EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000018032 (Gene tree)
Gene ID: -
Gene Symbol: sf3b4
Alias: chunp6902|fb36a04|wu:fb36a04
Full Name: splicing factor 3b%2C subunit 4
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 4619 bases
Position: chrKV751318.1:6352488-6357106
Accession: ZDB-GENE-020419-22
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000023684	RRM_1	PF00076.22	2.4e-39	1	2
ENSMMOP00000023684	RRM_1	PF00076.22	2.4e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000024080	-	1179	-	ENSMMOP00000023684	392 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000018032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000018032's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000018032	sf3b4	63	38.798	ENSMMOG00000018044	pabpc1a	68	38.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000018032	sf3b4	58	97.807	ENSG00000143368	SF3B4	100	96.842	Homo_sapiens
ENSMMOG00000018032	sf3b4	59	98.696	ENSAPOG00000017647	sf3b4	58	98.696	Acanthochromis_polyacanthus
ENSMMOG00000018032	sf3b4	58	97.807	ENSAMEG00000010073	SF3B4	54	97.826	Ailuropoda_melanoleuca
ENSMMOG00000018032	sf3b4	60	98.729	ENSAOCG00000019801	sf3b4	59	98.729	Amphiprion_ocellaris
ENSMMOG00000018032	sf3b4	60	98.729	ENSAPEG00000010365	sf3b4	59	98.729	Amphiprion_percula
ENSMMOG00000018032	sf3b4	59	98.696	ENSATEG00000012844	sf3b4	57	98.696	Anabas_testudineus
ENSMMOG00000018032	sf3b4	55	100.000	ENSACAG00000010019	SF3B4	55	99.127	Anolis_carolinensis
ENSMMOG00000018032	sf3b4	58	97.807	ENSANAG00000031025	SF3B4	54	97.826	Aotus_nancymaae
ENSMMOG00000018032	sf3b4	59	97.826	ENSAMXG00000008282	sf3b4	57	97.826	Astyanax_mexicanus
ENSMMOG00000018032	sf3b4	52	96.040	ENSBTAG00000012793	-	50	96.078	Bos_taurus
ENSMMOG00000018032	sf3b4	58	97.807	ENSBTAG00000012495	SF3B4	54	97.826	Bos_taurus
ENSMMOG00000018032	sf3b4	58	97.807	ENSCAFG00000011617	SF3B4	54	97.826	Canis_familiaris
ENSMMOG00000018032	sf3b4	58	97.807	ENSCAFG00020019775	SF3B4	54	97.826	Canis_lupus_dingo
ENSMMOG00000018032	sf3b4	58	97.807	ENSCHIG00000025663	-	54	97.826	Capra_hircus
ENSMMOG00000018032	sf3b4	64	65.737	ENSCHIG00000006654	-	50	74.627	Capra_hircus
ENSMMOG00000018032	sf3b4	58	97.807	ENSTSYG00000009295	SF3B4	54	97.826	Carlito_syrichta
ENSMMOG00000018032	sf3b4	58	97.807	ENSCPOG00000008267	SF3B4	54	97.826	Cavia_porcellus
ENSMMOG00000018032	sf3b4	58	96.930	ENSCCAG00000021751	-	52	96.957	Cebus_capucinus
ENSMMOG00000018032	sf3b4	58	97.807	ENSCATG00000033114	SF3B4	54	97.826	Cercocebus_atys
ENSMMOG00000018032	sf3b4	58	97.807	ENSCLAG00000015851	SF3B4	54	97.826	Chinchilla_lanigera
ENSMMOG00000018032	sf3b4	58	97.807	ENSCSAG00000018129	SF3B4	54	97.826	Chlorocebus_sabaeus
ENSMMOG00000018032	sf3b4	55	100.000	ENSCPBG00000008041	SF3B4	55	99.127	Chrysemys_picta_bellii
ENSMMOG00000018032	sf3b4	55	90.654	ENSCING00000002337	-	58	90.654	Ciona_intestinalis
