Gorilla_gorilla
ENSMMOG00000016399	srrt	87	90.217	ENSHBUG00000002942	srrt	92	82.656	Haplochromis_burtoni
ENSMMOG00000016399	srrt	96	63.722	ENSHGLG00000008344	Srrt	95	66.733	Heterocephalus_glaber_female
ENSMMOG00000016399	srrt	96	64.218	ENSHGLG00100018857	Srrt	95	67.335	Heterocephalus_glaber_male
ENSMMOG00000016399	srrt	92	56.282	ENSHCOG00000008904	-	95	55.875	Hippocampus_comes
ENSMMOG00000016399	srrt	98	81.039	ENSHCOG00000005403	srrt	95	80.669	Hippocampus_comes
ENSMMOG00000016399	srrt	84	80.440	ENSIPUG00000021150	srrt	95	69.941	Ictalurus_punctatus
ENSMMOG00000016399	srrt	54	74.624	ENSSTOG00000013776	SRRT	95	65.955	Ictidomys_tridecemlineatus
ENSMMOG00000016399	srrt	96	65.233	ENSJJAG00000010446	Srrt	97	66.469	Jaculus_jaculus
ENSMMOG00000016399	srrt	95	84.625	ENSKMAG00000013599	srrt	95	83.875	Kryptolebias_marmoratus
ENSMMOG00000016399	srrt	53	64.883	ENSLBEG00000028983	-	76	66.784	Labrus_bergylta
ENSMMOG00000016399	srrt	98	86.627	ENSLBEG00000016308	srrt	95	86.156	Labrus_bergylta
ENSMMOG00000016399	srrt	95	56.250	ENSLACG00000001089	SRRT	95	57.265	Latimeria_chalumnae
ENSMMOG00000016399	srrt	81	72.247	ENSLOCG00000013658	srrt	99	64.808	Lepisosteus_oculatus
ENSMMOG00000016399	srrt	96	64.066	ENSLAFG00000007725	SRRT	95	65.517	Loxodonta_africana
ENSMMOG00000016399	srrt	54	74.624	ENSMFAG00000033745	SRRT	99	64.754	Macaca_fascicularis
ENSMMOG00000016399	srrt	96	63.164	ENSMMUG00000021255	SRRT	95	65.485	Macaca_mulatta
ENSMMOG00000016399	srrt	54	74.359	ENSMNEG00000041864	SRRT	97	64.754	Macaca_nemestrina
ENSMMOG00000016399	srrt	54	74.624	ENSMLEG00000029479	SRRT	98	64.754	Mandrillus_leucophaeus
ENSMMOG00000016399	srrt	87	54.130	ENSMAMG00000010681	-	95	57.751	Mastacembelus_armatus
ENSMMOG00000016399	srrt	80	64.557	ENSMZEG00005028002	-	95	56.674	Maylandia_zebra
ENSMMOG00000016399	srrt	87	90.110	ENSMZEG00005016135	srrt	92	82.536	Maylandia_zebra
ENSMMOG00000016399	srrt	54	74.145	ENSMAUG00000011386	Srrt	99	66.920	Mesocricetus_auratus
ENSMMOG00000016399	srrt	54	74.573	ENSMICG00000009471	SRRT	97	64.637	Microcebus_murinus
ENSMMOG00000016399	srrt	54	74.359	ENSMOCG00000001971	Srrt	97	65.511	Microtus_ochrogaster
ENSMMOG00000016399	srrt	54	70.701	ENSMODG00000004862	SRRT	95	67.992	Monodelphis_domestica
ENSMMOG00000016399	srrt	90	78.491	ENSMALG00000018604	srrt	99	76.775	Monopterus_albus
ENSMMOG00000016399	srrt	69	44.483	ENSMALG00000005567	-	100	44.274	Monopterus_albus
ENSMMOG00000016399	srrt	54	75.983	MGP_CAROLIEiJ_G0027870	Srrt	99	69.403	Mus_caroli
ENSMMOG00000016399	srrt	54	75.983	ENSMUSG00000037364	Srrt	99	69.403	Mus_musculus
ENSMMOG00000016399	srrt	54	76.044	MGP_PahariEiJ_G0024456	Srrt	99	69.403	Mus_pahari
ENSMMOG00000016399	srrt	54	75.983	MGP_SPRETEiJ_G0028875	Srrt	99	69.403	Mus_spretus
