EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000017199 (Gene tree)
Gene ID: -
Gene Symbol: smg5
Alias: zgc:113841
Full Name: SMG5 nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 18953 bases
Position: chrKV751342.1:936252-955204
Accession: ZDB-GENE-050913-144
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000022627	EST1	PF10374.9	2.6e-23	1	1
ENSMMOP00000022627	EST1_DNA_bind	PF10373.9	2.8e-27	1	1
ENSMMOP00000022627	PIN_4	PF13638.6	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000022998	-	3315	-	ENSMMOP00000022627	1104 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000017199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000017199's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000017199	smg5	99	59.445	ENSG00000198952	SMG5	99	58.897	Homo_sapiens
ENSMMOG00000017199	smg5	100	86.661	ENSAPOG00000019690	smg5	100	86.307	Acanthochromis_polyacanthus
ENSMMOG00000017199	smg5	98	58.106	ENSAMEG00000014458	SMG5	100	57.664	Ailuropoda_melanoleuca
ENSMMOG00000017199	smg5	100	81.312	ENSACIG00000001353	smg5	99	81.042	Amphilophus_citrinellus
ENSMMOG00000017199	smg5	100	87.057	ENSAOCG00000019483	smg5	100	86.348	Amphiprion_ocellaris
ENSMMOG00000017199	smg5	100	87.234	ENSAPEG00000022949	smg5	100	86.525	Amphiprion_percula
ENSMMOG00000017199	smg5	100	85.980	ENSATEG00000005348	smg5	100	85.803	Anabas_testudineus
ENSMMOG00000017199	smg5	98	61.197	ENSAPLG00000010263	SMG5	100	60.325	Anas_platyrhynchos
ENSMMOG00000017199	smg5	99	59.928	ENSANAG00000032899	SMG5	99	59.305	Aotus_nancymaae
ENSMMOG00000017199	smg5	100	84.969	ENSACLG00000009311	smg5	100	84.527	Astatotilapia_calliptera
ENSMMOG00000017199	smg5	100	76.246	ENSAMXG00000024616	smg5	100	76.732	Astyanax_mexicanus
ENSMMOG00000017199	smg5	91	43.897	ENSBTAG00000021747	-	87	45.747	Bos_taurus
ENSMMOG00000017199	smg5	99	59.569	ENSBTAG00000009435	SMG5	99	58.965	Bos_taurus
ENSMMOG00000017199	smg5	99	59.838	ENSCJAG00000005684	SMG5	99	59.305	Callithrix_jacchus
ENSMMOG00000017199	smg5	99	59.730	ENSCAFG00000016839	SMG5	99	58.183	Canis_familiaris
ENSMMOG00000017199	smg5	99	59.730	ENSCAFG00020006061	SMG5	99	58.183	Canis_lupus_dingo
ENSMMOG00000017199	smg5	99	59.030	ENSCHIG00000007709	SMG5	99	59.107	Capra_hircus
ENSMMOG00000017199	smg5	91	43.696	ENSCHIG00000006323	-	87	46.028	Capra_hircus
ENSMMOG00000017199	smg5	99	59.714	ENSTSYG00000004099	SMG5	99	58.876	Carlito_syrichta
ENSMMOG00000017199	smg5	97	44.331	ENSCAPG00000003631	SMG5	100	45.549	Cavia_aperea
ENSMMOG00000017199	smg5	99	60.538	ENSCPOG00000015696	SMG5	99	60.215	Cavia_porcellus
ENSMMOG00000017199	smg5	99	59.409	ENSCCAG00000027409	SMG5	99	59.127	Cebus_capucinus
ENSMMOG00000017199	smg5	99	59.821	ENSCATG00000030539	SMG5	99	59.216	Cercocebus_atys
ENSMMOG00000017199	smg5	99	60.000	ENSCLAG00000003983	SMG5	99	59.038	Chinchilla_lanigera
ENSMMOG00000017199	smg5	99	59.821	ENSCSAG00000002120	SMG5	99	59.216	Chlorocebus_sabaeus
