EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000016530 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding fox-1 homolog 1%2C like
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 12203 bases
Position: chrKV751362.1:2780413-2792615
Accession: ZDB-GENE-040923-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000021748	Fox-1_C	PF12414.8	4.7e-35	1	1
ENSMMOP00000021748	RRM_1	PF00076.22	8.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000022109	-	1137	-	ENSMMOP00000021748	378 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000016530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000016530's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000016530	rbfox1l	89	51.515	ENSMMOG00000020193	rbfox3b	93	49.326
ENSMMOG00000016530	rbfox1l	63	47.869	ENSMMOG00000008287	rbfox2	100	56.195
ENSMMOG00000016530	rbfox1l	79	53.488	ENSMMOG00000009716	rbfox1	81	53.488

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000016530	rbfox1l	97	87.332	ENSAPOG00000016304	rbfox1l	98	88.410	Acanthochromis_polyacanthus
ENSMMOG00000016530	rbfox1l	100	83.641	ENSACIG00000006441	rbfox1l	100	83.641	Amphilophus_citrinellus
ENSMMOG00000016530	rbfox1l	88	83.680	ENSAOCG00000020938	rbfox1l	99	83.086	Amphiprion_ocellaris
ENSMMOG00000016530	rbfox1l	100	87.990	ENSAPEG00000008232	rbfox1l	100	89.034	Amphiprion_percula
ENSMMOG00000016530	rbfox1l	100	88.127	ENSATEG00000022649	rbfox1l	100	88.127	Anabas_testudineus
ENSMMOG00000016530	rbfox1l	64	71.774	ENSACAG00000011931	-	91	71.371	Anolis_carolinensis
ENSMMOG00000016530	rbfox1l	100	88.512	ENSACLG00000021394	rbfox1l	100	88.512	Astatotilapia_calliptera
ENSMMOG00000016530	rbfox1l	100	86.126	ENSAMXG00000010470	rbfox1l	100	86.126	Astyanax_mexicanus
ENSMMOG00000016530	rbfox1l	100	55.065	ENSCPBG00000010944	-	100	59.067	Chrysemys_picta_bellii
ENSMMOG00000016530	rbfox1l	100	87.895	ENSCSEG00000018898	rbfox1l	100	88.158	Cynoglossus_semilaevis
ENSMMOG00000016530	rbfox1l	100	87.990	ENSCVAG00000007986	rbfox1l	100	87.467	Cyprinodon_variegatus
ENSMMOG00000016530	rbfox1l	100	84.817	ENSDARG00000021184	rbfox1l	100	85.079	Danio_rerio
ENSMMOG00000016530	rbfox1l	100	81.579	ENSELUG00000015077	rbfox1l	100	82.697	Esox_lucius
ENSMMOG00000016530	rbfox1l	79	95.122	ENSFHEG00000016557	rbfox1l	95	95.122	Fundulus_heteroclitus
ENSMMOG00000016530	rbfox1l	100	83.029	ENSGMOG00000005040	rbfox1l	100	83.029	Gadus_morhua
ENSMMOG00000016530	rbfox1l	92	85.593	ENSGAFG00000013211	rbfox1l	97	85.593	Gambusia_affinis
ENSMMOG00000016530	rbfox1l	100	88.773	ENSGACG00000010757	rbfox1l	100	88.773	Gasterosteus_aculeatus
ENSMMOG00000016530	rbfox1l	64	69.959	ENSGAGG00000012440	-	86	71.721	Gopherus_agassizii
ENSMMOG00000016530	rbfox1l	100	88.512	ENSHBUG00000013406	rbfox1l	100	88.512	Haplochromis_burtoni
