EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000016972 (Gene tree)
Gene ID: -
Gene Symbol: prpf38a
Alias: fa04h11|fc83e08|wu:fa04h11|wu:fc83e08|zgc:92059
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 6750 bases
Position: chrKV751401.1:967937-974686
Accession: ZDB-GENE-040801-225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000022342	PRP38	PF03371.15	2.9e-63	1	1
ENSMMOP00000022338	PRP38	PF03371.15	3.9e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000022711	-	858	-	ENSMMOP00000022342	285 (aa)	-	-
ENSMMOT00000022707	-	915	-	ENSMMOP00000022338	304 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000016972's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000016972's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000016972	prpf38a	81	87.446	ENSG00000134748	PRPF38A	83	81.783	Homo_sapiens
ENSMMOG00000016972	prpf38a	84	90.805	ENSAPOG00000011652	prpf38a	100	89.389	Acanthochromis_polyacanthus
ENSMMOG00000016972	prpf38a	81	87.446	ENSAMEG00000009319	PRPF38A	83	81.783	Ailuropoda_melanoleuca
ENSMMOG00000016972	prpf38a	100	94.079	ENSACIG00000012292	prpf38a	84	90.661	Amphilophus_citrinellus
ENSMMOG00000016972	prpf38a	84	90.805	ENSAOCG00000018004	prpf38a	100	89.389	Amphiprion_ocellaris
ENSMMOG00000016972	prpf38a	84	90.805	ENSAPEG00000021414	prpf38a	100	89.389	Amphiprion_percula
ENSMMOG00000016972	prpf38a	78	94.118	ENSATEG00000004608	prpf38a	100	89.068	Anabas_testudineus
ENSMMOG00000016972	prpf38a	58	83.133	ENSAPLG00000005827	PRPF38A	78	76.166	Anas_platyrhynchos
ENSMMOG00000016972	prpf38a	81	85.714	ENSACAG00000008249	PRPF38A	83	79.845	Anolis_carolinensis
ENSMMOG00000016972	prpf38a	81	87.446	ENSANAG00000027839	PRPF38A	83	81.783	Aotus_nancymaae
ENSMMOG00000016972	prpf38a	100	59.425	ENSANAG00000029204	-	80	55.039	Aotus_nancymaae
ENSMMOG00000016972	prpf38a	78	94.570	ENSACLG00000021595	prpf38a	100	88.424	Astatotilapia_calliptera
ENSMMOG00000016972	prpf38a	78	95.475	ENSAMXG00000029274	prpf38a	81	89.804	Astyanax_mexicanus
ENSMMOG00000016972	prpf38a	89	84.170	ENSBTAG00000002720	PRPF38A	88	84.170	Bos_taurus
ENSMMOG00000016972	prpf38a	68	62.564	WBGene00008380	prp-38	69	59.009	Caenorhabditis_elegans
ENSMMOG00000016972	prpf38a	89	81.853	ENSCJAG00000021594	PRPF38A	87	81.467	Callithrix_jacchus
ENSMMOG00000016972	prpf38a	81	87.446	ENSCAFG00000003740	PRPF38A	83	81.783	Canis_familiaris
ENSMMOG00000016972	prpf38a	81	87.446	ENSCAFG00020010939	PRPF38A	83	81.783	Canis_lupus_dingo
ENSMMOG00000016972	prpf38a	81	87.446	ENSCHIG00000024730	PRPF38A	83	81.783	Capra_hircus