ENSMMOG00000017199	smg5	50	71.841	ENSCHOG00000008741	-	57	71.841	Choloepus_hoffmanni
ENSMMOG00000017199	smg5	94	59.981	ENSCPBG00000025848	SMG5	100	60.360	Chrysemys_picta_bellii
ENSMMOG00000017199	smg5	75	35.910	ENSCING00000008706	-	84	35.910	Ciona_intestinalis
ENSMMOG00000017199	smg5	99	57.758	ENSCANG00000029208	SMG5	99	57.194	Colobus_angolensis_palliatus
ENSMMOG00000017199	smg5	99	60.000	ENSCGRG00001006336	Smg5	99	58.550	Cricetulus_griseus_chok1gshd
ENSMMOG00000017199	smg5	98	59.799	ENSCGRG00000005111	Smg5	100	58.288	Cricetulus_griseus_crigri
ENSMMOG00000017199	smg5	100	81.883	ENSCSEG00000014220	smg5	100	81.083	Cynoglossus_semilaevis
ENSMMOG00000017199	smg5	94	76.330	ENSCVAG00000000529	smg5	99	71.043	Cyprinodon_variegatus
ENSMMOG00000017199	smg5	100	74.911	ENSDARG00000041481	smg5	100	74.379	Danio_rerio
ENSMMOG00000017199	smg5	99	57.554	ENSDNOG00000000051	SMG5	99	57.053	Dasypus_novemcinctus
ENSMMOG00000017199	smg5	81	38.187	ENSDNOG00000039862	-	86	38.187	Dasypus_novemcinctus
ENSMMOG00000017199	smg5	99	60.340	ENSDORG00000010382	Smg5	99	59.409	Dipodomys_ordii
ENSMMOG00000017199	smg5	75	82.524	ENSETEG00000010336	SMG5	75	82.524	Echinops_telfairi
ENSMMOG00000017199	smg5	63	50.985	ENSEBUG00000003739	smg5	78	50.985	Eptatretus_burgeri
ENSMMOG00000017199	smg5	99	59.263	ENSEASG00005019122	SMG5	99	58.760	Equus_asinus_asinus
ENSMMOG00000017199	smg5	99	59.083	ENSECAG00000001389	SMG5	99	58.670	Equus_caballus
ENSMMOG00000017199	smg5	66	74.221	ENSEEUG00000012690	SMG5	75	74.221	Erinaceus_europaeus
ENSMMOG00000017199	smg5	100	78.483	ENSELUG00000012585	smg5	100	78.199	Esox_lucius
ENSMMOG00000017199	smg5	99	59.018	ENSFCAG00000011783	SMG5	99	58.341	Felis_catus
ENSMMOG00000017199	smg5	59	59.879	ENSFALG00000001166	-	96	58.974	Ficedula_albicollis
ENSMMOG00000017199	smg5	98	59.361	ENSFDAG00000017388	SMG5	100	58.807	Fukomys_damarensis
ENSMMOG00000017199	smg5	98	74.795	ENSFHEG00000013939	smg5	96	76.128	Fundulus_heteroclitus
ENSMMOG00000017199	smg5	100	73.160	ENSGMOG00000007310	smg5	100	74.607	Gadus_morhua
ENSMMOG00000017199	smg5	99	61.566	ENSGALG00000029918	-	99	60.606	Gallus_gallus
ENSMMOG00000017199	smg5	93	89.935	ENSGAFG00000021691	smg5	99	89.935	Gambusia_affinis
ENSMMOG00000017199	smg5	100	82.099	ENSGACG00000013142	smg5	100	82.275	Gasterosteus_aculeatus
ENSMMOG00000017199	smg5	99	61.717	ENSGAGG00000016131	SMG5	99	61.181	Gopherus_agassizii
ENSMMOG00000017199	smg5	99	59.748	ENSGGOG00000010932	SMG5	99	59.127	Gorilla_gorilla
ENSMMOG00000017199	smg5	100	85.133	ENSHBUG00000008654	smg5	100	84.867	Haplochromis_burtoni
ENSMMOG00000017199	smg5	99	58.997	ENSHGLG00000019152	SMG5	99	57.758	Heterocephalus_glaber_female
ENSMMOG00000017199	smg5	91	59.230	ENSHGLG00100015948	SMG5	99	57.806	Heterocephalus_glaber_male
ENSMMOG00000017199	smg5	93	64.286	ENSHCOG00000010229	smg5	93	80.430	Hippocampus_comes
