EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMMOG00000018009 (Gene tree)
Gene ID
-
Gene Symbol
pabpc1b
Alias
-
Full Name
poly A binding protein%2C cytoplasmic 1 b
Gene Type
protein_coding
Species
Mola_mola
Status
putative
Strand
Plus strand
Length
7455 bases
Position
chrKV751318.1:6325066-6332520
Accession
ZDB-GENE-050308-1
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMMOP00000023663PABPPF00658.183.5e-3211
ENSMMOP00000023663RRM_5PF13893.69.9e-0711
ENSMMOP00000023663RRM_1PF00076.225e-8714
ENSMMOP00000023663RRM_1PF00076.225e-8724
ENSMMOP00000023663RRM_1PF00076.225e-8734
ENSMMOP00000023663RRM_1PF00076.225e-8744
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMMOT00000024057-1782-ENSMMOP00000023663593 (aa)--
Gene Model
Click here to download ENSMMOG00000018009's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000018009's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMMOG00000018009pabpc1b6034.667ENSMMOG00000017839rbm195934.667
ENSMMOG00000018009pabpc1b7330.108ENSMMOG00000008453tia1l8030.108
ENSMMOG00000018009pabpc1b6336.145ENSMMOG00000020264elavl48336.145
ENSMMOG00000018009pabpc1b6330.719ENSMMOG00000012154elavl38830.719
ENSMMOG00000018009pabpc1b6337.349ENSMMOG00000012031ELAVL29237.349
ENSMMOG00000018009pabpc1b5839.759ENSMMOG00000000550celf5a5639.759
ENSMMOG00000018009pabpc1b6040.278ENSMMOG00000017823-6440.278
ENSMMOG00000018009pabpc1b10087.458ENSMMOG00000018044pabpc1a10087.458
ENSMMOG00000018009pabpc1b9876.198ENSMMOG00000002363pabpc49876.364
ENSMMOG00000018009pabpc1b9870.748ENSMMOG00000020574-9087.692
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMMOG00000018009pabpc1b6280.102ENSG00000186288PABPC1L2A9880.102Homo_sapiens
ENSMMOG00000018009pabpc1b6280.102ENSG00000184388PABPC1L2B9880.102Homo_sapiens
ENSMMOG00000018009pabpc1b10084.772ENSAPOG00000015105pabpc1a10084.772Acanthochromis_polyacanthus
ENSMMOG00000018009pabpc1b10092.985ENSAPOG00000017776pabpc1b10092.822Acanthochromis_polyacanthus
ENSMMOG00000018009pabpc1b6380.102ENSAMEG00000019441-9880.102Ailuropoda_melanoleuca
ENSMMOG00000018009pabpc1b10084.929ENSACIG00000004685pabpc1a10084.929Amphilophus_citrinellus
ENSMMOG00000018009pabpc1b10090.530ENSACIG00000018366pabpc1b10090.369Amphilophus_citrinellus
ENSMMOG00000018009pabpc1b10090.063ENSAOCG00000019839pabpc1b10090.063Amphiprion_ocellaris
ENSMMOG00000018009pabpc1b10084.615ENSAOCG00000011656pabpc1a10084.615Amphiprion_ocellaris
ENSMMOG00000018009pabpc1b10090.063ENSAPEG00000010435pabpc1b10090.063Amphiprion_percula
ENSMMOG00000018009pabpc1b10084.615ENSAPEG00000006963pabpc1a10084.615Amphiprion_percula
ENSMMOG00000018009pabpc1b10088.365ENSATEG00000012917pabpc1b10088.679Anabas_testudineus
ENSMMOG00000018009pabpc1b10084.144ENSATEG00000024852pabpc1a10084.301Anabas_testudineus
ENSMMOG00000018009pabpc1b6280.102ENSANAG00000019429-9880.102Aotus_nancymaae
ENSMMOG00000018009pabpc1b6280.102ENSANAG00000019431-9880.102Aotus_nancymaae
ENSMMOG00000018009pabpc1b10088.328ENSACLG00000014335pabpc1b10088.170Astatotilapia_calliptera
ENSMMOG00000018009pabpc1b10085.243ENSACLG00000009399pabpc1a10085.086Astatotilapia_calliptera
