EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMMOG00000018212 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3 (1 of many)
Alias
si:dkey-81b15.1|wu:fc32f10|zgc:101655
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Mola_mola
Status
putative
Strand
Minus strand
Length
8266 bases
Position
chrKV751387.1:1802561-1810826
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMMOP00000023941CPSF73-100_CPF11718.82.5e-3312
ENSMMOP00000023941CPSF73-100_CPF11718.82.5e-3322
ENSMMOP00000023941Beta-CaspPF10996.88.6e-3411
ENSMMOP00000023941Lactamase_BPF00753.275.4e-1511
ENSMMOP00000023941RMMBLPF07521.127.7e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMMOT00000024340CPSF3 (1 of many)-2011902-ENSMMOP00000023941633 (aa)--
Gene Model
Click here to download ENSMMOG00000018212's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000018212's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMMOG00000018212CPSF37577.857ENSMMOG00000011923CPSF38477.857
ENSMMOG00000018212CPSF36932.301ENSMMOG00000015040ints117332.301
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMMOG00000018212CPSF39882.326ENSG00000119203CPSF310099.265Homo_sapiens
ENSMMOG00000018212CPSF37496.146ENSAPOG00000012241CPSF38896.137Acanthochromis_polyacanthus
ENSMMOG00000018212CPSF39886.271ENSAPOG00000022087cpsf39985.593Acanthochromis_polyacanthus
ENSMMOG00000018212CPSF39882.481ENSAMEG00000008493CPSF39482.481Ailuropoda_melanoleuca
ENSMMOG00000018212CPSF39584.455ENSACIG00000009846cpsf39984.455Amphilophus_citrinellus
ENSMMOG00000018212CPSF39581.558ENSACIG00000023663CPSF39981.558Amphilophus_citrinellus
ENSMMOG00000018212CPSF39883.851ENSAOCG00000010077CPSF39983.633Amphiprion_ocellaris
ENSMMOG00000018212CPSF39886.427ENSAOCG00000022056cpsf39386.427Amphiprion_ocellaris
ENSMMOG00000018212CPSF39886.427ENSAPEG00000019526cpsf39985.531Amphiprion_percula
ENSMMOG00000018212CPSF39883.851ENSAPEG00000021167CPSF39982.524Amphiprion_percula
ENSMMOG00000018212CPSF39883.546ENSATEG00000014525CPSF39383.546Anabas_testudineus
ENSMMOG00000018212CPSF39886.760ENSATEG00000003959cpsf39986.107Anabas_testudineus
ENSMMOG00000018212CPSF39882.016ENSAPLG00000006941CPSF39482.016Anas_platyrhynchos
ENSMMOG00000018212CPSF39680.284ENSACAG00000001759CPSF39980.284Anolis_carolinensis
ENSMMOG00000018212CPSF39879.595ENSANAG00000031254CPSF39579.595Aotus_nancymaae
ENSMMOG00000018212CPSF39886.739ENSACLG00000014484cpsf39885.831Astatotilapia_calliptera
ENSMMOG00000018212CPSF39582.512ENSACLG00000018846CPSF39982.512Astatotilapia_calliptera
ENSMMOG00000018212CPSF39882.609ENSAMXG00000004786cpsf39982.496Astyanax_mexicanus
ENSMMOG00000018212CPSF39882.481ENSBTAG00000019735CPSF39482.481Bos_taurus
ENSMMOG00000018212CPSF38858.722WBGene00013460cpsf-38258.722Caenorhabditis_elegans
ENSMMOG00000018212CPSF39882.171ENSCJAG00000006276CPSF39582.171Callithrix_jacchus
ENSMMOG00000018212CPSF39882.481ENSCAFG00000003375CPSF39082.481Canis_familiaris
ENSMMOG00000018212CPSF38787.993ENSCAFG00020026799CPSF39087.993Canis_lupus_dingo