ENSMMOG00000016972	prpf38a	81	87.446	ENSTSYG00000009868	-	83	81.783	Carlito_syrichta
ENSMMOG00000016972	prpf38a	66	84.043	ENSTSYG00000031994	-	76	77.674	Carlito_syrichta
ENSMMOG00000016972	prpf38a	100	78.205	ENSCPOG00000005079	PRPF38A	83	84.766	Cavia_porcellus
ENSMMOG00000016972	prpf38a	81	87.446	ENSCCAG00000026502	PRPF38A	83	81.783	Cebus_capucinus
ENSMMOG00000016972	prpf38a	100	53.548	ENSCATG00000044190	-	64	57.767	Cercocebus_atys
ENSMMOG00000016972	prpf38a	81	87.446	ENSCATG00000032296	PRPF38A	83	81.783	Cercocebus_atys
ENSMMOG00000016972	prpf38a	81	87.446	ENSCLAG00000005816	PRPF38A	83	81.783	Chinchilla_lanigera
ENSMMOG00000016972	prpf38a	81	86.147	ENSCPBG00000014791	PRPF38A	83	80.620	Chrysemys_picta_bellii
ENSMMOG00000016972	prpf38a	81	68.398	ENSCSAVG00000009580	-	73	69.196	Ciona_savignyi
ENSMMOG00000016972	prpf38a	81	87.446	ENSCANG00000032608	PRPF38A	86	81.783	Colobus_angolensis_palliatus
ENSMMOG00000016972	prpf38a	81	87.446	ENSCGRG00001018502	-	83	81.783	Cricetulus_griseus_chok1gshd
ENSMMOG00000016972	prpf38a	85	71.154	ENSCGRG00001002557	-	76	75.000	Cricetulus_griseus_chok1gshd
ENSMMOG00000016972	prpf38a	81	87.446	ENSCGRG00000014868	Prpf38a	83	81.783	Cricetulus_griseus_crigri
ENSMMOG00000016972	prpf38a	78	93.213	ENSCSEG00000001269	prpf38a	87	90.551	Cynoglossus_semilaevis
ENSMMOG00000016972	prpf38a	78	95.475	ENSCVAG00000012305	prpf38a	100	89.389	Cyprinodon_variegatus
ENSMMOG00000016972	prpf38a	78	94.118	ENSDARG00000039213	prpf38a	81	88.627	Danio_rerio
ENSMMOG00000016972	prpf38a	81	87.446	ENSDNOG00000042326	PRPF38A	84	81.783	Dasypus_novemcinctus
ENSMMOG00000016972	prpf38a	74	96.875	ENSDORG00000023857	-	80	96.875	Dipodomys_ordii
ENSMMOG00000016972	prpf38a	91	75.285	ENSDORG00000025371	-	89	73.828	Dipodomys_ordii
ENSMMOG00000016972	prpf38a	91	75.285	ENSDORG00000023691	-	89	73.828	Dipodomys_ordii
ENSMMOG00000016972	prpf38a	74	69.668	FBgn0050342	Prp38	57	73.936	Drosophila_melanogaster
ENSMMOG00000016972	prpf38a	83	81.590	ENSEBUG00000012588	prpf38a	83	75.676	Eptatretus_burgeri
ENSMMOG00000016972	prpf38a	81	87.446	ENSEASG00005014427	PRPF38A	83	81.783	Equus_asinus_asinus
ENSMMOG00000016972	prpf38a	81	87.446	ENSECAG00000022628	PRPF38A	83	81.783	Equus_caballus
ENSMMOG00000016972	prpf38a	85	87.405	ENSELUG00000021094	prpf38a	100	87.781	Esox_lucius
ENSMMOG00000016972	prpf38a	81	87.446	ENSFCAG00000002518	PRPF38A	83	81.783	Felis_catus
ENSMMOG00000016972	prpf38a	67	83.684	ENSFALG00000005598	-	80	77.419	Ficedula_albicollis
ENSMMOG00000016972	prpf38a	99	73.052	ENSFALG00000003612	-	83	75.889	Ficedula_albicollis
