EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000016406 (Gene tree)
Gene ID: -
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 67252 bases
Position: chrKV751341.1:9239046-9306297
Accession: ZDB-GENE-030131-497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000021593	ResIII	PF04851.15	1.1e-05	1	1
ENSMMOP00000021593	BRK	PF07533.16	6.7e-32	1	2
ENSMMOP00000021593	BRK	PF07533.16	6.7e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000021950	-	8514	-	ENSMMOP00000021593	2837 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000016406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000016406's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000016406	chd9	61	60.936	ENSMMOG00000013335	chd8	65	64.498

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000016406	chd9	74	63.091	ENSG00000177200	CHD9	91	80.000	Homo_sapiens
ENSMMOG00000016406	chd9	99	81.383	ENSAPOG00000023034	chd9	98	86.412	Acanthochromis_polyacanthus
ENSMMOG00000016406	chd9	99	80.646	ENSACIG00000004097	chd9	98	80.896	Amphilophus_citrinellus
ENSMMOG00000016406	chd9	99	81.140	ENSAOCG00000005487	chd9	98	86.590	Amphiprion_ocellaris
ENSMMOG00000016406	chd9	99	81.917	ENSAPEG00000009859	chd9	98	86.523	Amphiprion_percula
ENSMMOG00000016406	chd9	99	83.496	ENSATEG00000002748	chd9	99	83.706	Anabas_testudineus
ENSMMOG00000016406	chd9	74	63.441	ENSACAG00000016150	CHD9	55	76.248	Anolis_carolinensis
ENSMMOG00000016406	chd9	74	62.955	ENSANAG00000015630	CHD9	91	69.965	Aotus_nancymaae
ENSMMOG00000016406	chd9	99	81.136	ENSACLG00000016899	chd9	73	83.333	Astatotilapia_calliptera
ENSMMOG00000016406	chd9	97	70.025	ENSAMXG00000005652	chd9	98	75.993	Astyanax_mexicanus
ENSMMOG00000016406	chd9	74	63.000	ENSCJAG00000001573	CHD9	91	70.318	Callithrix_jacchus
ENSMMOG00000016406	chd9	74	63.229	ENSCAFG00020002879	CHD9	91	70.671	Canis_lupus_dingo
ENSMMOG00000016406	chd9	74	63.124	ENSTSYG00000007693	CHD9	91	70.671	Carlito_syrichta
ENSMMOG00000016406	chd9	77	60.976	ENSCAPG00000011604	CHD9	61	60.366	Cavia_aperea
ENSMMOG00000016406	chd9	74	59.509	ENSCPOG00000036544	CHD9	84	66.481	Cavia_porcellus
ENSMMOG00000016406	chd9	74	63.182	ENSCCAG00000036178	CHD9	91	71.025	Cebus_capucinus
ENSMMOG00000016406	chd9	74	63.039	ENSCATG00000036753	CHD9	91	71.025	Cercocebus_atys
ENSMMOG00000016406	chd9	74	63.034	ENSCLAG00000007137	CHD9	94	81.159	Chinchilla_lanigera
ENSMMOG00000016406	chd9	69	82.692	ENSCHOG00000003935	CHD9	53	90.314	Choloepus_hoffmanni
ENSMMOG00000016406	chd9	90	82.671	ENSCPBG00000012459	CHD9	84	79.537	Chrysemys_picta_bellii
ENSMMOG00000016406	chd9	74	62.981	ENSCANG00000030349	CHD9	91	71.025	Colobus_angolensis_palliatus
ENSMMOG00000016406	chd9	74	63.012	ENSCGRG00000012850	Chd9	95	80.499	Cricetulus_griseus_crigri
ENSMMOG00000016406	chd9	94	77.695	ENSCSEG00000009209	chd9	97	81.826	Cynoglossus_semilaevis
ENSMMOG00000016406	chd9	97	78.440	ENSCVAG00000016195	chd9	99	76.630	Cyprinodon_variegatus
ENSMMOG00000016406	chd9	57	81.360	ENSDARG00000074498	chd9	97	75.710	Danio_rerio
ENSMMOG00000016406	chd9	56	75.901	ENSDNOG00000006045	CHD9	93	70.963	Dasypus_novemcinctus
ENSMMOG00000016406	chd9	76	92.063	ENSETEG00000009565	CHD9	76	92.063	Echinops_telfairi
ENSMMOG00000016406	chd9	88	78.264	ENSEASG00005014832	CHD9	96	78.474	Equus_asinus_asinus
ENSMMOG00000016406	chd9	74	63.003	ENSECAG00000011505	CHD9	60	74.150	Equus_caballus