ENSMMOG00000018212CPSF39882.481ENSCHIG00000013973CPSF39482.481Capra_hircus
ENSMMOG00000018212CPSF39882.016ENSTSYG00000002967CPSF39482.016Carlito_syrichta
ENSMMOG00000018212CPSF39882.171ENSCAPG00000013851CPSF39782.171Cavia_aperea
ENSMMOG00000018212CPSF39882.171ENSCPOG00000011299CPSF39482.171Cavia_porcellus
ENSMMOG00000018212CPSF39882.171ENSCCAG00000036730CPSF39682.171Cebus_capucinus
ENSMMOG00000018212CPSF39881.804ENSCATG00000014770CPSF39388.419Cercocebus_atys
ENSMMOG00000018212CPSF39882.171ENSCLAG00000002727CPSF39482.171Chinchilla_lanigera
ENSMMOG00000018212CPSF39873.953ENSCSAG00000007125CPSF39473.953Chlorocebus_sabaeus
ENSMMOG00000018212CPSF37566.736ENSCHOG00000000180CPSF37266.736Choloepus_hoffmanni
ENSMMOG00000018212CPSF39882.171ENSCPBG00000014074CPSF39382.171Chrysemys_picta_bellii
ENSMMOG00000018212CPSF39864.915ENSCING00000007214-9364.915Ciona_intestinalis
ENSMMOG00000018212CPSF39875.274ENSCANG00000034435CPSF39475.274Colobus_angolensis_palliatus
ENSMMOG00000018212CPSF39882.016ENSCGRG00001013134Cpsf39482.016Cricetulus_griseus_chok1gshd
ENSMMOG00000018212CPSF39882.016ENSCGRG00000018319Cpsf39482.016Cricetulus_griseus_crigri
ENSMMOG00000018212CPSF39882.946ENSCSEG00000002021CPSF39982.946Cynoglossus_semilaevis
ENSMMOG00000018212CPSF39882.764ENSCVAG00000015067CPSF39382.764Cyprinodon_variegatus
ENSMMOG00000018212CPSF39882.609ENSDARG00000027649cpsf39382.609Danio_rerio
ENSMMOG00000018212CPSF39881.269ENSDNOG00000008940CPSF39081.269Dasypus_novemcinctus
ENSMMOG00000018212CPSF39483.388ENSDORG00000014263Cpsf39483.388Dipodomys_ordii
ENSMMOG00000018212CPSF39864.531FBgn0261065Cpsf739464.688Drosophila_melanogaster
ENSMMOG00000018212CPSF39474.062ENSETEG00000003893CPSF39474.062Echinops_telfairi
ENSMMOG00000018212CPSF39872.741ENSEBUG00000009018cpsf39372.741Eptatretus_burgeri
ENSMMOG00000018212CPSF39882.481ENSEASG00005003970CPSF39482.481Equus_asinus_asinus
ENSMMOG00000018212CPSF39882.481ENSECAG00000019911CPSF39187.835Equus_caballus
ENSMMOG00000018212CPSF39867.442ENSEEUG00000015422CPSF39467.442Erinaceus_europaeus
ENSMMOG00000018212CPSF39884.496ENSELUG00000013775cpsf39982.962Esox_lucius
ENSMMOG00000018212CPSF39882.481ENSFCAG00000007852CPSF39982.481Felis_catus
ENSMMOG00000018212CPSF39882.326ENSFALG00000006572CPSF39982.326Ficedula_albicollis
ENSMMOG00000018212CPSF39881.481ENSFDAG00000006317CPSF39481.481Fukomys_damarensis
ENSMMOG00000018212CPSF39886.922ENSFHEG00000014774cpsf39386.922Fundulus_heteroclitus
ENSMMOG00000018212CPSF36061.029ENSFHEG00000012186CPSF39961.029Fundulus_heteroclitus
ENSMMOG00000018212CPSF39884.603ENSGMOG00000003157cpsf39384.603Gadus_morhua
ENSMMOG00000018212CPSF39881.860ENSGALG00000016424CPSF39981.517Gallus_gallus
ENSMMOG00000018212CPSF39883.411ENSGAFG00000008016CPSF39383.411Gambusia_affinis
ENSMMOG00000018212CPSF39684.211ENSGAFG00000019449cpsf39984.211Gambusia_affinis
ENSMMOG00000018212CPSF37076.017ENSGAGG00000025583CPSF39376.017Gopherus_agassizii
ENSMMOG00000018212CPSF39880.152ENSGGOG00000001757CPSF39981.991Gorilla_gorilla
ENSMMOG00000018212CPSF36075.500ENSHBUG00000014332CPSF39975.500Haplochromis_burtoni
