EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000018268 (Gene tree)
Gene ID: -
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 4055 bases
Position: chrKV751388.1:172449-176503
Accession: ZDB-GENE-030729-30
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000024004	RRM_1	PF00076.22	4.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000024404	-	303	-	ENSMMOP00000024004	100 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000018268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000018268's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000018268	slirp	79	31.579	ENSMMOG00000004241	-	76	31.579
ENSMMOG00000018268	slirp	83	30.137	ENSMMOG00000016852	-	56	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000018268	slirp	85	52.941	ENSG00000119705	SLIRP	92	55.714	Homo_sapiens
ENSMMOG00000018268	slirp	100	82.000	ENSAPOG00000001298	slirp	100	82.000	Acanthochromis_polyacanthus
ENSMMOG00000018268	slirp	70	55.714	ENSAMEG00000003975	SLIRP	77	55.714	Ailuropoda_melanoleuca
ENSMMOG00000018268	slirp	98	82.653	ENSACIG00000023083	slirp	97	82.653	Amphilophus_citrinellus
ENSMMOG00000018268	slirp	98	83.673	ENSAOCG00000006342	slirp	99	83.673	Amphiprion_ocellaris
ENSMMOG00000018268	slirp	97	84.536	ENSAPEG00000015719	-	99	84.536	Amphiprion_percula
ENSMMOG00000018268	slirp	98	83.673	ENSAPEG00000015917	slirp	99	83.673	Amphiprion_percula
ENSMMOG00000018268	slirp	100	78.000	ENSATEG00000013525	slirp	100	78.000	Anabas_testudineus
ENSMMOG00000018268	slirp	98	61.224	ENSAMXG00000018693	slirp	98	61.224	Astyanax_mexicanus
ENSMMOG00000018268	slirp	74	58.108	ENSCJAG00000016946	SLIRP	72	56.716	Callithrix_jacchus
ENSMMOG00000018268	slirp	87	51.724	ENSCAFG00020015876	-	78	51.724	Canis_lupus_dingo
ENSMMOG00000018268	slirp	74	56.757	ENSCCAG00000030130	SLIRP	69	56.757	Cebus_capucinus
ENSMMOG00000018268	slirp	76	55.263	ENSCATG00000036327	SLIRP	72	56.716	Cercocebus_atys
ENSMMOG00000018268	slirp	74	55.405	ENSCSAG00000011736	SLIRP	68	55.405	Chlorocebus_sabaeus
ENSMMOG00000018268	slirp	81	61.728	ENSCPBG00000026327	SLIRP	82	61.728	Chrysemys_picta_bellii
ENSMMOG00000018268	slirp	67	59.701	ENSCANG00000032892	SLIRP	68	59.701	Colobus_angolensis_palliatus
ENSMMOG00000018268	slirp	99	44.118	ENSCGRG00001024068	Slirp	92	44.118	Cricetulus_griseus_chok1gshd
ENSMMOG00000018268	slirp	99	44.118	ENSCGRG00000017440	Slirp	92	44.118	Cricetulus_griseus_crigri
ENSMMOG00000018268	slirp	84	63.095	ENSCSEG00000015766	slirp	86	63.095	Cynoglossus_semilaevis
ENSMMOG00000018268	slirp	80	82.500	ENSCVAG00000012504	slirp	79	82.500	Cyprinodon_variegatus
ENSMMOG00000018268	slirp	94	78.723	ENSDARG00000097753	slirp	94	77.320	Danio_rerio
ENSMMOG00000018268	slirp	87	45.977	ENSDNOG00000007721	SLIRP	78	45.977	Dasypus_novemcinctus