ENSMMOG00000016972	prpf38a	100	78.135	ENSFDAG00000011287	PRPF38A	83	82.353	Fukomys_damarensis
ENSMMOG00000016972	prpf38a	85	88.168	ENSFHEG00000014317	prpf38a	88	88.550	Fundulus_heteroclitus
ENSMMOG00000016972	prpf38a	58	96.386	ENSGMOG00000011384	prpf38a	54	96.386	Gadus_morhua
ENSMMOG00000016972	prpf38a	100	74.522	ENSGALG00000010627	PRPF38A	83	81.008	Gallus_gallus
ENSMMOG00000016972	prpf38a	85	88.550	ENSGAFG00000012422	prpf38a	100	87.138	Gambusia_affinis
ENSMMOG00000016972	prpf38a	78	94.170	ENSGACG00000005423	prpf38a	83	88.760	Gasterosteus_aculeatus
ENSMMOG00000016972	prpf38a	81	86.147	ENSGAGG00000020547	PRPF38A	83	80.620	Gopherus_agassizii
ENSMMOG00000016972	prpf38a	81	87.446	ENSGGOG00000003940	PRPF38A	83	81.783	Gorilla_gorilla
ENSMMOG00000016972	prpf38a	66	95.767	ENSHBUG00000020572	prpf38a	80	95.745	Haplochromis_burtoni
ENSMMOG00000016972	prpf38a	81	87.446	ENSHGLG00000000475	PRPF38A	83	81.783	Heterocephalus_glaber_female
ENSMMOG00000016972	prpf38a	100	73.786	ENSHGLG00000007918	-	81	73.228	Heterocephalus_glaber_female
ENSMMOG00000016972	prpf38a	81	87.446	ENSHGLG00100008935	PRPF38A	83	81.783	Heterocephalus_glaber_male
ENSMMOG00000016972	prpf38a	100	73.786	ENSHGLG00100003928	-	81	73.228	Heterocephalus_glaber_male
ENSMMOG00000016972	prpf38a	64	93.956	ENSHCOG00000020781	prpf38a	70	83.111	Hippocampus_comes
ENSMMOG00000016972	prpf38a	81	91.379	ENSIPUG00000005757	prpf38a	82	85.547	Ictalurus_punctatus
ENSMMOG00000016972	prpf38a	81	87.446	ENSSTOG00000015610	PRPF38A	83	81.783	Ictidomys_tridecemlineatus
ENSMMOG00000016972	prpf38a	81	86.580	ENSJJAG00000015811	Prpf38a	83	81.008	Jaculus_jaculus
ENSMMOG00000016972	prpf38a	78	95.475	ENSKMAG00000006588	prpf38a	84	90.038	Kryptolebias_marmoratus
ENSMMOG00000016972	prpf38a	95	88.514	ENSLBEG00000020585	prpf38a	100	88.746	Labrus_bergylta
ENSMMOG00000016972	prpf38a	79	87.556	ENSLACG00000011495	PRPF38A	83	81.395	Latimeria_chalumnae
ENSMMOG00000016972	prpf38a	100	84.194	ENSLOCG00000006262	prpf38a	83	85.603	Lepisosteus_oculatus
ENSMMOG00000016972	prpf38a	81	87.446	ENSLAFG00000025862	PRPF38A	83	81.783	Loxodonta_africana
ENSMMOG00000016972	prpf38a	89	81.853	ENSMFAG00000039449	PRPF38A	87	81.467	Macaca_fascicularis
ENSMMOG00000016972	prpf38a	67	84.293	ENSMMUG00000014333	PRPF38A	78	77.982	Macaca_mulatta
ENSMMOG00000016972	prpf38a	100	53.226	ENSMNEG00000040242	-	65	57.971	Macaca_nemestrina
ENSMMOG00000016972	prpf38a	81	87.446	ENSMNEG00000031221	PRPF38A	83	81.783	Macaca_nemestrina
ENSMMOG00000016972	prpf38a	81	87.446	ENSMLEG00000041105	PRPF38A	83	81.783	Mandrillus_leucophaeus