ENSMMOG00000018032	sf3b4	53	91.429	ENSCSAVG00000007809	-	89	89.881	Ciona_savignyi
ENSMMOG00000018032	sf3b4	58	97.807	ENSCANG00000035579	SF3B4	54	97.826	Colobus_angolensis_palliatus
ENSMMOG00000018032	sf3b4	58	97.807	ENSCGRG00001003590	Sf3b4	54	97.826	Cricetulus_griseus_chok1gshd
ENSMMOG00000018032	sf3b4	58	97.807	ENSCGRG00000016914	Sf3b4	54	97.826	Cricetulus_griseus_crigri
ENSMMOG00000018032	sf3b4	59	98.696	ENSDARG00000018574	sf3b4	58	98.696	Danio_rerio
ENSMMOG00000018032	sf3b4	56	92.273	ENSDNOG00000048908	-	53	92.342	Dasypus_novemcinctus
ENSMMOG00000018032	sf3b4	58	81.579	ENSDNOG00000037231	-	50	87.245	Dasypus_novemcinctus
ENSMMOG00000018032	sf3b4	58	97.807	ENSDORG00000016366	Sf3b4	54	97.826	Dipodomys_ordii
ENSMMOG00000018032	sf3b4	58	97.807	ENSEASG00005001477	SF3B4	54	97.826	Equus_asinus_asinus
ENSMMOG00000018032	sf3b4	58	97.807	ENSECAG00000024737	SF3B4	54	97.826	Equus_caballus
ENSMMOG00000018032	sf3b4	60	99.153	ENSELUG00000012876	sf3b4	59	99.153	Esox_lucius
ENSMMOG00000018032	sf3b4	58	97.807	ENSFCAG00000010106	SF3B4	54	97.826	Felis_catus
ENSMMOG00000018032	sf3b4	58	97.807	ENSFDAG00000009286	SF3B4	54	97.826	Fukomys_damarensis
ENSMMOG00000018032	sf3b4	100	71.429	ENSGMOG00000002519	sf3b4	67	97.391	Gadus_morhua
ENSMMOG00000018032	sf3b4	55	100.000	ENSGALG00000013352	SF3B4	55	99.563	Gallus_gallus
ENSMMOG00000018032	sf3b4	67	95.094	ENSGAFG00000010181	sf3b4	76	88.963	Gambusia_affinis
ENSMMOG00000018032	sf3b4	61	99.160	ENSGACG00000003819	sf3b4	66	98.069	Gasterosteus_aculeatus
ENSMMOG00000018032	sf3b4	58	97.807	ENSGGOG00000004761	SF3B4	54	97.826	Gorilla_gorilla
ENSMMOG00000018032	sf3b4	76	71.947	ENSGGOG00000038845	-	55	88.318	Gorilla_gorilla
ENSMMOG00000018032	sf3b4	58	97.807	ENSHGLG00000012360	SF3B4	54	97.826	Heterocephalus_glaber_female
ENSMMOG00000018032	sf3b4	58	97.807	ENSHGLG00100008533	SF3B4	55	97.826	Heterocephalus_glaber_male
ENSMMOG00000018032	sf3b4	58	97.797	ENSHCOG00000003014	sf3b4	57	97.380	Hippocampus_comes
ENSMMOG00000018032	sf3b4	59	98.696	ENSIPUG00000012242	Sf3b4	58	98.696	Ictalurus_punctatus
ENSMMOG00000018032	sf3b4	58	97.807	ENSSTOG00000000684	-	54	97.826	Ictidomys_tridecemlineatus
ENSMMOG00000018032	sf3b4	57	71.111	ENSJJAG00000022500	Sf3b4	55	71.533	Jaculus_jaculus
ENSMMOG00000018032	sf3b4	59	99.142	ENSLBEG00000026818	sf3b4	65	98.456	Labrus_bergylta
ENSMMOG00000018032	sf3b4	58	97.807	ENSLACG00000004436	SF3B4	63	97.807	Latimeria_chalumnae
ENSMMOG00000018032	sf3b4	59	98.707	ENSLOCG00000009048	sf3b4	55	99.130	Lepisosteus_oculatus
ENSMMOG00000018032	sf3b4	58	97.807	ENSLAFG00000008531	SF3B4	54	97.826	Loxodonta_africana
ENSMMOG00000018032	sf3b4	92	62.295	ENSMFAG00000039067	-	58	79.263	Macaca_fascicularis
ENSMMOG00000018032	sf3b4	58	97.807	ENSMFAG00000042395	SF3B4	54	97.826	Macaca_fascicularis
ENSMMOG00000018032	sf3b4	58	97.807	ENSMMUG00000007256	SF3B4	54	97.826	Macaca_mulatta
ENSMMOG00000018032	sf3b4	58	97.807	ENSMNEG00000031839	SF3B4	54	97.826	Macaca_nemestrina