ENSMMOG00000018268	slirp	88	47.727	ENSDORG00000012379	Slirp	79	47.727	Dipodomys_ordii
ENSMMOG00000018268	slirp	89	48.315	ENSETEG00000010345	SLIRP	81	48.315	Echinops_telfairi
ENSMMOG00000018268	slirp	87	54.023	ENSEASG00005020193	SLIRP	78	54.023	Equus_asinus_asinus
ENSMMOG00000018268	slirp	98	44.444	ENSEEUG00000007257	SLIRP	98	44.444	Erinaceus_europaeus
ENSMMOG00000018268	slirp	96	77.083	ENSELUG00000016800	slirp	95	77.083	Esox_lucius
ENSMMOG00000018268	slirp	68	58.824	ENSFCAG00000036326	SLIRP	69	58.824	Felis_catus
ENSMMOG00000018268	slirp	78	57.692	ENSFALG00000012583	SLIRP	83	55.682	Ficedula_albicollis
ENSMMOG00000018268	slirp	85	52.874	ENSFDAG00000008347	SLIRP	77	52.874	Fukomys_damarensis
ENSMMOG00000018268	slirp	80	75.000	ENSFHEG00000004709	slirp	87	75.000	Fundulus_heteroclitus
ENSMMOG00000018268	slirp	97	74.227	ENSGMOG00000016948	slirp	93	74.227	Gadus_morhua
ENSMMOG00000018268	slirp	92	52.128	ENSGALG00000031238	SLIRP	95	52.128	Gallus_gallus
ENSMMOG00000018268	slirp	100	74.000	ENSGAFG00000010998	slirp	100	74.000	Gambusia_affinis
ENSMMOG00000018268	slirp	82	82.927	ENSGACG00000020137	slirp	95	82.927	Gasterosteus_aculeatus
ENSMMOG00000018268	slirp	88	65.169	ENSGAGG00000009953	SLIRP	61	65.169	Gopherus_agassizii
ENSMMOG00000018268	slirp	85	52.941	ENSGGOG00000011059	-	78	52.326	Gorilla_gorilla
ENSMMOG00000018268	slirp	87	47.126	ENSHGLG00000018491	SLIRP	78	47.126	Heterocephalus_glaber_female
ENSMMOG00000018268	slirp	87	47.126	ENSHGLG00100014153	SLIRP	78	47.126	Heterocephalus_glaber_male
ENSMMOG00000018268	slirp	96	81.250	ENSHCOG00000006795	slirp	97	81.250	Hippocampus_comes
ENSMMOG00000018268	slirp	98	72.449	ENSIPUG00000010214	SLIRP	98	72.449	Ictalurus_punctatus
ENSMMOG00000018268	slirp	88	50.000	ENSSTOG00000034316	SLIRP	79	50.000	Ictidomys_tridecemlineatus
ENSMMOG00000018268	slirp	98	69.388	ENSKMAG00000002038	slirp	94	69.388	Kryptolebias_marmoratus
ENSMMOG00000018268	slirp	100	69.000	ENSLBEG00000007564	slirp	100	69.000	Labrus_bergylta
ENSMMOG00000018268	slirp	97	73.196	ENSLACG00000013434	SLIRP	93	73.196	Latimeria_chalumnae
ENSMMOG00000018268	slirp	74	55.405	ENSMFAG00000042960	SLIRP	72	56.716	Macaca_fascicularis
ENSMMOG00000018268	slirp	87	50.000	ENSMMUG00000029256	SLIRP	79	50.588	Macaca_mulatta
ENSMMOG00000018268	slirp	74	55.405	ENSMNEG00000028921	SLIRP	72	56.716	Macaca_nemestrina
ENSMMOG00000018268	slirp	67	56.716	ENSMLEG00000043644	SLIRP	68	56.716	Mandrillus_leucophaeus
ENSMMOG00000018268	slirp	98	86.735	ENSMZEG00005004617	slirp	99	86.735	Maylandia_zebra
ENSMMOG00000018268	slirp	87	45.977	ENSMAUG00000003857	Slirp	78	45.977	Mesocricetus_auratus
ENSMMOG00000018268	slirp	71	57.746	ENSMICG00000012080	SLIRP	66	57.746	Microcebus_murinus