ENSMMOG00000018009pabpc1b10088.031ENSAMXG00000008599pabpc1b10087.874Astyanax_mexicanus
ENSMMOG00000018009pabpc1b6379.024ENSBTAG00000050902-9879.024Bos_taurus
ENSMMOG00000018009pabpc1b6377.033ENSBTAG00000052491-9877.033Bos_taurus
ENSMMOG00000018009pabpc1b6280.102ENSCJAG00000041326-9880.102Callithrix_jacchus
ENSMMOG00000018009pabpc1b6379.024ENSCAFG00020002052-9879.024Canis_lupus_dingo
ENSMMOG00000018009pabpc1b6280.102ENSCHIG00000006283-9880.102Capra_hircus
ENSMMOG00000018009pabpc1b6280.102ENSCHIG00000011138-9880.102Capra_hircus
ENSMMOG00000018009pabpc1b6280.102ENSTSYG00000001775-9880.102Carlito_syrichta
ENSMMOG00000018009pabpc1b6379.592ENSCPOG00000009525-9879.592Cavia_porcellus
ENSMMOG00000018009pabpc1b6280.102ENSCCAG00000031524-9880.102Cebus_capucinus
ENSMMOG00000018009pabpc1b6280.102ENSCATG00000042826-9880.102Cercocebus_atys
ENSMMOG00000018009pabpc1b6280.102ENSCATG00000043125-9880.102Cercocebus_atys
ENSMMOG00000018009pabpc1b6277.551ENSCLAG00000017409-9877.551Chinchilla_lanigera
ENSMMOG00000018009pabpc1b6277.551ENSCLAG00000017412-9877.551Chinchilla_lanigera
ENSMMOG00000018009pabpc1b6380.102ENSCSAG00000000102-9880.102Chlorocebus_sabaeus
ENSMMOG00000018009pabpc1b6179.558ENSCGRG00001023387-9677.320Cricetulus_griseus_chok1gshd
ENSMMOG00000018009pabpc1b9985.215ENSCSEG00000013324pabpc1a9984.897Cynoglossus_semilaevis
ENSMMOG00000018009pabpc1b10085.782ENSCSEG00000015241-10085.624Cynoglossus_semilaevis
ENSMMOG00000018009pabpc1b10084.301ENSCVAG00000021872pabpc1a10084.301Cyprinodon_variegatus
ENSMMOG00000018009pabpc1b10086.457ENSCVAG00000005489pabpc1b10086.299Cyprinodon_variegatus
ENSMMOG00000018009pabpc1b10084.591ENSDARG00000017219pabpc1a10085.063Danio_rerio
ENSMMOG00000018009pabpc1b10086.142ENSDARG00000021140pabpc1b9994.326Danio_rerio
ENSMMOG00000018009pabpc1b6380.423ENSDNOG00000030926-9878.571Dasypus_novemcinctus
ENSMMOG00000018009pabpc1b6277.551ENSDORG00000011362-9877.551Dipodomys_ordii
ENSMMOG00000018009pabpc1b6378.641ENSEASG00005010399-9878.641Equus_asinus_asinus
ENSMMOG00000018009pabpc1b6378.641ENSECAG00000002620-9878.641Equus_caballus
ENSMMOG00000018009pabpc1b6375.510ENSEEUG00000008203-9875.510Erinaceus_europaeus
ENSMMOG00000018009pabpc1b6358.974ENSELUG00000005389-9858.974Esox_lucius
ENSMMOG00000018009pabpc1b10087.127ENSELUG00000015062-10087.127Esox_lucius
ENSMMOG00000018009pabpc1b9985.669ENSELUG00000003614pabpc1a10085.512Esox_lucius
ENSMMOG00000018009pabpc1b6280.102ENSFCAG00000039701-9880.102Felis_catus
ENSMMOG00000018009pabpc1b6379.592ENSFDAG00000005484-9879.592Fukomys_damarensis
ENSMMOG00000018009pabpc1b10083.830ENSFHEG00000018979pabpc1a10084.144Fundulus_heteroclitus
ENSMMOG00000018009pabpc1b10087.066ENSFHEG00000008186pabpc1b10087.382Fundulus_heteroclitus
ENSMMOG00000018009pabpc1b10080.093ENSGMOG00000002448-10080.093Gadus_morhua
ENSMMOG00000018009pabpc1b9982.817ENSGMOG00000013448pabpc1a10083.153Gadus_morhua
ENSMMOG00000018009pabpc1b10088.303ENSGAFG00000010193pabpc1b10088.486Gambusia_affinis
ENSMMOG00000018009pabpc1b10084.976ENSGAFG00000019750pabpc1a10084.976Gambusia_affinis
ENSMMOG00000018009pabpc1b10086.094ENSGACG00000003771pabpc1b10087.188Gasterosteus_aculeatus