ENSMMOG00000016399	srrt	54	74.359	ENSMPUG00000015839	SRRT	95	65.839	Mustela_putorius_furo
ENSMMOG00000016399	srrt	54	74.145	ENSMLUG00000009975	SRRT	95	65.566	Myotis_lucifugus
ENSMMOG00000016399	srrt	54	74.359	ENSNGAG00000023715	Srrt	100	65.629	Nannospalax_galili
ENSMMOG00000016399	srrt	95	59.124	ENSNLEG00000011987	SRRT	100	60.194	Nomascus_leucogenys
ENSMMOG00000016399	srrt	96	52.725	ENSMEUG00000011941	SRRT	94	52.998	Notamacropus_eugenii
ENSMMOG00000016399	srrt	64	73.485	ENSOPRG00000002502	-	67	74.242	Ochotona_princeps
ENSMMOG00000016399	srrt	54	75.764	ENSODEG00000016856	SRRT	99	66.023	Octodon_degus
ENSMMOG00000016399	srrt	87	88.793	ENSONIG00000004242	srrt	95	79.463	Oreochromis_niloticus
ENSMMOG00000016399	srrt	92	56.250	ENSONIG00000016080	-	95	57.243	Oreochromis_niloticus
ENSMMOG00000016399	srrt	98	80.491	ENSORLG00000008120	srrt	95	80.120	Oryzias_latipes
ENSMMOG00000016399	srrt	98	79.790	ENSORLG00020003058	srrt	95	79.760	Oryzias_latipes_hni
ENSMMOG00000016399	srrt	98	80.140	ENSORLG00015008062	srrt	95	79.880	Oryzias_latipes_hsok
ENSMMOG00000016399	srrt	92	59.524	ENSOMEG00000006963	-	95	59.492	Oryzias_melastigma
ENSMMOG00000016399	srrt	98	81.595	ENSOMEG00000003155	srrt	95	82.368	Oryzias_melastigma
ENSMMOG00000016399	srrt	54	74.359	ENSOGAG00000017242	SRRT	95	65.721	Otolemur_garnettii
ENSMMOG00000016399	srrt	54	74.242	ENSOARG00000015645	SRRT	95	65.357	Ovis_aries
ENSMMOG00000016399	srrt	54	74.624	ENSPPAG00000041090	SRRT	97	63.817	Pan_paniscus
ENSMMOG00000016399	srrt	54	74.409	ENSPPRG00000009557	SRRT	95	65.955	Panthera_pardus
ENSMMOG00000016399	srrt	54	74.359	ENSPTIG00000014355	SRRT	95	65.957	Panthera_tigris_altaica
ENSMMOG00000016399	srrt	54	74.624	ENSPTRG00000019511	SRRT	100	63.572	Pan_troglodytes
ENSMMOG00000016399	srrt	54	72.899	ENSPANG00000020763	SRRT	96	64.754	Papio_anubis
ENSMMOG00000016399	srrt	54	79.295	ENSPKIG00000022212	-	95	68.389	Paramormyrops_kingsleyae
ENSMMOG00000016399	srrt	98	73.646	ENSPKIG00000005434	srrt	95	72.346	Paramormyrops_kingsleyae
ENSMMOG00000016399	srrt	54	74.172	ENSPSIG00000016311	SRRT	95	65.108	Pelodiscus_sinensis
ENSMMOG00000016399	srrt	98	79.904	ENSPMGG00000002841	srrt	95	79.506	Periophthalmus_magnuspinnatus
ENSMMOG00000016399	srrt	54	76.044	ENSPEMG00000010834	Srrt	99	66.990	Peromyscus_maniculatus_bairdii
ENSMMOG00000016399	srrt	96	55.066	ENSPMAG00000009614	-	95	55.078	Petromyzon_marinus
ENSMMOG00000016399	srrt	54	71.915	ENSPCIG00000000816	SRRT	95	63.583	Phascolarctos_cinereus
ENSMMOG00000016399	srrt	92	55.852	ENSPFOG00000016554	-	95	57.265	Poecilia_formosa
ENSMMOG00000016399	srrt	92	55.471	ENSPLAG00000004526	-	95	56.899	Poecilia_latipinna
ENSMMOG00000016399	srrt	80	96.209	ENSPMEG00000001182	srrt	95	80.714	Poecilia_mexicana
ENSMMOG00000016399	srrt	88	55.376	ENSPMEG00000001520	-	93	56.888	Poecilia_mexicana