ENSMMOG00000018268	slirp	88	50.000	ENSMOCG00000016019	Slirp	78	50.000	Microtus_ochrogaster
ENSMMOG00000018268	slirp	70	54.286	ENSMODG00000005207	-	99	54.286	Monodelphis_domestica
ENSMMOG00000018268	slirp	100	76.000	ENSMALG00000012581	slirp	100	76.000	Monopterus_albus
ENSMMOG00000018268	slirp	75	53.333	MGP_CAROLIEiJ_G0017995	Slirp	69	53.333	Mus_caroli
ENSMMOG00000018268	slirp	75	53.333	ENSMUSG00000021040	Slirp	71	52.857	Mus_musculus
ENSMMOG00000018268	slirp	75	53.333	MGP_SPRETEiJ_G0018840	Slirp	67	53.333	Mus_spretus
ENSMMOG00000018268	slirp	86	55.814	ENSMLUG00000024998	-	85	53.608	Myotis_lucifugus
ENSMMOG00000018268	slirp	84	57.143	ENSMLUG00000029544	-	74	57.143	Myotis_lucifugus
ENSMMOG00000018268	slirp	87	45.977	ENSNGAG00000016363	Slirp	84	45.977	Nannospalax_galili
ENSMMOG00000018268	slirp	88	50.000	ENSNLEG00000027238	-	83	50.000	Nomascus_leucogenys
ENSMMOG00000018268	slirp	88	50.000	ENSNLEG00000032459	-	79	50.000	Nomascus_leucogenys
ENSMMOG00000018268	slirp	76	53.947	ENSODEG00000012580	SLIRP	76	52.857	Octodon_degus
ENSMMOG00000018268	slirp	98	85.714	ENSONIG00000011692	slirp	99	85.714	Oreochromis_niloticus
ENSMMOG00000018268	slirp	89	51.648	ENSOANG00000022366	SLIRP	82	51.648	Ornithorhynchus_anatinus
ENSMMOG00000018268	slirp	100	89.000	ENSORLG00000010761	slirp	78	89.000	Oryzias_latipes
ENSMMOG00000018268	slirp	100	88.000	ENSORLG00020022188	slirp	100	88.000	Oryzias_latipes_hni
ENSMMOG00000018268	slirp	99	89.899	ENSORLG00015020171	slirp	98	89.899	Oryzias_latipes_hsok
ENSMMOG00000018268	slirp	100	85.000	ENSOMEG00000019321	slirp	100	85.000	Oryzias_melastigma
ENSMMOG00000018268	slirp	85	52.941	ENSPPAG00000040710	-	78	52.326	Pan_paniscus
ENSMMOG00000018268	slirp	68	58.824	ENSPPRG00000014350	SLIRP	69	58.824	Panthera_pardus
ENSMMOG00000018268	slirp	68	58.824	ENSPTIG00000014196	SLIRP	69	58.824	Panthera_tigris_altaica
ENSMMOG00000018268	slirp	85	52.941	ENSPTRG00000030691	SLIRP	80	52.326	Pan_troglodytes
ENSMMOG00000018268	slirp	74	56.757	ENSPANG00000026323	SLIRP	72	58.209	Papio_anubis
ENSMMOG00000018268	slirp	66	72.727	ENSPKIG00000008831	slirp	65	72.727	Paramormyrops_kingsleyae
ENSMMOG00000018268	slirp	80	81.250	ENSPMGG00000010541	slirp	92	81.250	Periophthalmus_magnuspinnatus
ENSMMOG00000018268	slirp	88	44.944	ENSPEMG00000013234	Slirp	78	44.944	Peromyscus_maniculatus_bairdii
ENSMMOG00000018268	slirp	79	54.430	ENSPMAG00000009355	slirp	88	54.430	Petromyzon_marinus
ENSMMOG00000018268	slirp	79	45.570	ENSPCIG00000026842	-	85	45.570	Phascolarctos_cinereus
ENSMMOG00000018268	slirp	99	73.737	ENSPFOG00000006758	slirp	99	73.737	Poecilia_formosa
ENSMMOG00000018268	slirp	99	74.747	ENSPLAG00000011140	slirp	99	74.747	Poecilia_latipinna
