EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000017067 (Gene tree)
Gene ID: -
Gene Symbol: ppfibp1b
Alias: si:dkey-103i16.1
Full Name: PTPRF interacting protein%2C binding protein 1b (liprin beta 1)
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 22103 bases
Position: chrKV751367.1:976237-998339
Accession: ZDB-GENE-060503-47
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000022460	XendoU	PF09412.10	2.2e-100	1	1
ENSMMOP00000022463	XendoU	PF09412.10	3.2e-100	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000022834	-	978	-	ENSMMOP00000022463	325 (aa)	-	-
ENSMMOT00000022831	-	879	-	ENSMMOP00000022460	292 (aa)	-	-
ENSMMOT00000023145	-	2766	-	ENSMMOP00000022769	921 (aa)	-	-
ENSMMOT00000023147	-	2697	-	ENSMMOP00000022771	898 (aa)	-	-
ENSMMOT00000023155	-	969	-	ENSMMOP00000022779	322 (aa)	-	-
ENSMMOT00000023152	-	2508	-	ENSMMOP00000022776	835 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000017067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000017067's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000017067	ppfibp1b	96	65.480	ENSMMOG00000019409	si:dkey-222f8.3	98	64.685
ENSMMOG00000017067	ppfibp1b	96	48.239	ENSMMOG00000013778	endou2	98	48.239
ENSMMOG00000017067	ppfibp1b	73	36.406	ENSMMOG00000021853	endou	65	36.406

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000017067	ppfibp1b	96	83.274	ENSNBRG00000003489	ppfibp1b	100	82.818	Neolamprologus_brichardi
ENSMMOG00000017067	ppfibp1b	97	82.456	ENSPFOG00000016359	ppfibp1b	99	78.778	Poecilia_formosa
ENSMMOG00000017067	ppfibp1b	97	84.043	ENSXCOG00000020485	ppfibp1b	99	83.737	Xiphophorus_couchianus