ENSMMOG00000016406	chd9	59	86.344	ENSEEUG00000014515	CHD9	67	82.873	Erinaceus_europaeus
ENSMMOG00000016406	chd9	94	65.981	ENSELUG00000006031	chd9	90	67.526	Esox_lucius
ENSMMOG00000016406	chd9	74	63.822	ENSFCAG00000022534	CHD9	91	71.025	Felis_catus
ENSMMOG00000016406	chd9	58	75.595	ENSFALG00000013276	CHD9	67	76.239	Ficedula_albicollis
ENSMMOG00000016406	chd9	97	77.668	ENSFHEG00000006068	chd9	98	83.548	Fundulus_heteroclitus
ENSMMOG00000016406	chd9	68	85.811	ENSGMOG00000006040	chd9	83	85.122	Gadus_morhua
ENSMMOG00000016406	chd9	99	77.087	ENSGAFG00000010014	chd9	97	83.545	Gambusia_affinis
ENSMMOG00000016406	chd9	82	83.528	ENSGACG00000016694	chd9	68	90.227	Gasterosteus_aculeatus
ENSMMOG00000016406	chd9	74	63.055	ENSGGOG00000014816	CHD9	91	70.671	Gorilla_gorilla
ENSMMOG00000016406	chd9	99	82.022	ENSHBUG00000023322	chd9	98	85.223	Haplochromis_burtoni
ENSMMOG00000016406	chd9	74	63.032	ENSHGLG00000014938	CHD9	94	80.723	Heterocephalus_glaber_female
ENSMMOG00000016406	chd9	97	75.672	ENSHCOG00000000937	chd9	96	81.049	Hippocampus_comes
ENSMMOG00000016406	chd9	83	76.868	ENSIPUG00000016448	chd9	97	81.139	Ictalurus_punctatus
ENSMMOG00000016406	chd9	74	63.344	ENSSTOG00000022273	CHD9	95	80.071	Ictidomys_tridecemlineatus
ENSMMOG00000016406	chd9	97	78.713	ENSKMAG00000016784	chd9	97	84.530	Kryptolebias_marmoratus
ENSMMOG00000016406	chd9	94	81.750	ENSLBEG00000012077	chd9	98	85.466	Labrus_bergylta
ENSMMOG00000016406	chd9	97	58.483	ENSLACG00000005557	CHD9	80	65.612	Latimeria_chalumnae
ENSMMOG00000016406	chd9	89	73.525	ENSLOCG00000007225	chd9	97	73.613	Lepisosteus_oculatus
ENSMMOG00000016406	chd9	74	63.117	ENSMFAG00000041354	CHD9	91	71.025	Macaca_fascicularis
ENSMMOG00000016406	chd9	74	63.117	ENSMMUG00000016310	CHD9	91	71.025	Macaca_mulatta
ENSMMOG00000016406	chd9	74	63.072	ENSMLEG00000043219	CHD9	91	71.025	Mandrillus_leucophaeus
ENSMMOG00000016406	chd9	99	82.483	ENSMAMG00000003909	chd9	99	81.604	Mastacembelus_armatus
ENSMMOG00000016406	chd9	99	79.667	ENSMZEG00005006581	chd9	97	85.697	Maylandia_zebra
ENSMMOG00000016406	chd9	95	58.609	ENSMGAG00000004642	CHD9	58	71.810	Meleagris_gallopavo
ENSMMOG00000016406	chd9	74	62.869	ENSMICG00000016679	CHD9	91	71.025	Microcebus_murinus
ENSMMOG00000016406	chd9	73	65.644	ENSMODG00000013142	-	95	77.452	Monodelphis_domestica
ENSMMOG00000016406	chd9	99	80.946	ENSMALG00000013306	chd9	99	81.186	Monopterus_albus
ENSMMOG00000016406	chd9	74	62.653	MGP_CAROLIEiJ_G0031364	Chd9	85	69.619	Mus_caroli
ENSMMOG00000016406	chd9	74	62.483	ENSMUSG00000056608	Chd9	95	79.527	Mus_musculus
ENSMMOG00000016406	chd9	94	62.874	MGP_PahariEiJ_G0022964	Chd9	84	68.801	Mus_pahari
ENSMMOG00000016406	chd9	74	62.409	MGP_SPRETEiJ_G0032483	Chd9	85	69.148	Mus_spretus
ENSMMOG00000016406	chd9	99	81.787	ENSNBRG00000009423	chd9	66	91.469	Neolamprologus_brichardi
ENSMMOG00000016406	chd9	64	91.083	ENSMEUG00000008222	-	74	91.083	Notamacropus_eugenii
ENSMMOG00000016406	chd9	58	85.915	ENSOPRG00000011168	CHD9	70	85.915	Ochotona_princeps
ENSMMOG00000016406	chd9	83	86.394	ENSONIG00000002816	chd9	98	84.940	Oreochromis_niloticus
ENSMMOG00000016406	chd9	59	73.666	ENSOCUG00000001016	CHD9	95	70.177	Oryctolagus_cuniculus
ENSMMOG00000016406	chd9	97	76.698	ENSORLG00000013810	chd9	94	84.596	Oryzias_latipes
ENSMMOG00000016406	chd9	97	78.498	ENSORLG00020020665	chd9	96	78.026	Oryzias_latipes_hni