ENSMMOG00000018268	slirp	99	73.737	ENSPMEG00000019535	slirp	99	73.737	Poecilia_mexicana
ENSMMOG00000018268	slirp	99	73.737	ENSPREG00000011673	slirp	99	73.737	Poecilia_reticulata
ENSMMOG00000018268	slirp	70	60.000	ENSPPYG00000006030	SLIRP	65	59.155	Pongo_abelii
ENSMMOG00000018268	slirp	88	50.000	ENSPCOG00000015159	SLIRP	76	50.000	Propithecus_coquereli
ENSMMOG00000018268	slirp	98	78.571	ENSPNAG00000008633	slirp	99	78.571	Pygocentrus_nattereri
ENSMMOG00000018268	slirp	85	49.412	ENSRBIG00000035817	-	79	50.575	Rhinopithecus_bieti
ENSMMOG00000018268	slirp	67	56.716	ENSRBIG00000032998	-	62	56.716	Rhinopithecus_bieti
ENSMMOG00000018268	slirp	88	52.273	ENSRBIG00000032222	-	81	52.273	Rhinopithecus_bieti
ENSMMOG00000018268	slirp	65	58.462	ENSRBIG00000031396	-	65	58.462	Rhinopithecus_bieti
ENSMMOG00000018268	slirp	67	58.209	ENSRROG00000017133	-	70	58.209	Rhinopithecus_roxellana
ENSMMOG00000018268	slirp	65	60.000	ENSRROG00000035604	-	65	60.000	Rhinopithecus_roxellana
ENSMMOG00000018268	slirp	88	52.273	ENSRROG00000036656	-	81	52.273	Rhinopithecus_roxellana
ENSMMOG00000018268	slirp	71	59.155	ENSRROG00000041312	-	70	59.155	Rhinopithecus_roxellana
ENSMMOG00000018268	slirp	82	52.439	ENSSBOG00000020014	SLIRP	80	55.263	Saimiri_boliviensis_boliviensis
ENSMMOG00000018268	slirp	98	64.286	ENSSFOG00015011165	slirp	98	64.286	Scleropages_formosus
ENSMMOG00000018268	slirp	100	51.961	ENSSMAG00000012930	slirp	100	51.961	Scophthalmus_maximus
ENSMMOG00000018268	slirp	100	81.000	ENSSDUG00000021883	slirp	66	81.000	Seriola_dumerili
ENSMMOG00000018268	slirp	100	81.000	ENSSLDG00000023136	slirp	91	81.000	Seriola_lalandi_dorsalis
ENSMMOG00000018268	slirp	83	63.529	ENSSPUG00000009346	SLIRP	87	63.529	Sphenodon_punctatus
ENSMMOG00000018268	slirp	100	71.000	ENSSPAG00000013477	slirp	100	71.000	Stegastes_partitus
ENSMMOG00000018268	slirp	87	52.874	ENSSSCG00000028167	SLIRP	78	52.874	Sus_scrofa
ENSMMOG00000018268	slirp	78	57.692	ENSTGUG00000012337	SLIRP	86	53.846	Taeniopygia_guttata
ENSMMOG00000018268	slirp	98	72.727	ENSTRUG00000020127	slirp	98	72.727	Takifugu_rubripes
ENSMMOG00000018268	slirp	88	53.846	ENSUAMG00000022445	SLIRP	81	53.846	Ursus_americanus
ENSMMOG00000018268	slirp	76	60.526	ENSUMAG00000007166	SLIRP	68	60.526	Ursus_maritimus
ENSMMOG00000018268	slirp	86	51.724	ENSVPAG00000001781	SLIRP	81	51.724	Vicugna_pacos
ENSMMOG00000018268	slirp	88	53.409	ENSVVUG00000004436	SLIRP	72	56.790	Vulpes_vulpes
ENSMMOG00000018268	slirp	81	72.840	ENSXETG00000030343	SLIRP	91	72.840	Xenopus_tropicalis
ENSMMOG00000018268	slirp	100	76.000	ENSXCOG00000009422	slirp	100	76.000	Xiphophorus_couchianus
ENSMMOG00000018268	slirp	100	76.000	ENSXMAG00000015655	slirp	100	76.000	Xiphophorus_maculatus