ENSMMOG00000018212CPSF39886.739ENSHBUG00000001188cpsf39885.831Haplochromis_burtoni
ENSMMOG00000018212CPSF39882.016ENSHGLG00000000666CPSF39382.016Heterocephalus_glaber_female
ENSMMOG00000018212CPSF39882.016ENSHGLG00100007765CPSF39382.016Heterocephalus_glaber_male
ENSMMOG00000018212CPSF39882.764ENSHCOG00000015957CPSF39282.764Hippocampus_comes
ENSMMOG00000018212CPSF39884.844ENSHCOG00000007251cpsf39384.844Hippocampus_comes
ENSMMOG00000018212CPSF39882.919ENSIPUG00000023488cpsf39981.541Ictalurus_punctatus
ENSMMOG00000018212CPSF39882.481ENSSTOG00000004476CPSF39482.481Ictidomys_tridecemlineatus
ENSMMOG00000018212CPSF39882.171ENSJJAG00000023415Cpsf39482.171Jaculus_jaculus
ENSMMOG00000018212CPSF39885.335ENSKMAG00000002806cpsf39385.335Kryptolebias_marmoratus
ENSMMOG00000018212CPSF39882.919ENSKMAG00000007317CPSF39382.919Kryptolebias_marmoratus
ENSMMOG00000018212CPSF39484.666ENSLBEG00000013492CPSF39384.666Labrus_bergylta
ENSMMOG00000018212CPSF35682.016ENSLBEG00000015018-9982.016Labrus_bergylta
ENSMMOG00000018212CPSF39982.418ENSLBEG00000020569cpsf39082.418Labrus_bergylta
ENSMMOG00000018212CPSF39876.316ENSLACG00000008308CPSF39376.316Latimeria_chalumnae
ENSMMOG00000018212CPSF39883.025ENSLOCG00000016823cpsf39483.025Lepisosteus_oculatus
ENSMMOG00000018212CPSF39882.326ENSLAFG00000009467CPSF39582.326Loxodonta_africana
ENSMMOG00000018212CPSF39882.171ENSMFAG00000001339CPSF39982.143Macaca_fascicularis
ENSMMOG00000018212CPSF39882.171ENSMMUG00000018038CPSF39982.171Macaca_mulatta
ENSMMOG00000018212CPSF39868.217ENSMNEG00000039447CPSF39468.217Macaca_nemestrina
ENSMMOG00000018212CPSF39882.326ENSMLEG00000026825CPSF38696.528Mandrillus_leucophaeus
ENSMMOG00000018212CPSF39886.003ENSMAMG00000003076cpsf39882.545Mastacembelus_armatus
ENSMMOG00000018212CPSF39581.891ENSMAMG00000008835CPSF39981.891Mastacembelus_armatus
ENSMMOG00000018212CPSF39886.739ENSMZEG00005014358cpsf39885.831Maylandia_zebra
ENSMMOG00000018212CPSF39884.161ENSMZEG00005006258CPSF39982.512Maylandia_zebra
ENSMMOG00000018212CPSF39881.705ENSMGAG00000013995CPSF39781.705Meleagris_gallopavo
ENSMMOG00000018212CPSF35570.588ENSMAUG00000000166Cpsf39970.588Mesocricetus_auratus
ENSMMOG00000018212CPSF39878.072ENSMICG00000002363CPSF39977.673Microcebus_murinus
ENSMMOG00000018212CPSF39881.340ENSMOCG00000020067Cpsf39481.340Microtus_ochrogaster
ENSMMOG00000018212CPSF39881.135ENSMODG00000014703CPSF39481.135Monodelphis_domestica
ENSMMOG00000018212CPSF39887.500ENSMALG00000016416cpsf39986.914Monopterus_albus
ENSMMOG00000018212CPSF39680.000ENSMALG00000011474CPSF39980.000Monopterus_albus
ENSMMOG00000018212CPSF39882.481MGP_CAROLIEiJ_G0017640Cpsf39482.481Mus_caroli
ENSMMOG00000018212CPSF39882.481ENSMUSG00000054309Cpsf39397.778Mus_musculus
ENSMMOG00000018212CPSF39882.326MGP_PahariEiJ_G0029397Cpsf39482.326Mus_pahari
ENSMMOG00000018212CPSF39882.481MGP_SPRETEiJ_G0018481Cpsf39482.481Mus_spretus
ENSMMOG00000018212CPSF39882.508ENSMPUG00000013213CPSF39482.508Mustela_putorius_furo
ENSMMOG00000018212CPSF39882.508ENSMLUG00000010636CPSF39482.508Myotis_lucifugus