ENSMMOG00000016530	rbfox1l	100	85.901	ENSHCOG00000020771	rbfox1l	100	86.162	Hippocampus_comes
ENSMMOG00000016530	rbfox1l	99	78.307	ENSIPUG00000000065	rbfox1l	99	79.379	Ictalurus_punctatus
ENSMMOG00000016530	rbfox1l	100	86.234	ENSKMAG00000005146	rbfox1l	100	87.273	Kryptolebias_marmoratus
ENSMMOG00000016530	rbfox1l	100	91.384	ENSLBEG00000017089	rbfox1l	100	91.384	Labrus_bergylta
ENSMMOG00000016530	rbfox1l	100	88.512	ENSMAMG00000019480	rbfox1l	100	88.512	Mastacembelus_armatus
ENSMMOG00000016530	rbfox1l	100	88.512	ENSMZEG00005016374	rbfox1l	100	88.512	Maylandia_zebra
ENSMMOG00000016530	rbfox1l	100	86.544	ENSMALG00000009384	rbfox1l	100	86.544	Monopterus_albus
ENSMMOG00000016530	rbfox1l	100	89.737	ENSNBRG00000003346	rbfox1l	100	89.737	Neolamprologus_brichardi
ENSMMOG00000016530	rbfox1l	100	89.034	ENSONIG00000012754	rbfox1l	100	89.034	Oreochromis_niloticus
ENSMMOG00000016530	rbfox1l	100	87.206	ENSORLG00000011269	rbfox1l	100	87.990	Oryzias_latipes
ENSMMOG00000016530	rbfox1l	100	87.990	ENSORLG00020000162	rbfox1l	100	88.773	Oryzias_latipes_hni
ENSMMOG00000016530	rbfox1l	100	87.467	ENSORLG00015013464	rbfox1l	100	88.251	Oryzias_latipes_hsok
ENSMMOG00000016530	rbfox1l	100	87.467	ENSOMEG00000010584	rbfox1l	100	88.251	Oryzias_melastigma
ENSMMOG00000016530	rbfox1l	100	86.579	ENSPKIG00000012029	rbfox1l	100	86.579	Paramormyrops_kingsleyae
ENSMMOG00000016530	rbfox1l	100	81.053	ENSPMGG00000012082	rbfox1l	100	80.263	Periophthalmus_magnuspinnatus
ENSMMOG00000016530	rbfox1l	100	87.206	ENSPFOG00000009338	rbfox1l	100	87.206	Poecilia_formosa
ENSMMOG00000016530	rbfox1l	85	77.676	ENSPLAG00000012816	rbfox1l	99	77.676	Poecilia_latipinna
ENSMMOG00000016530	rbfox1l	100	83.029	ENSPMEG00000017597	rbfox1l	100	83.029	Poecilia_mexicana
ENSMMOG00000016530	rbfox1l	100	83.290	ENSPREG00000007940	rbfox1l	100	83.290	Poecilia_reticulata
ENSMMOG00000016530	rbfox1l	100	88.251	ENSPNYG00000002098	rbfox1l	100	88.251	Pundamilia_nyererei
ENSMMOG00000016530	rbfox1l	100	83.290	ENSPNAG00000001620	rbfox1l	100	83.551	Pygocentrus_nattereri
ENSMMOG00000016530	rbfox1l	100	83.727	ENSSFOG00015000675	rbfox1l	100	83.990	Scleropages_formosus
ENSMMOG00000016530	rbfox1l	100	87.990	ENSSMAG00000013090	rbfox1l	100	87.990	Scophthalmus_maximus
ENSMMOG00000016530	rbfox1l	100	86.494	ENSSDUG00000008705	rbfox1l	100	88.312	Seriola_dumerili
ENSMMOG00000016530	rbfox1l	100	86.494	ENSSLDG00000022256	rbfox1l	100	88.312	Seriola_lalandi_dorsalis
ENSMMOG00000016530	rbfox1l	100	88.773	ENSSPAG00000016620	rbfox1l	100	89.817	Stegastes_partitus
ENSMMOG00000016530	rbfox1l	96	89.041	ENSTRUG00000015905	rbfox1l	100	89.041	Takifugu_rubripes
ENSMMOG00000016530	rbfox1l	64	85.227	ENSTNIG00000008088	rbfox1l	99	85.171	Tetraodon_nigroviridis
ENSMMOG00000016530	rbfox1l	100	86.684	ENSXMAG00000023471	rbfox1l	100	86.945	Xiphophorus_maculatus