ENSMMOG00000018009pabpc1b10084.929ENSGACG00000003572pabpc1a10084.929Gasterosteus_aculeatus
ENSMMOG00000018009pabpc1b6280.102ENSGGOG00000038606-9880.102Gorilla_gorilla
ENSMMOG00000018009pabpc1b6280.102ENSGGOG00000043933-9880.102Gorilla_gorilla
ENSMMOG00000018009pabpc1b10090.260ENSHBUG00000002075pabpc1b10090.097Haplochromis_burtoni
ENSMMOG00000018009pabpc1b10085.243ENSHBUG00000020487pabpc1a10085.086Haplochromis_burtoni
ENSMMOG00000018009pabpc1b6278.571ENSHGLG00000019668-9878.571Heterocephalus_glaber_female
ENSMMOG00000018009pabpc1b6278.571ENSHGLG00000019762-9878.571Heterocephalus_glaber_female
ENSMMOG00000018009pabpc1b6378.571ENSHGLG00100020854-9878.571Heterocephalus_glaber_male
ENSMMOG00000018009pabpc1b10083.830ENSHCOG00000013502pabpc1a10083.987Hippocampus_comes
ENSMMOG00000018009pabpc1b9872.222ENSHCOG00000003175pabpc1b9972.049Hippocampus_comes
ENSMMOG00000018009pabpc1b10083.123ENSIPUG00000008848pabpc1a10083.438Ictalurus_punctatus
ENSMMOG00000018009pabpc1b7654.412ENSIPUG00000018724-6854.412Ictalurus_punctatus
ENSMMOG00000018009pabpc1b10089.684ENSIPUG00000010791-10089.684Ictalurus_punctatus
ENSMMOG00000018009pabpc1b7556.502ENSIPUG00000021244-6056.502Ictalurus_punctatus
ENSMMOG00000018009pabpc1b6379.592ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSMMOG00000018009pabpc1b6379.592ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSMMOG00000018009pabpc1b6278.061ENSJJAG00000007037-9878.061Jaculus_jaculus
ENSMMOG00000018009pabpc1b10092.593ENSKMAG00000008049pabpc1b10092.593Kryptolebias_marmoratus
ENSMMOG00000018009pabpc1b10084.458ENSKMAG00000000605pabpc1a10084.458Kryptolebias_marmoratus
ENSMMOG00000018009pabpc1b10089.573ENSLBEG00000026845pabpc1b10089.415Labrus_bergylta
ENSMMOG00000018009pabpc1b10084.772ENSLBEG00000024002-10084.772Labrus_bergylta
ENSMMOG00000018009pabpc1b6379.487ENSLAFG00000023096-9879.487Loxodonta_africana
ENSMMOG00000018009pabpc1b6279.695ENSMFAG00000028878-9879.695Macaca_fascicularis
ENSMMOG00000018009pabpc1b6280.102ENSMMUG00000037681-9880.102Macaca_mulatta
ENSMMOG00000018009pabpc1b6280.102ENSMMUG00000009740-9880.102Macaca_mulatta
ENSMMOG00000018009pabpc1b6280.102ENSMMUG00000039929-9880.102Macaca_mulatta
ENSMMOG00000018009pabpc1b6280.102ENSMNEG00000037732-9880.102Macaca_nemestrina
ENSMMOG00000018009pabpc1b6280.102ENSMLEG00000027495-9880.102Mandrillus_leucophaeus
ENSMMOG00000018009pabpc1b10083.830ENSMAMG00000004502-10083.987Mastacembelus_armatus
ENSMMOG00000018009pabpc1b10089.920ENSMAMG00000014610pabpc1b10089.760Mastacembelus_armatus
ENSMMOG00000018009pabpc1b10088.328ENSMZEG00005026745pabpc1b10088.170Maylandia_zebra
ENSMMOG00000018009pabpc1b10085.243ENSMZEG00005025416pabpc1a10085.086Maylandia_zebra
ENSMMOG00000018009pabpc1b6280.102ENSMICG00000047642-9880.102Microcebus_murinus
ENSMMOG00000018009pabpc1b9964.070ENSMODG00000015024-9964.070Monodelphis_domestica
ENSMMOG00000018009pabpc1b9871.635ENSMODG00000013156-9871.474Monodelphis_domestica
ENSMMOG00000018009pabpc1b10090.268ENSMALG00000006066pabpc1b10090.101Monopterus_albus
ENSMMOG00000018009pabpc1b10089.430ENSMALG00000013020-10089.430Monopterus_albus
ENSMMOG00000018009pabpc1b6281.421ENSNGAG00000012688-9878.061Nannospalax_galili