ENSMMOG00000016972	prpf38a	78	95.475	ENSMAMG00000015431	prpf38a	100	89.389	Mastacembelus_armatus
ENSMMOG00000016972	prpf38a	78	94.570	ENSMZEG00005017838	prpf38a	100	88.424	Maylandia_zebra
ENSMMOG00000016972	prpf38a	81	86.580	ENSMGAG00000011176	PRPF38A	86	81.008	Meleagris_gallopavo
ENSMMOG00000016972	prpf38a	91	77.652	ENSMAUG00000018029	-	86	83.628	Mesocricetus_auratus
ENSMMOG00000016972	prpf38a	81	87.446	ENSMICG00000014193	PRPF38A	83	81.783	Microcebus_murinus
ENSMMOG00000016972	prpf38a	81	87.446	ENSMOCG00000013080	Prpf38a	83	81.783	Microtus_ochrogaster
ENSMMOG00000016972	prpf38a	81	84.483	ENSMODG00000000644	PRPF38A	83	79.151	Monodelphis_domestica
ENSMMOG00000016972	prpf38a	85	90.076	ENSMALG00000019363	prpf38a	97	89.711	Monopterus_albus
ENSMMOG00000016972	prpf38a	100	74.841	MGP_CAROLIEiJ_G0026269	Prpf38a	83	81.395	Mus_caroli
ENSMMOG00000016972	prpf38a	100	74.841	ENSMUSG00000063800	Prpf38a	83	81.395	Mus_musculus
ENSMMOG00000016972	prpf38a	100	74.841	MGP_PahariEiJ_G0028602	Prpf38a	83	81.395	Mus_pahari
ENSMMOG00000016972	prpf38a	81	87.013	MGP_SPRETEiJ_G0027238	Prpf38a	93	92.021	Mus_spretus
ENSMMOG00000016972	prpf38a	81	87.446	ENSMPUG00000006896	PRPF38A	83	81.783	Mustela_putorius_furo
ENSMMOG00000016972	prpf38a	100	77.419	ENSNGAG00000011884	Prpf38a	82	85.039	Nannospalax_galili
ENSMMOG00000016972	prpf38a	90	91.051	ENSNBRG00000004013	prpf38a	83	91.051	Neolamprologus_brichardi
ENSMMOG00000016972	prpf38a	73	86.538	ENSNLEG00000017999	PRPF38A	75	80.000	Nomascus_leucogenys
ENSMMOG00000016972	prpf38a	97	58.657	ENSNLEG00000012592	-	69	59.292	Nomascus_leucogenys
ENSMMOG00000016972	prpf38a	100	52.564	ENSNLEG00000033398	-	62	51.339	Nomascus_leucogenys
ENSMMOG00000016972	prpf38a	81	83.550	ENSMEUG00000003860	PRPF38A	83	78.295	Notamacropus_eugenii
ENSMMOG00000016972	prpf38a	80	87.719	ENSOPRG00000008985	PRPF38A	94	88.053	Ochotona_princeps
ENSMMOG00000016972	prpf38a	81	87.446	ENSODEG00000005869	PRPF38A	83	81.783	Octodon_degus
ENSMMOG00000016972	prpf38a	78	95.023	ENSONIG00000007816	prpf38a	100	88.746	Oreochromis_niloticus
ENSMMOG00000016972	prpf38a	100	47.302	ENSOANG00000009541	-	100	51.111	Ornithorhynchus_anatinus
ENSMMOG00000016972	prpf38a	81	87.446	ENSOCUG00000000963	PRPF38A	83	81.783	Oryctolagus_cuniculus
ENSMMOG00000016972	prpf38a	96	88.926	ENSORLG00000013485	prpf38a	90	89.764	Oryzias_latipes
ENSMMOG00000016972	prpf38a	96	88.926	ENSORLG00020002130	prpf38a	90	89.764	Oryzias_latipes_hni
ENSMMOG00000016972	prpf38a	96	88.591	ENSORLG00015021393	prpf38a	87	89.844	Oryzias_latipes_hsok