ENSMMOG00000018212CPSF39882.326ENSNGAG00000019836Cpsf39482.326Nannospalax_galili
ENSMMOG00000018212CPSF39886.427ENSNBRG00000004770cpsf39885.505Neolamprologus_brichardi
ENSMMOG00000018212CPSF39582.512ENSNBRG00000010525CPSF39982.512Neolamprologus_brichardi
ENSMMOG00000018212CPSF39882.171ENSNLEG00000013359CPSF39982.171Nomascus_leucogenys
ENSMMOG00000018212CPSF39853.882ENSMEUG00000013117-9453.882Notamacropus_eugenii
ENSMMOG00000018212CPSF39873.220ENSOPRG00000008902CPSF39473.220Ochotona_princeps
ENSMMOG00000018212CPSF39882.326ENSODEG00000003129CPSF39482.326Octodon_degus
ENSMMOG00000018212CPSF39886.895ENSONIG00000018812cpsf39386.895Oreochromis_niloticus
ENSMMOG00000018212CPSF38579.359ENSOANG00000008577CPSF39979.359Ornithorhynchus_anatinus
ENSMMOG00000018212CPSF39882.481ENSOCUG00000003728CPSF39482.481Oryctolagus_cuniculus
ENSMMOG00000018212CPSF39885.023ENSORLG00000018854cpsf39385.023Oryzias_latipes
ENSMMOG00000018212CPSF39884.867ENSORLG00020013331cpsf39984.967Oryzias_latipes_hni
ENSMMOG00000018212CPSF39885.023ENSORLG00015011017cpsf39984.740Oryzias_latipes_hsok
ENSMMOG00000018212CPSF39885.023ENSOMEG00000010647cpsf38985.023Oryzias_melastigma
ENSMMOG00000018212CPSF39872.093ENSOGAG00000001680CPSF39472.093Otolemur_garnettii
ENSMMOG00000018212CPSF39882.481ENSOARG00000015073CPSF39482.481Ovis_aries
ENSMMOG00000018212CPSF39882.326ENSPPAG00000042457CPSF38496.752Pan_paniscus
ENSMMOG00000018212CPSF39882.171ENSPPRG00000016790CPSF39982.326Panthera_pardus
ENSMMOG00000018212CPSF39882.171ENSPTIG00000003920CPSF39981.991Panthera_tigris_altaica
ENSMMOG00000018212CPSF39882.326ENSPTRG00000011638CPSF38496.752Pan_troglodytes
ENSMMOG00000018212CPSF39882.326ENSPANG00000016798CPSF38793.722Papio_anubis
ENSMMOG00000018212CPSF39884.496ENSPKIG00000023646cpsf39984.496Paramormyrops_kingsleyae
ENSMMOG00000018212CPSF39881.860ENSPSIG00000016144CPSF39581.860Pelodiscus_sinensis
ENSMMOG00000018212CPSF39582.055ENSPMGG00000006141-9882.055Periophthalmus_magnuspinnatus
ENSMMOG00000018212CPSF36073.434ENSPMGG00000015311CPSF39973.434Periophthalmus_magnuspinnatus
ENSMMOG00000018212CPSF39881.860ENSPEMG00000017668Cpsf39482.016Peromyscus_maniculatus_bairdii
ENSMMOG00000018212CPSF37988.024ENSPMAG00000004841cpsf39288.024Petromyzon_marinus
ENSMMOG00000018212CPSF39881.860ENSPCIG00000009823CPSF39582.437Phascolarctos_cinereus
ENSMMOG00000018212CPSF39886.385ENSPFOG00000015922cpsf39386.385Poecilia_formosa
ENSMMOG00000018212CPSF39882.791ENSPFOG00000010418-9382.791Poecilia_formosa
ENSMMOG00000018212CPSF36073.267ENSPLAG00000021300-9973.267Poecilia_latipinna
ENSMMOG00000018212CPSF39886.385ENSPLAG00000000882cpsf39386.385Poecilia_latipinna
ENSMMOG00000018212CPSF39886.385ENSPMEG00000018309cpsf39386.385Poecilia_mexicana
ENSMMOG00000018212CPSF39882.109ENSPREG00000004482CPSF39382.109Poecilia_reticulata
ENSMMOG00000018212CPSF39684.640ENSPREG00000014875cpsf39984.640Poecilia_reticulata
ENSMMOG00000018212CPSF39877.829ENSPPYG00000012666CPSF39477.829Pongo_abelii
ENSMMOG00000018212CPSF37866.734ENSPCAG00000015042CPSF37666.734Procavia_capensis