ENSMMOG00000017199	smg5	100	74.778	ENSIPUG00000006624	Smg5	100	74.423	Ictalurus_punctatus
ENSMMOG00000017199	smg5	99	60.090	ENSSTOG00000001780	SMG5	99	58.713	Ictidomys_tridecemlineatus
ENSMMOG00000017199	smg5	99	60.018	ENSJJAG00000022763	Smg5	99	59.447	Jaculus_jaculus
ENSMMOG00000017199	smg5	100	83.791	ENSKMAG00000014586	smg5	100	83.614	Kryptolebias_marmoratus
ENSMMOG00000017199	smg5	100	85.258	ENSLBEG00000002145	smg5	100	85.169	Labrus_bergylta
ENSMMOG00000017199	smg5	99	56.720	ENSLACG00000010521	SMG5	99	56.183	Latimeria_chalumnae
ENSMMOG00000017199	smg5	99	58.940	ENSLAFG00000006241	SMG5	99	58.333	Loxodonta_africana
ENSMMOG00000017199	smg5	99	59.821	ENSMFAG00000045357	SMG5	99	59.216	Macaca_fascicularis
ENSMMOG00000017199	smg5	93	74.292	ENSMMUG00000000090	SMG5	99	59.216	Macaca_mulatta
ENSMMOG00000017199	smg5	99	59.731	ENSMNEG00000044425	SMG5	99	59.127	Macaca_nemestrina
ENSMMOG00000017199	smg5	99	54.960	ENSMLEG00000041192	SMG5	99	54.230	Mandrillus_leucophaeus
ENSMMOG00000017199	smg5	100	85.803	ENSMAMG00000010683	smg5	100	85.182	Mastacembelus_armatus
ENSMMOG00000017199	smg5	100	77.199	ENSMZEG00005015815	smg5	99	76.750	Maylandia_zebra
ENSMMOG00000017199	smg5	66	74.521	ENSMZEG00005016543	smg5	100	74.932	Maylandia_zebra
ENSMMOG00000017199	smg5	99	60.270	ENSMAUG00000010381	Smg5	99	58.818	Mesocricetus_auratus
ENSMMOG00000017199	smg5	99	59.730	ENSMICG00000002257	SMG5	99	58.571	Microcebus_murinus
ENSMMOG00000017199	smg5	99	59.406	ENSMOCG00000016590	Smg5	99	58.333	Microtus_ochrogaster
ENSMMOG00000017199	smg5	68	34.232	ENSMODG00000004735	-	86	34.232	Monodelphis_domestica
ENSMMOG00000017199	smg5	69	34.704	ENSMODG00000004511	-	77	35.476	Monodelphis_domestica
ENSMMOG00000017199	smg5	88	58.384	ENSMODG00000016901	SMG5	98	58.081	Monodelphis_domestica
ENSMMOG00000017199	smg5	71	34.398	ENSMODG00000004532	-	85	34.398	Monodelphis_domestica
ENSMMOG00000017199	smg5	71	33.163	ENSMODG00000010675	-	88	33.418	Monodelphis_domestica
ENSMMOG00000017199	smg5	100	84.698	ENSMALG00000010375	smg5	100	84.075	Monopterus_albus
ENSMMOG00000017199	smg5	99	60.541	MGP_CAROLIEiJ_G0025163	Smg5	100	80.447	Mus_caroli
ENSMMOG00000017199	smg5	99	60.323	ENSMUSG00000001415	Smg5	99	80.447	Mus_musculus
ENSMMOG00000017199	smg5	99	60.000	MGP_PahariEiJ_G0026606	Smg5	100	81.006	Mus_pahari
ENSMMOG00000017199	smg5	99	60.234	MGP_SPRETEiJ_G0026104	Smg5	100	80.447	Mus_spretus
ENSMMOG00000017199	smg5	94	58.286	ENSMPUG00000004546	SMG5	100	56.654	Mustela_putorius_furo
ENSMMOG00000017199	smg5	99	59.857	ENSMLUG00000008518	SMG5	99	58.781	Myotis_lucifugus
ENSMMOG00000017199	smg5	99	60.163	ENSNGAG00000020706	Smg5	99	59.319	Nannospalax_galili
ENSMMOG00000017199	smg5	78	47.030	ENSNGAG00000012101	-	85	47.277	Nannospalax_galili
ENSMMOG00000017199	smg5	97	74.077	ENSNBRG00000004332	smg5	97	73.562	Neolamprologus_brichardi