ENSMMOG00000016972	prpf38a	95	88.514	ENSOMEG00000016333	prpf38a	91	89.716	Oryzias_melastigma
ENSMMOG00000016972	prpf38a	81	87.446	ENSOGAG00000005423	PRPF38A	83	81.783	Otolemur_garnettii
ENSMMOG00000016972	prpf38a	81	87.446	ENSOARG00000005373	PRPF38A	83	81.783	Ovis_aries
ENSMMOG00000016972	prpf38a	100	67.093	ENSPPAG00000033867	-	69	69.643	Pan_paniscus
ENSMMOG00000016972	prpf38a	81	87.446	ENSPPAG00000030905	PRPF38A	83	81.783	Pan_paniscus
ENSMMOG00000016972	prpf38a	81	87.446	ENSPPRG00000013268	PRPF38A	83	81.783	Panthera_pardus
ENSMMOG00000016972	prpf38a	81	87.446	ENSPTIG00000015419	PRPF38A	83	81.783	Panthera_tigris_altaica
ENSMMOG00000016972	prpf38a	89	81.853	ENSPTRG00000000739	PRPF38A	87	81.467	Pan_troglodytes
ENSMMOG00000016972	prpf38a	81	87.446	ENSPANG00000015483	PRPF38A	83	81.783	Papio_anubis
ENSMMOG00000016972	prpf38a	100	86.774	ENSPKIG00000011439	prpf38a	100	88.065	Paramormyrops_kingsleyae
ENSMMOG00000016972	prpf38a	81	85.714	ENSPSIG00000017487	PRPF38A	83	80.233	Pelodiscus_sinensis
ENSMMOG00000016972	prpf38a	76	90.323	ENSPMGG00000021352	prpf38a	78	89.823	Periophthalmus_magnuspinnatus
ENSMMOG00000016972	prpf38a	81	87.446	ENSPEMG00000023277	-	83	81.783	Peromyscus_maniculatus_bairdii
ENSMMOG00000016972	prpf38a	100	75.159	ENSPEMG00000011212	-	82	74.615	Peromyscus_maniculatus_bairdii
ENSMMOG00000016972	prpf38a	81	84.052	ENSPCIG00000022369	-	83	78.764	Phascolarctos_cinereus
ENSMMOG00000016972	prpf38a	89	89.575	ENSPFOG00000004248	prpf38a	100	87.138	Poecilia_formosa
ENSMMOG00000016972	prpf38a	85	88.550	ENSPLAG00000010328	prpf38a	100	87.138	Poecilia_latipinna
ENSMMOG00000016972	prpf38a	85	88.550	ENSPMEG00000011804	prpf38a	99	88.274	Poecilia_mexicana
ENSMMOG00000016972	prpf38a	89	81.992	ENSPREG00000002835	prpf38a	58	95.745	Poecilia_reticulata
ENSMMOG00000016972	prpf38a	81	76.695	ENSPPYG00000001348	PRPF38A	83	72.243	Pongo_abelii
ENSMMOG00000016972	prpf38a	81	87.446	ENSPCAG00000013328	PRPF38A	83	81.783	Procavia_capensis
ENSMMOG00000016972	prpf38a	100	66.558	ENSPCOG00000020709	-	74	72.889	Propithecus_coquereli
ENSMMOG00000016972	prpf38a	81	87.446	ENSPCOG00000016387	-	83	81.783	Propithecus_coquereli
ENSMMOG00000016972	prpf38a	81	87.446	ENSPVAG00000009803	PRPF38A	83	81.783	Pteropus_vampyrus
ENSMMOG00000016972	prpf38a	78	94.570	ENSPNYG00000005571	prpf38a	100	88.424	Pundamilia_nyererei
ENSMMOG00000016972	prpf38a	78	94.118	ENSPNAG00000010399	prpf38a	81	88.627	Pygocentrus_nattereri
ENSMMOG00000016972	prpf38a	81	87.879	ENSRNOG00000009451	Prpf38a	83	82.171	Rattus_norvegicus