ENSMMOG00000018009pabpc1b10085.086ENSNBRG00000003068-10085.086Neolamprologus_brichardi
ENSMMOG00000018009pabpc1b10093.624ENSNBRG00000013737pabpc1b10093.456Neolamprologus_brichardi
ENSMMOG00000018009pabpc1b6280.102ENSNLEG00000018128-9880.102Nomascus_leucogenys
ENSMMOG00000018009pabpc1b6279.082ENSODEG00000018540-9879.082Octodon_degus
ENSMMOG00000018009pabpc1b10088.170ENSONIG00000002717pabpc1b10088.013Oreochromis_niloticus
ENSMMOG00000018009pabpc1b10084.929ENSONIG00000006871-10085.086Oreochromis_niloticus
ENSMMOG00000018009pabpc1b6380.102ENSOCUG00000002565-9880.102Oryctolagus_cuniculus
ENSMMOG00000018009pabpc1b10081.171ENSORLG00000003008-10081.171Oryzias_latipes
ENSMMOG00000018009pabpc1b10083.359ENSORLG00000002691pabpc1a10083.673Oryzias_latipes
ENSMMOG00000018009pabpc1b10083.673ENSORLG00020022398pabpc1a10083.673Oryzias_latipes_hni
ENSMMOG00000018009pabpc1b10081.013ENSORLG00020022259-10081.013Oryzias_latipes_hni
ENSMMOG00000018009pabpc1b10083.359ENSORLG00015013633pabpc110083.673Oryzias_latipes_hsok
ENSMMOG00000018009pabpc1b10081.487ENSORLG00015010932-10081.487Oryzias_latipes_hsok
ENSMMOG00000018009pabpc1b9977.329ENSOMEG00000013627pabpc1b10077.680Oryzias_melastigma
ENSMMOG00000018009pabpc1b10083.673ENSOMEG00000020219pabpc1a10083.830Oryzias_melastigma
ENSMMOG00000018009pabpc1b6380.102ENSOGAG00000029513-9880.102Otolemur_garnettii
ENSMMOG00000018009pabpc1b6380.102ENSOGAG00000026047-9880.102Otolemur_garnettii
ENSMMOG00000018009pabpc1b6380.102ENSOARG00000005943-9880.102Ovis_aries
ENSMMOG00000018009pabpc1b6280.102ENSPPAG00000012920-9880.102Pan_paniscus
ENSMMOG00000018009pabpc1b6380.102ENSPPRG00000011804-9880.102Panthera_pardus
ENSMMOG00000018009pabpc1b6380.102ENSPPRG00000011809-9880.102Panthera_pardus
ENSMMOG00000018009pabpc1b6280.102ENSPTRG00000028252-9880.102Pan_troglodytes
ENSMMOG00000018009pabpc1b6280.102ENSPANG00000011549-9880.102Papio_anubis
ENSMMOG00000018009pabpc1b10088.189ENSPKIG00000005676pabpc1b10088.189Paramormyrops_kingsleyae
ENSMMOG00000018009pabpc1b7987.366ENSPMGG00000022487pabpc1a9290.562Periophthalmus_magnuspinnatus
ENSMMOG00000018009pabpc1b7592.584ENSPMGG00000023134-9792.584Periophthalmus_magnuspinnatus
ENSMMOG00000018009pabpc1b9868.971ENSPCIG00000016995-5468.328Phascolarctos_cinereus
ENSMMOG00000018009pabpc1b10087.697ENSPFOG00000005917pabpc1b10087.855Poecilia_formosa
ENSMMOG00000018009pabpc1b10081.356ENSPFOG00000010815pabpc1a10082.897Poecilia_formosa
ENSMMOG00000018009pabpc1b10084.144ENSPLAG00000004114pabpc1a10084.458Poecilia_latipinna
ENSMMOG00000018009pabpc1b10088.013ENSPLAG00000001388pabpc1b10088.170Poecilia_latipinna
ENSMMOG00000018009pabpc1b10084.144ENSPMEG00000001334pabpc1a10084.458Poecilia_mexicana
ENSMMOG00000018009pabpc1b10087.697ENSPMEG00000014399pabpc1b10087.855Poecilia_mexicana
ENSMMOG00000018009pabpc1b10088.197ENSPREG00000010911pabpc1b10088.197Poecilia_reticulata
ENSMMOG00000018009pabpc1b10088.177ENSPREG00000019595pabpc1a10088.342Poecilia_reticulata
ENSMMOG00000018009pabpc1b6380.102ENSPPYG00000020468-9880.102Pongo_abelii
ENSMMOG00000018009pabpc1b6380.102ENSPCAG00000005308-9880.102Procavia_capensis