ENSMMOG00000018212CPSF38785.490ENSPCOG00000023016CPSF39385.490Propithecus_coquereli
ENSMMOG00000018212CPSF39882.663ENSPVAG00000005324CPSF39482.663Pteropus_vampyrus
ENSMMOG00000018212CPSF38587.684ENSPNYG00000021047CPSF39187.684Pundamilia_nyererei
ENSMMOG00000018212CPSF39886.739ENSPNYG00000004405cpsf39885.831Pundamilia_nyererei
ENSMMOG00000018212CPSF39883.385ENSPNAG00000023060cpsf39981.499Pygocentrus_nattereri
ENSMMOG00000018212CPSF39882.481ENSRNOG00000052418Cpsf39482.481Rattus_norvegicus
ENSMMOG00000018212CPSF39879.193ENSRBIG00000041615CPSF39979.070Rhinopithecus_bieti
ENSMMOG00000018212CPSF39882.326ENSRROG00000033792CPSF39582.326Rhinopithecus_roxellana
ENSMMOG00000018212CPSF38842.016YLR277CYSH18342.016Saccharomyces_cerevisiae
ENSMMOG00000018212CPSF39878.891ENSSBOG00000027263CPSF39478.891Saimiri_boliviensis_boliviensis
ENSMMOG00000018212CPSF39882.171ENSSHAG00000007024CPSF39482.171Sarcophilus_harrisii
ENSMMOG00000018212CPSF39884.341ENSSFOG00015002108cpsf39984.044Scleropages_formosus
ENSMMOG00000018212CPSF39486.235ENSSMAG00000020534CPSF39086.235Scophthalmus_maximus
ENSMMOG00000018212CPSF39985.276ENSSDUG00000002828cpsf39385.276Seriola_dumerili
ENSMMOG00000018212CPSF39884.161ENSSDUG00000018498CPSF39981.978Seriola_dumerili
ENSMMOG00000018212CPSF39884.161ENSSLDG00000005234CPSF39982.797Seriola_lalandi_dorsalis
ENSMMOG00000018212CPSF39985.276ENSSLDG00000008469cpsf39385.276Seriola_lalandi_dorsalis
ENSMMOG00000018212CPSF38781.579ENSSARG00000005186CPSF38181.579Sorex_araneus
ENSMMOG00000018212CPSF39880.123ENSSPUG00000015525CPSF39480.123Sphenodon_punctatus
ENSMMOG00000018212CPSF39883.075ENSSPAG00000002906CPSF39981.935Stegastes_partitus
ENSMMOG00000018212CPSF39885.803ENSSPAG00000018579cpsf39385.803Stegastes_partitus
ENSMMOG00000018212CPSF39882.481ENSSSCG00000020799CPSF39980.640Sus_scrofa
ENSMMOG00000018212CPSF39882.016ENSTGUG00000013016CPSF39482.016Taeniopygia_guttata
ENSMMOG00000018212CPSF36071.355ENSTRUG00000013905CPSF39971.355Takifugu_rubripes
ENSMMOG00000018212CPSF310086.503ENSTRUG00000007030cpsf39386.503Takifugu_rubripes
ENSMMOG00000018212CPSF36590.244ENSTBEG00000002707CPSF36390.244Tupaia_belangeri
ENSMMOG00000018212CPSF38571.353ENSTTRG00000000861CPSF38271.353Tursiops_truncatus
ENSMMOG00000018212CPSF39582.372ENSUAMG00000007535CPSF39082.372Ursus_americanus
ENSMMOG00000018212CPSF39882.481ENSUMAG00000003676CPSF39487.993Ursus_maritimus
ENSMMOG00000018212CPSF39483.062ENSVPAG00000008041CPSF39783.062Vicugna_pacos
ENSMMOG00000018212CPSF39882.481ENSVVUG00000002194CPSF39482.481Vulpes_vulpes
ENSMMOG00000018212CPSF39880.650ENSXETG00000008263cpsf39380.650Xenopus_tropicalis
ENSMMOG00000018212CPSF35572.507ENSXCOG00000000957-8771.698Xiphophorus_couchianus
ENSMMOG00000018212CPSF39886.813ENSXCOG00000019695cpsf39386.813Xiphophorus_couchianus
ENSMMOG00000018212CPSF39883.256ENSXMAG00000027291CPSF39383.256Xiphophorus_maculatus
ENSMMOG00000018212CPSF39886.406ENSXMAG00000009784cpsf39986.406Xiphophorus_maculatus

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