ENSMMOG00000018032	sf3b4	92	61.749	ENSMNEG00000031526	-	58	78.802	Macaca_nemestrina
ENSMMOG00000018032	sf3b4	58	97.807	ENSMLEG00000038667	SF3B4	54	97.826	Mandrillus_leucophaeus
ENSMMOG00000018032	sf3b4	58	97.807	ENSMAUG00000015266	Sf3b4	54	97.826	Mesocricetus_auratus
ENSMMOG00000018032	sf3b4	58	97.807	ENSMICG00000044961	SF3B4	54	97.826	Microcebus_murinus
ENSMMOG00000018032	sf3b4	58	97.807	ENSMOCG00000013658	-	54	97.826	Microtus_ochrogaster
ENSMMOG00000018032	sf3b4	58	97.807	ENSMODG00000018767	SF3B4	54	97.826	Monodelphis_domestica
ENSMMOG00000018032	sf3b4	58	99.119	ENSMALG00000006174	sf3b4	57	98.261	Monopterus_albus
ENSMMOG00000018032	sf3b4	58	97.807	MGP_CAROLIEiJ_G0025365	Sf3b4	54	97.826	Mus_caroli
ENSMMOG00000018032	sf3b4	58	97.807	ENSMUSG00000068856	Sf3b4	54	97.826	Mus_musculus
ENSMMOG00000018032	sf3b4	58	97.807	MGP_PahariEiJ_G0026809	Sf3b4	54	97.826	Mus_pahari
ENSMMOG00000018032	sf3b4	58	97.807	MGP_SPRETEiJ_G0026309	Sf3b4	54	97.826	Mus_spretus
ENSMMOG00000018032	sf3b4	58	97.807	ENSMPUG00000005563	SF3B4	54	97.826	Mustela_putorius_furo
ENSMMOG00000018032	sf3b4	58	97.807	ENSMLUG00000010789	SF3B4	54	97.391	Myotis_lucifugus
ENSMMOG00000018032	sf3b4	58	97.807	ENSNGAG00000016337	Sf3b4	54	97.826	Nannospalax_galili
ENSMMOG00000018032	sf3b4	99	48.592	ENSNLEG00000009693	-	99	48.592	Nomascus_leucogenys
ENSMMOG00000018032	sf3b4	96	65.404	ENSNLEG00000000537	-	58	88.261	Nomascus_leucogenys
ENSMMOG00000018032	sf3b4	58	80.786	ENSODEG00000003597	-	57	80.952	Octodon_degus
ENSMMOG00000018032	sf3b4	90	56.800	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSMMOG00000018032	sf3b4	60	96.624	ENSONIG00000002730	sf3b4	57	98.261	Oreochromis_niloticus
ENSMMOG00000018032	sf3b4	58	97.807	ENSOCUG00000004614	SF3B4	54	97.826	Oryctolagus_cuniculus
ENSMMOG00000018032	sf3b4	59	98.707	ENSORLG00000003062	sf3b4	59	98.696	Oryzias_latipes
ENSMMOG00000018032	sf3b4	59	98.707	ENSORLG00020000687	sf3b4	58	98.696	Oryzias_latipes_hni
ENSMMOG00000018032	sf3b4	59	98.707	ENSORLG00015010989	sf3b4	58	98.696	Oryzias_latipes_hsok
ENSMMOG00000018032	sf3b4	59	98.276	ENSOMEG00000013694	sf3b4	58	98.696	Oryzias_melastigma
ENSMMOG00000018032	sf3b4	58	97.807	ENSOGAG00000006265	SF3B4	54	97.826	Otolemur_garnettii
ENSMMOG00000018032	sf3b4	58	97.807	ENSOARG00000020718	-	54	97.826	Ovis_aries
ENSMMOG00000018032	sf3b4	63	78.543	ENSOARG00000007368	-	55	81.416	Ovis_aries
ENSMMOG00000018032	sf3b4	70	78.445	ENSPPAG00000030024	-	56	87.391	Pan_paniscus
ENSMMOG00000018032	sf3b4	58	97.807	ENSPPAG00000040904	SF3B4	54	97.826	Pan_paniscus
ENSMMOG00000018032	sf3b4	58	97.807	ENSPPRG00000007384	SF3B4	54	97.826	Panthera_pardus
ENSMMOG00000018032	sf3b4	58	97.807	ENSPTIG00000014530	SF3B4	54	97.826	Panthera_tigris_altaica
ENSMMOG00000018032	sf3b4	58	97.807	ENSPTRG00000001243	SF3B4	54	97.826	Pan_troglodytes
ENSMMOG00000018032	sf3b4	66	81.992	ENSPTRG00000049727	-	58	87.826	Pan_troglodytes