ENSMMOG00000017199	smg5	99	59.659	ENSNLEG00000012439	SMG5	99	59.127	Nomascus_leucogenys
ENSMMOG00000017199	smg5	99	58.892	ENSMEUG00000012834	SMG5	99	57.641	Notamacropus_eugenii
ENSMMOG00000017199	smg5	99	58.771	ENSOPRG00000009152	SMG5	99	58.787	Ochotona_princeps
ENSMMOG00000017199	smg5	99	59.569	ENSODEG00000012237	SMG5	99	59.038	Octodon_degus
ENSMMOG00000017199	smg5	100	85.044	ENSONIG00000008632	smg5	100	84.336	Oreochromis_niloticus
ENSMMOG00000017199	smg5	69	42.607	ENSOCUG00000023338	-	84	42.607	Oryctolagus_cuniculus
ENSMMOG00000017199	smg5	98	58.893	ENSOCUG00000012886	SMG5	100	59.054	Oryctolagus_cuniculus
ENSMMOG00000017199	smg5	100	79.344	ENSORLG00000016239	smg5	100	80.142	Oryzias_latipes
ENSMMOG00000017199	smg5	100	79.610	ENSORLG00020013127	smg5	100	79.876	Oryzias_latipes_hni
ENSMMOG00000017199	smg5	100	79.344	ENSORLG00015019014	smg5	100	79.787	Oryzias_latipes_hsok
ENSMMOG00000017199	smg5	84	79.092	ENSOMEG00000021330	smg5	94	81.068	Oryzias_melastigma
ENSMMOG00000017199	smg5	99	58.797	ENSOGAG00000004966	SMG5	99	58.363	Otolemur_garnettii
ENSMMOG00000017199	smg5	91	43.830	ENSOARG00000011963	-	87	46.119	Ovis_aries
ENSMMOG00000017199	smg5	99	58.940	ENSOARG00000005778	SMG5	99	59.107	Ovis_aries
ENSMMOG00000017199	smg5	99	59.266	ENSPPAG00000011996	SMG5	99	59.409	Pan_paniscus
ENSMMOG00000017199	smg5	98	58.439	ENSPPRG00000011901	SMG5	100	58.508	Panthera_pardus
ENSMMOG00000017199	smg5	97	56.239	ENSPTIG00000007892	SMG5	98	54.346	Panthera_tigris_altaica
ENSMMOG00000017199	smg5	87	73.446	ENSPTRG00000049282	-	86	73.446	Pan_troglodytes
ENSMMOG00000017199	smg5	99	59.266	ENSPTRG00000023925	SMG5	99	59.409	Pan_troglodytes
ENSMMOG00000017199	smg5	99	59.821	ENSPANG00000011201	SMG5	99	59.216	Papio_anubis
ENSMMOG00000017199	smg5	100	73.998	ENSPKIG00000009402	smg5	100	73.708	Paramormyrops_kingsleyae
ENSMMOG00000017199	smg5	98	61.440	ENSPSIG00000015198	SMG5	100	61.040	Pelodiscus_sinensis
ENSMMOG00000017199	smg5	100	70.740	ENSPMGG00000010465	smg5	100	70.133	Periophthalmus_magnuspinnatus
ENSMMOG00000017199	smg5	99	60.090	ENSPEMG00000001819	Smg5	99	58.692	Peromyscus_maniculatus_bairdii
ENSMMOG00000017199	smg5	85	58.374	ENSPMAG00000000410	smg5	99	44.947	Petromyzon_marinus
ENSMMOG00000017199	smg5	99	59.066	ENSPCIG00000018938	SMG5	99	58.528	Phascolarctos_cinereus
ENSMMOG00000017199	smg5	100	82.609	ENSPFOG00000010191	smg5	100	82.875	Poecilia_formosa
ENSMMOG00000017199	smg5	100	82.431	ENSPLAG00000009332	smg5	100	83.007	Poecilia_latipinna
ENSMMOG00000017199	smg5	100	82.697	ENSPMEG00000014105	smg5	100	82.964	Poecilia_mexicana
ENSMMOG00000017199	smg5	100	82.520	ENSPREG00000017713	smg5	100	83.185	Poecilia_reticulata
ENSMMOG00000017199	smg5	99	59.748	ENSPPYG00000000723	SMG5	99	59.127	Pongo_abelii
ENSMMOG00000017199	smg5	77	77.778	ENSPCAG00000008412	SMG5	79	77.778	Procavia_capensis
ENSMMOG00000017199	smg5	99	60.180	ENSPCOG00000004741	SMG5	99	58.908	Propithecus_coquereli