ENSMMOG00000018009pabpc1b6279.592ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSMMOG00000018009pabpc1b6380.513ENSPVAG00000016117-9880.513Pteropus_vampyrus
ENSMMOG00000018009pabpc1b9987.671ENSPNYG00000005192pabpc1a10087.671Pundamilia_nyererei
ENSMMOG00000018009pabpc1b10090.260ENSPNYG00000012578pabpc1b10090.097Pundamilia_nyererei
ENSMMOG00000018009pabpc1b10086.772ENSPNAG00000024626pabpc1b10086.614Pygocentrus_nattereri
ENSMMOG00000018009pabpc1b10086.364ENSPNAG00000028408pabpc1a10086.364Pygocentrus_nattereri
ENSMMOG00000018009pabpc1b9974.913ENSRBIG00000028738-9972.789Rhinopithecus_bieti
ENSMMOG00000018009pabpc1b6280.102ENSRBIG00000027173-9880.102Rhinopithecus_bieti
ENSMMOG00000018009pabpc1b6280.102ENSRROG00000017404-9880.102Rhinopithecus_roxellana
ENSMMOG00000018009pabpc1b9761.514ENSSHAG00000000511-10061.514Sarcophilus_harrisii
ENSMMOG00000018009pabpc1b10087.855ENSSFOG00015002752-10087.697Scleropages_formosus
ENSMMOG00000018009pabpc1b10085.039ENSSFOG00015006662pabpc1a10085.512Scleropages_formosus
ENSMMOG00000018009pabpc1b6280.347ENSSFOG00015019668-6680.347Scleropages_formosus
ENSMMOG00000018009pabpc1b10088.486ENSSMAG00000006869pabpc1b10088.486Scophthalmus_maximus
ENSMMOG00000018009pabpc1b10084.144ENSSMAG00000010803pabpc1a10084.144Scophthalmus_maximus
ENSMMOG00000018009pabpc1b10088.679ENSSDUG00000011965pabpc1b10088.679Seriola_dumerili
ENSMMOG00000018009pabpc1b10084.772ENSSDUG00000006675pabpc1a10084.615Seriola_dumerili
ENSMMOG00000018009pabpc1b10084.772ENSSLDG00000011661pabpc1a10084.615Seriola_lalandi_dorsalis
ENSMMOG00000018009pabpc1b10089.185ENSSLDG00000014156pabpc1b10089.185Seriola_lalandi_dorsalis
ENSMMOG00000018009pabpc1b10084.458ENSSPAG00000014453-10084.458Stegastes_partitus
ENSMMOG00000018009pabpc1b10089.765ENSSPAG00000019265pabpc1b10089.765Stegastes_partitus
ENSMMOG00000018009pabpc1b6280.102ENSSSCG00000036336-9880.102Sus_scrofa
ENSMMOG00000018009pabpc1b6280.102ENSSSCG00000032167-9880.102Sus_scrofa
ENSMMOG00000018009pabpc1b10086.538ENSTRUG00000003767-10087.019Takifugu_rubripes
ENSMMOG00000018009pabpc1b10083.699ENSTRUG00000011577-10083.856Takifugu_rubripes
ENSMMOG00000018009pabpc1b10081.144ENSTNIG00000013307pabpc1a10081.607Tetraodon_nigroviridis
ENSMMOG00000018009pabpc1b10085.893ENSTNIG00000009153pabpc1b10085.737Tetraodon_nigroviridis
ENSMMOG00000018009pabpc1b6380.102ENSTTRG00000013181-9880.102Tursiops_truncatus
ENSMMOG00000018009pabpc1b6280.102ENSUAMG00000008089-9880.102Ursus_americanus
ENSMMOG00000018009pabpc1b6280.102ENSUMAG00000003364-9880.102Ursus_maritimus
ENSMMOG00000018009pabpc1b9653.234ENSUMAG00000023926-8966.851Ursus_maritimus
ENSMMOG00000018009pabpc1b6279.000ENSVVUG00000015892-9779.000Vulpes_vulpes
ENSMMOG00000018009pabpc1b9947.143ENSXETG00000015439-10047.143Xenopus_tropicalis
ENSMMOG00000018009pabpc1b10087.993ENSXCOG00000019901pabpc1b10087.993Xiphophorus_couchianus
ENSMMOG00000018009pabpc1b10088.870ENSXCOG00000017066pabpc1a10089.037Xiphophorus_couchianus
ENSMMOG00000018009pabpc1b10087.849ENSXMAG00000002555pabpc1a10088.013Xiphophorus_maculatus
ENSMMOG00000018009pabpc1b10088.170ENSXMAG00000003753pabpc1b10088.486Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us