ENSMMOG00000016399	srrt	95	80.071	ENSPREG00000022308	srrt	95	81.071	Poecilia_reticulata
ENSMMOG00000016399	srrt	50	65.161	ENSPPYG00000017432	SRRT	95	55.516	Pongo_abelii
ENSMMOG00000016399	srrt	54	72.304	ENSPCAG00000001621	SRRT	95	63.318	Procavia_capensis
ENSMMOG00000016399	srrt	54	74.624	ENSPCOG00000025751	SRRT	95	65.366	Propithecus_coquereli
ENSMMOG00000016399	srrt	68	66.667	ENSPVAG00000000834	SRRT	100	58.177	Pteropus_vampyrus
ENSMMOG00000016399	srrt	87	90.217	ENSPNYG00000018710	srrt	95	82.775	Pundamilia_nyererei
ENSMMOG00000016399	srrt	83	87.975	ENSPNAG00000010629	srrt	94	58.160	Pygocentrus_nattereri
ENSMMOG00000016399	srrt	54	65.502	ENSRNOG00000048277	AABR07035787.1	92	65.284	Rattus_norvegicus
ENSMMOG00000016399	srrt	54	74.359	ENSRBIG00000035718	SRRT	97	64.754	Rhinopithecus_bieti
ENSMMOG00000016399	srrt	54	74.359	ENSRROG00000030622	SRRT	98	64.754	Rhinopithecus_roxellana
ENSMMOG00000016399	srrt	54	74.624	ENSSBOG00000033570	SRRT	96	65.677	Saimiri_boliviensis_boliviensis
ENSMMOG00000016399	srrt	54	72.068	ENSSHAG00000007349	-	99	61.171	Sarcophilus_harrisii
ENSMMOG00000016399	srrt	94	72.608	ENSSFOG00015017293	srrt	95	73.522	Scleropages_formosus
ENSMMOG00000016399	srrt	95	87.673	ENSSMAG00000015342	srrt	95	87.406	Scophthalmus_maximus
ENSMMOG00000016399	srrt	54	61.277	ENSSMAG00000018195	-	95	55.748	Scophthalmus_maximus
ENSMMOG00000016399	srrt	54	54.526	ENSSDUG00000002051	-	100	53.157	Seriola_dumerili
ENSMMOG00000016399	srrt	95	85.928	ENSSLDG00000017477	srrt	95	86.550	Seriola_lalandi_dorsalis
ENSMMOG00000016399	srrt	54	56.769	ENSSPAG00000018943	-	99	54.970	Stegastes_partitus
ENSMMOG00000016399	srrt	51	73.094	ENSSSCG00000024789	SRRT	100	64.087	Sus_scrofa
ENSMMOG00000016399	srrt	90	53.992	ENSTRUG00000000023	-	94	55.185	Takifugu_rubripes
ENSMMOG00000016399	srrt	89	88.055	ENSTRUG00000016075	srrt	95	80.048	Takifugu_rubripes
ENSMMOG00000016399	srrt	92	52.754	ENSTNIG00000003111	-	95	54.340	Tetraodon_nigroviridis
ENSMMOG00000016399	srrt	73	72.948	ENSTNIG00000011779	srrt	100	74.769	Tetraodon_nigroviridis
ENSMMOG00000016399	srrt	62	77.591	ENSTBEG00000005212	SRRT	57	78.571	Tupaia_belangeri
ENSMMOG00000016399	srrt	54	74.359	ENSTTRG00000011104	SRRT	95	65.839	Tursiops_truncatus
ENSMMOG00000016399	srrt	54	74.359	ENSUAMG00000027997	SRRT	98	65.957	Ursus_americanus
ENSMMOG00000016399	srrt	54	74.359	ENSUMAG00000011295	SRRT	95	65.957	Ursus_maritimus
ENSMMOG00000016399	srrt	96	63.329	ENSVVUG00000023572	SRRT	95	65.839	Vulpes_vulpes
ENSMMOG00000016399	srrt	75	75.843	ENSXETG00000025124	srrt	95	54.673	Xenopus_tropicalis
ENSMMOG00000016399	srrt	59	50.716	ENSXCOG00000013105	-	100	51.429	Xiphophorus_couchianus
ENSMMOG00000016399	srrt	92	54.855	ENSXMAG00000002090	-	95	57.160	Xiphophorus_maculatus