ENSMMOG00000017199	smg5	99	52.688	ENSPVAG00000016748	SMG5	99	52.650	Pteropus_vampyrus
ENSMMOG00000017199	smg5	100	84.921	ENSPNYG00000013397	smg5	100	84.656	Pundamilia_nyererei
ENSMMOG00000017199	smg5	100	75.267	ENSPNAG00000028363	smg5	100	75.712	Pygocentrus_nattereri
ENSMMOG00000017199	smg5	99	59.643	ENSRNOG00000019590	Smg5	99	58.818	Rattus_norvegicus
ENSMMOG00000017199	smg5	99	59.910	ENSRBIG00000027428	SMG5	99	59.305	Rhinopithecus_bieti
ENSMMOG00000017199	smg5	99	59.821	ENSRROG00000030035	SMG5	99	59.216	Rhinopithecus_roxellana
ENSMMOG00000017199	smg5	99	59.748	ENSSBOG00000033339	SMG5	99	59.216	Saimiri_boliviensis_boliviensis
ENSMMOG00000017199	smg5	78	36.743	ENSSHAG00000009572	-	81	38.971	Sarcophilus_harrisii
ENSMMOG00000017199	smg5	98	58.243	ENSSHAG00000014163	SMG5	100	57.790	Sarcophilus_harrisii
ENSMMOG00000017199	smg5	74	33.333	ENSSHAG00000000561	-	87	35.385	Sarcophilus_harrisii
ENSMMOG00000017199	smg5	52	35.036	ENSSHAG00000000935	-	82	35.036	Sarcophilus_harrisii
ENSMMOG00000017199	smg5	100	71.880	ENSSFOG00015024175	smg5	100	72.743	Scleropages_formosus
ENSMMOG00000017199	smg5	100	84.663	ENSSMAG00000013059	smg5	100	84.929	Scophthalmus_maximus
ENSMMOG00000017199	smg5	100	86.508	ENSSDUG00000007122	smg5	100	86.067	Seriola_dumerili
ENSMMOG00000017199	smg5	100	86.637	ENSSLDG00000011418	smg5	100	86.295	Seriola_lalandi_dorsalis
ENSMMOG00000017199	smg5	91	53.861	ENSSARG00000012484	SMG5	99	53.069	Sorex_araneus
ENSMMOG00000017199	smg5	94	59.142	ENSSPUG00000002260	SMG5	100	59.477	Sphenodon_punctatus
ENSMMOG00000017199	smg5	100	86.496	ENSSPAG00000014266	smg5	100	86.231	Stegastes_partitus
ENSMMOG00000017199	smg5	99	59.569	ENSSSCG00000006490	-	99	58.491	Sus_scrofa
ENSMMOG00000017199	smg5	99	45.504	ENSSSCG00000039308	-	99	45.617	Sus_scrofa
ENSMMOG00000017199	smg5	99	61.725	ENSTGUG00000003748	-	99	61.111	Taeniopygia_guttata
ENSMMOG00000017199	smg5	100	79.045	ENSTRUG00000012580	smg5	100	79.045	Takifugu_rubripes
ENSMMOG00000017199	smg5	100	78.081	ENSTNIG00000010303	smg5	100	77.993	Tetraodon_nigroviridis
ENSMMOG00000017199	smg5	52	76.847	ENSTBEG00000002777	SMG5	58	76.847	Tupaia_belangeri
ENSMMOG00000017199	smg5	99	55.925	ENSTTRG00000001401	SMG5	99	54.749	Tursiops_truncatus
ENSMMOG00000017199	smg5	99	58.401	ENSUAMG00000013721	SMG5	99	57.720	Ursus_americanus
ENSMMOG00000017199	smg5	99	55.435	ENSUMAG00000018041	SMG5	98	71.971	Ursus_maritimus
ENSMMOG00000017199	smg5	92	68.812	ENSVPAG00000009446	SMG5	99	51.005	Vicugna_pacos
ENSMMOG00000017199	smg5	99	59.856	ENSVVUG00000005887	SMG5	99	58.094	Vulpes_vulpes
ENSMMOG00000017199	smg5	79	52.834	ENSXETG00000033791	SMG5	99	52.381	Xenopus_tropicalis
ENSMMOG00000017199	smg5	91	90.811	ENSXCOG00000004379	smg5	99	91.758	Xiphophorus_couchianus
ENSMMOG00000017199	smg5	100	81.988	ENSXMAG00000013499	smg5	100	82.206	Xiphophorus_maculatus