ENSMMOG00000016406	chd9	97	76.339	ENSORLG00015019126	chd9	94	84.005	Oryzias_latipes_hsok
ENSMMOG00000016406	chd9	64	79.656	ENSOMEG00000015978	chd9	99	79.817	Oryzias_melastigma
ENSMMOG00000016406	chd9	57	74.909	ENSPPAG00000039388	-	67	74.970	Pan_paniscus
ENSMMOG00000016406	chd9	74	63.777	ENSPPRG00000004801	CHD9	91	70.671	Panthera_pardus
ENSMMOG00000016406	chd9	74	62.642	ENSPTIG00000021854	CHD9	91	62.191	Panthera_tigris_altaica
ENSMMOG00000016406	chd9	74	63.045	ENSPTRG00000008113	CHD9	91	70.671	Pan_troglodytes
ENSMMOG00000016406	chd9	74	63.027	ENSPANG00000019307	CHD9	91	71.025	Papio_anubis
ENSMMOG00000016406	chd9	95	64.936	ENSPKIG00000025401	-	91	66.536	Paramormyrops_kingsleyae
ENSMMOG00000016406	chd9	95	74.025	ENSPKIG00000021876	chd9	97	74.410	Paramormyrops_kingsleyae
ENSMMOG00000016406	chd9	64	63.920	ENSPSIG00000008099	CHD9	71	77.688	Pelodiscus_sinensis
ENSMMOG00000016406	chd9	88	62.160	ENSPCIG00000017215	CHD9	98	72.495	Phascolarctos_cinereus
ENSMMOG00000016406	chd9	97	78.255	ENSPLAG00000011118	chd9	97	85.101	Poecilia_latipinna
ENSMMOG00000016406	chd9	74	79.262	ENSPMEG00000015106	chd9	99	78.623	Poecilia_mexicana
ENSMMOG00000016406	chd9	97	79.371	ENSPREG00000006473	chd9	97	83.695	Poecilia_reticulata
ENSMMOG00000016406	chd9	73	80.759	ENSPCAG00000007564	CHD9	74	80.816	Procavia_capensis
ENSMMOG00000016406	chd9	74	60.998	ENSPCOG00000028433	CHD9	91	69.965	Propithecus_coquereli
ENSMMOG00000016406	chd9	84	58.583	ENSPVAG00000015617	CHD9	82	73.113	Pteropus_vampyrus
ENSMMOG00000016406	chd9	99	80.975	ENSPNYG00000010947	chd9	97	84.918	Pundamilia_nyererei
ENSMMOG00000016406	chd9	99	68.808	ENSPNAG00000024141	chd9	98	76.543	Pygocentrus_nattereri
ENSMMOG00000016406	chd9	74	60.692	ENSRNOG00000049302	Chd9	76	81.109	Rattus_norvegicus
ENSMMOG00000016406	chd9	58	74.538	ENSRBIG00000035553	CHD9	96	68.320	Rhinopithecus_bieti
ENSMMOG00000016406	chd9	58	75.408	ENSRROG00000033278	CHD9	91	71.025	Rhinopithecus_roxellana
ENSMMOG00000016406	chd9	74	62.778	ENSSBOG00000030240	CHD9	91	70.318	Saimiri_boliviensis_boliviensis
ENSMMOG00000016406	chd9	74	63.435	ENSSHAG00000002719	CHD9	80	70.013	Sarcophilus_harrisii
ENSMMOG00000016406	chd9	91	68.153	ENSSFOG00015001327	chd9	95	73.353	Scleropages_formosus
ENSMMOG00000016406	chd9	97	68.732	ENSSFOG00015020209	chd9	98	75.227	Scleropages_formosus
ENSMMOG00000016406	chd9	92	83.004	ENSSMAG00000008953	chd9	97	86.194	Scophthalmus_maximus
ENSMMOG00000016406	chd9	99	83.966	ENSSDUG00000006139	chd9	97	87.526	Seriola_dumerili
ENSMMOG00000016406	chd9	99	84.312	ENSSLDG00000017818	chd9	97	87.623	Seriola_lalandi_dorsalis
ENSMMOG00000016406	chd9	99	83.274	ENSSPAG00000021649	chd9	98	86.667	Stegastes_partitus
ENSMMOG00000016406	chd9	74	64.060	ENSTGUG00000007476	CHD9	67	76.133	Taeniopygia_guttata
ENSMMOG00000016406	chd9	99	81.362	ENSTRUG00000009125	chd9	99	81.481	Takifugu_rubripes
ENSMMOG00000016406	chd9	57	85.981	ENSTNIG00000003825	chd9	87	85.981	Tetraodon_nigroviridis
ENSMMOG00000016406	chd9	53	94.915	ENSTBEG00000016052	-	63	94.915	Tupaia_belangeri
ENSMMOG00000016406	chd9	67	86.164	ENSUMAG00000004043	CHD9	92	86.164	Ursus_maritimus
ENSMMOG00000016406	chd9	97	60.254	ENSXETG00000000349	chd9	78	75.811	Xenopus_tropicalis
ENSMMOG00000016406	chd9	81	86.917	ENSXCOG00000012997	chd9	97	85.786	Xiphophorus_couchianus
ENSMMOG00000016406	chd9	97	78.863	ENSXMAG00000016192	chd9	99	84.258	Xiphophorus_maculatus