ENSMMOG00000016972	prpf38a	81	87.446	ENSRBIG00000036442	PRPF38A	86	81.783	Rhinopithecus_bieti
ENSMMOG00000016972	prpf38a	98	68.525	ENSRROG00000040003	-	74	71.681	Rhinopithecus_roxellana
ENSMMOG00000016972	prpf38a	81	87.446	ENSRROG00000032788	PRPF38A	83	81.783	Rhinopithecus_roxellana
ENSMMOG00000016972	prpf38a	100	52.564	ENSRROG00000034606	-	79	51.685	Rhinopithecus_roxellana
ENSMMOG00000016972	prpf38a	81	87.446	ENSSBOG00000019515	PRPF38A	83	81.783	Saimiri_boliviensis_boliviensis
ENSMMOG00000016972	prpf38a	66	81.053	ENSSHAG00000006906	-	80	75.115	Sarcophilus_harrisii
ENSMMOG00000016972	prpf38a	86	72.541	ENSSHAG00000006029	-	74	76.923	Sarcophilus_harrisii
ENSMMOG00000016972	prpf38a	100	82.258	ENSSFOG00015013572	prpf38a	83	84.436	Scleropages_formosus
ENSMMOG00000016972	prpf38a	85	89.695	ENSSMAG00000015379	prpf38a	100	88.387	Scophthalmus_maximus
ENSMMOG00000016972	prpf38a	100	94.534	ENSSDUG00000001324	prpf38a	100	94.534	Seriola_dumerili
ENSMMOG00000016972	prpf38a	100	94.534	ENSSLDG00000014803	prpf38a	100	94.534	Seriola_lalandi_dorsalis
ENSMMOG00000016972	prpf38a	59	97.674	ENSSARG00000014458	PRPF38A	83	61.240	Sorex_araneus
ENSMMOG00000016972	prpf38a	81	86.580	ENSSPUG00000013259	PRPF38A	83	82.558	Sphenodon_punctatus
ENSMMOG00000016972	prpf38a	100	82.566	ENSSPAG00000010449	prpf38a	100	82.566	Stegastes_partitus
ENSMMOG00000016972	prpf38a	81	87.446	ENSSSCG00000028288	PRPF38A	83	81.783	Sus_scrofa
ENSMMOG00000016972	prpf38a	81	81.385	ENSTGUG00000008995	PRPF38A	83	76.357	Taeniopygia_guttata
ENSMMOG00000016972	prpf38a	92	93.487	ENSTRUG00000003374	prpf38a	78	93.487	Takifugu_rubripes
ENSMMOG00000016972	prpf38a	84	90.114	ENSTNIG00000005533	prpf38a	100	93.291	Tetraodon_nigroviridis
ENSMMOG00000016972	prpf38a	81	87.446	ENSTBEG00000000725	PRPF38A	83	81.783	Tupaia_belangeri
ENSMMOG00000016972	prpf38a	81	87.446	ENSTTRG00000016139	PRPF38A	83	81.783	Tursiops_truncatus
ENSMMOG00000016972	prpf38a	81	87.446	ENSUAMG00000000625	PRPF38A	83	81.783	Ursus_americanus
ENSMMOG00000016972	prpf38a	81	87.446	ENSUMAG00000022674	PRPF38A	83	81.783	Ursus_maritimus
ENSMMOG00000016972	prpf38a	81	87.013	ENSVPAG00000000907	PRPF38A	83	81.395	Vicugna_pacos
ENSMMOG00000016972	prpf38a	81	87.446	ENSVVUG00000004475	PRPF38A	83	81.783	Vulpes_vulpes
ENSMMOG00000016972	prpf38a	78	86.878	ENSXETG00000008060	prpf38a	72	86.726	Xenopus_tropicalis
ENSMMOG00000016972	prpf38a	81	92.308	ENSXCOG00000007393	prpf38a	75	92.511	Xiphophorus_couchianus
ENSMMOG00000016972	prpf38a	85	88.550	ENSXMAG00000026143	prpf38a	100	87.138	Xiphophorus_maculatus