ENSMMOG00000018032	sf3b4	58	97.807	ENSPANG00000005126	SF3B4	54	97.826	Papio_anubis
ENSMMOG00000018032	sf3b4	60	98.718	ENSPKIG00000020669	sf3b4	61	99.130	Paramormyrops_kingsleyae
ENSMMOG00000018032	sf3b4	58	97.807	ENSPEMG00000017568	Sf3b4	54	97.826	Peromyscus_maniculatus_bairdii
ENSMMOG00000018032	sf3b4	58	97.807	ENSPCIG00000008765	SF3B4	54	97.826	Phascolarctos_cinereus
ENSMMOG00000018032	sf3b4	68	95.131	ENSPFOG00000005754	sf3b4	76	88.963	Poecilia_formosa
ENSMMOG00000018032	sf3b4	68	95.131	ENSPLAG00000001401	sf3b4	83	88.963	Poecilia_latipinna
ENSMMOG00000018032	sf3b4	69	94.139	ENSPREG00000011076	sf3b4	57	98.696	Poecilia_reticulata
ENSMMOG00000018032	sf3b4	53	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSMMOG00000018032	sf3b4	58	97.807	ENSPCOG00000015399	SF3B4	54	97.826	Propithecus_coquereli
ENSMMOG00000018032	sf3b4	58	97.807	ENSPVAG00000014171	SF3B4	54	97.826	Pteropus_vampyrus
ENSMMOG00000018032	sf3b4	59	98.261	ENSPNAG00000000686	sf3b4	59	98.261	Pygocentrus_nattereri
ENSMMOG00000018032	sf3b4	58	97.807	ENSRNOG00000021181	Sf3b4	54	97.826	Rattus_norvegicus
ENSMMOG00000018032	sf3b4	58	97.807	ENSRBIG00000043392	SF3B4	54	97.826	Rhinopithecus_bieti
ENSMMOG00000018032	sf3b4	58	97.807	ENSRROG00000029366	SF3B4	54	97.826	Rhinopithecus_roxellana
ENSMMOG00000018032	sf3b4	92	58.158	ENSRROG00000028213	-	56	74.324	Rhinopithecus_roxellana
ENSMMOG00000018032	sf3b4	58	97.368	ENSSBOG00000012310	-	54	97.391	Saimiri_boliviensis_boliviensis
ENSMMOG00000018032	sf3b4	58	92.982	ENSSHAG00000004043	SF3B4	54	92.857	Sarcophilus_harrisii
ENSMMOG00000018032	sf3b4	100	84.040	ENSSMAG00000006837	sf3b4	59	98.729	Scophthalmus_maximus
ENSMMOG00000018032	sf3b4	68	95.865	ENSSDUG00000012064	sf3b4	59	98.729	Seriola_dumerili
ENSMMOG00000018032	sf3b4	67	96.970	ENSSLDG00000014226	sf3b4	59	99.153	Seriola_lalandi_dorsalis
ENSMMOG00000018032	sf3b4	61	96.266	ENSSPUG00000001028	SF3B4	57	99.127	Sphenodon_punctatus
ENSMMOG00000018032	sf3b4	60	99.576	ENSSPAG00000019219	sf3b4	59	99.576	Stegastes_partitus
ENSMMOG00000018032	sf3b4	58	97.807	ENSSSCG00000006665	-	54	97.826	Sus_scrofa
ENSMMOG00000018032	sf3b4	78	56.230	ENSSSCG00000039440	-	56	63.913	Sus_scrofa
ENSMMOG00000018032	sf3b4	60	97.458	ENSTGUG00000004470	SF3B4	91	98.696	Taeniopygia_guttata
ENSMMOG00000018032	sf3b4	67	95.455	ENSTNIG00000009156	sf3b4	59	98.261	Tetraodon_nigroviridis
ENSMMOG00000018032	sf3b4	58	97.807	ENSTTRG00000005217	SF3B4	54	97.826	Tursiops_truncatus
ENSMMOG00000018032	sf3b4	58	97.807	ENSUAMG00000022468	SF3B4	54	97.826	Ursus_americanus
ENSMMOG00000018032	sf3b4	58	97.807	ENSUMAG00000003802	SF3B4	55	97.826	Ursus_maritimus
ENSMMOG00000018032	sf3b4	55	97.685	ENSVPAG00000008152	SF3B4	53	97.706	Vicugna_pacos
ENSMMOG00000018032	sf3b4	58	97.807	ENSVVUG00000007732	-	59	97.826	Vulpes_vulpes
ENSMMOG00000018032	sf3b4	59	93.133	ENSXETG00000011038	sf3b4	54	100.000	Xenopus_tropicalis