EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000018072 (Gene tree)
Gene ID: -
Gene Symbol: zgc:152968
Alias: -
Full Name: zgc:152968
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 10020 bases
Position: chrKV751322.1:1246264-1256283
Accession: ZDB-GENE-061013-448
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000023752	RNase_T	PF00929.24	5.5e-07	1	1
ENSMMOP00000023745	RNase_T	PF00929.24	2.2e-06	1	1
ENSMMOP00000023750	RNase_T	PF00929.24	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000024145	-	1239	-	ENSMMOP00000023748	412 (aa)	-	-
ENSMMOT00000024147	-	2880	-	ENSMMOP00000023750	959 (aa)	-	-
ENSMMOT00000024149	-	1323	-	ENSMMOP00000023752	440 (aa)	-	-
ENSMMOT00000024142	-	2346	-	ENSMMOP00000023745	781 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000018072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000018072's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000018072	zgc:152968	99	43.789	ENSMMOG00000006931	rexo1	50	38.413

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000018072	zgc:152968	88	78.304	ENSAPOG00000005095	zgc:152968	86	76.429	Acanthochromis_polyacanthus
ENSMMOG00000018072	zgc:152968	89	80.835	ENSACIG00000002527	zgc:152968	91	80.835	Amphilophus_citrinellus
ENSMMOG00000018072	zgc:152968	100	77.088	ENSAOCG00000018049	-	82	74.442	Amphiprion_ocellaris
ENSMMOG00000018072	zgc:152968	97	79.805	ENSAPEG00000012559	zgc:152968	89	79.805	Amphiprion_percula
ENSMMOG00000018072	zgc:152968	98	81.707	ENSACLG00000020524	-	91	79.612	Astatotilapia_calliptera
ENSMMOG00000018072	zgc:152968	87	78.608	ENSCVAG00000015400	zgc:152968	92	75.743	Cyprinodon_variegatus
ENSMMOG00000018072	zgc:152968	99	58.079	ENSDARG00000037002	zgc:152968	70	64.691	Danio_rerio
ENSMMOG00000018072	zgc:152968	96	70.531	ENSELUG00000014272	zgc:152968	83	70.531	Esox_lucius
ENSMMOG00000018072	zgc:152968	99	76.399	ENSFHEG00000003641	-	85	76.399	Fundulus_heteroclitus
ENSMMOG00000018072	zgc:152968	74	75.076	ENSGMOG00000017747	-	98	75.076	Gadus_morhua
ENSMMOG00000018072	zgc:152968	99	78.780	ENSGAFG00000016810	-	82	86.111	Gambusia_affinis
ENSMMOG00000018072	zgc:152968	95	81.152	ENSHBUG00000007524	-	82	81.152	Haplochromis_burtoni
ENSMMOG00000018072	zgc:152968	87	68.750	ENSIPUG00000004633	zgc:152968	99	47.092	Ictalurus_punctatus
ENSMMOG00000018072	zgc:152968	100	73.002	ENSLBEG00000026485	zgc:152968	99	52.994	Labrus_bergylta
ENSMMOG00000018072	zgc:152968	100	74.596	ENSMAMG00000005920	-	84	74.596	Mastacembelus_armatus
ENSMMOG00000018072	zgc:152968	98	81.463	ENSMZEG00005013783	-	91	79.268	Maylandia_zebra
ENSMMOG00000018072	zgc:152968	99	72.609	ENSMALG00000003536	-	97	56.480	Monopterus_albus
ENSMMOG00000018072	zgc:152968	99	81.951	ENSONIG00000016897	-	90	79.259	Oreochromis_niloticus
ENSMMOG00000018072	zgc:152968	100	72.906	ENSORLG00020012504	-	82	72.906	Oryzias_latipes_hni
ENSMMOG00000018072	zgc:152968	99	75.641	ENSOMEG00000008840	-	88	75.641	Oryzias_melastigma
ENSMMOG00000018072	zgc:152968	99	79.024	ENSPFOG00000006104	-	85	79.024	Poecilia_formosa
ENSMMOG00000018072	zgc:152968	99	78.973	ENSPLAG00000005034	-	91	76.134	Poecilia_latipinna
ENSMMOG00000018072	zgc:152968	99	79.268	ENSPMEG00000018012	-	85	79.268	Poecilia_mexicana
ENSMMOG00000018072	zgc:152968	94	75.795	ENSPREG00000007481	-	87	79.024	Poecilia_reticulata
ENSMMOG00000018072	zgc:152968	93	60.364	ENSSFOG00015023869	zgc:152968	51	85.714	Scleropages_formosus
ENSMMOG00000018072	zgc:152968	100	75.214	ENSSMAG00000008149	-	92	69.094	Scophthalmus_maximus
ENSMMOG00000018072	zgc:152968	94	82.238	ENSSDUG00000022323	-	97	62.133	Seriola_dumerili
ENSMMOG00000018072	zgc:152968	88	84.119	ENSSLDG00000018799	zgc:152968	96	62.012	Seriola_lalandi_dorsalis
ENSMMOG00000018072	zgc:152968	100	77.970	ENSSPAG00000007632	-	76	80.542	Stegastes_partitus
ENSMMOG00000018072	zgc:152968	99	81.995	ENSTRUG00000025441	zgc:152968	88	77.878	Takifugu_rubripes
ENSMMOG00000018072	zgc:152968	99	78.102	ENSXMAG00000026483	-	84	78.102	Xiphophorus_maculatus