EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000019751 (Gene tree)
Gene ID: -
Gene Symbol: upf3a
Alias: -
Full Name: UPF3A%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 4852 bases
Position: chrKV751321.1:7652359-7657210
Accession: ZDB-GENE-060721-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000026036	Smg4_UPF3	PF03467.15	2.7e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000026478	-	1440	-	ENSMMOP00000026036	479 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000019751's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000019751's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000019751	upf3a	87	55.787	ENSG00000169062	UPF3A	99	52.352	Homo_sapiens
ENSMMOG00000019751	upf3a	100	88.542	ENSAPOG00000013484	upf3a	100	88.542	Acanthochromis_polyacanthus
ENSMMOG00000019751	upf3a	85	56.295	ENSAMEG00000004259	UPF3A	89	55.116	Ailuropoda_melanoleuca
ENSMMOG00000019751	upf3a	98	90.105	ENSACIG00000020468	upf3a	99	90.105	Amphilophus_citrinellus
ENSMMOG00000019751	upf3a	100	88.958	ENSAOCG00000020784	upf3a	100	88.958	Amphiprion_ocellaris
ENSMMOG00000019751	upf3a	65	57.187	ENSAOCG00000000706	upf3b	94	46.421	Amphiprion_ocellaris
ENSMMOG00000019751	upf3a	100	88.958	ENSAPEG00000003519	upf3a	100	88.958	Amphiprion_percula
ENSMMOG00000019751	upf3a	100	88.750	ENSATEG00000005843	upf3a	100	88.750	Anabas_testudineus
ENSMMOG00000019751	upf3a	87	62.937	ENSACAG00000001540	UPF3A	99	62.299	Anolis_carolinensis
ENSMMOG00000019751	upf3a	83	49.647	ENSANAG00000021894	-	77	68.485	Aotus_nancymaae
ENSMMOG00000019751	upf3a	83	43.750	ENSANAG00000025598	-	70	65.217	Aotus_nancymaae
ENSMMOG00000019751	upf3a	93	50.101	ENSANAG00000021713	UPF3A	97	50.304	Aotus_nancymaae
ENSMMOG00000019751	upf3a	100	89.813	ENSACLG00000026274	upf3a	100	89.813	Astatotilapia_calliptera
ENSMMOG00000019751	upf3a	98	78.981	ENSAMXG00000002608	upf3a	99	78.981	Astyanax_mexicanus
ENSMMOG00000019751	upf3a	93	50.943	ENSCJAG00000019102	UPF3A	99	50.302	Callithrix_jacchus
ENSMMOG00000019751	upf3a	83	49.299	ENSCJAG00000004975	UPF3B	83	65.169	Callithrix_jacchus
ENSMMOG00000019751	upf3a	85	43.692	ENSCAFG00020004074	UPF3B	69	66.279	Canis_lupus_dingo
ENSMMOG00000019751	upf3a	88	52.184	ENSCHIG00000008682	UPF3A	83	52.055	Capra_hircus
ENSMMOG00000019751	upf3a	83	42.824	ENSTSYG00000014690	UPF3B	76	63.529	Carlito_syrichta
ENSMMOG00000019751	upf3a	72	55.647	ENSTSYG00000001918	UPF3A	94	55.647	Carlito_syrichta
ENSMMOG00000019751	upf3a	66	60.976	ENSCPOG00000006824	UPF3A	76	60.976	Cavia_porcellus
ENSMMOG00000019751	upf3a	82	36.816	ENSCCAG00000029813	-	57	55.556	Cebus_capucinus
ENSMMOG00000019751	upf3a	95	50.497	ENSCCAG00000018406	UPF3A	99	50.696	Cebus_capucinus
ENSMMOG00000019751	upf3a	95	53.125	ENSCATG00000029733	UPF3A	98	53.542	Cercocebus_atys
ENSMMOG00000019751	upf3a	95	52.439	ENSCSAG00000017388	UPF3A	98	52.846	Chlorocebus_sabaeus
ENSMMOG00000019751	upf3a	99	85.325	ENSCSEG00000005106	upf3a	99	85.325	Cynoglossus_semilaevis
ENSMMOG00000019751	upf3a	100	82.744	ENSCVAG00000022333	upf3a	100	82.744	Cyprinodon_variegatus
ENSMMOG00000019751	upf3a	98	77.754	ENSDARG00000069297	upf3a	99	77.754	Danio_rerio
ENSMMOG00000019751	upf3a	74	63.215	ENSDNOG00000034391	UPF3A	90	60.000	Dasypus_novemcinctus
ENSMMOG00000019751	upf3a	85	52.732	ENSETEG00000010110	UPF3A	96	49.064	Echinops_telfairi
ENSMMOG00000019751	upf3a	83	45.564	ENSEASG00005012919	UPF3B	68	62.195	Equus_asinus_asinus
ENSMMOG00000019751	upf3a	91	52.677	ENSEASG00005021884	UPF3A	78	55.443	Equus_asinus_asinus
ENSMMOG00000019751	upf3a	83	45.564	ENSECAG00000016947	UPF3B	68	56.627	Equus_caballus
ENSMMOG00000019751	upf3a	98	78.452	ENSELUG00000011050	upf3a	99	78.452	Esox_lucius
ENSMMOG00000019751	upf3a	92	53.430	ENSFCAG00000014602	UPF3A	96	53.430	Felis_catus
ENSMMOG00000019751	upf3a	100	82.121	ENSGAFG00000021170	upf3a	100	82.121	Gambusia_affinis
ENSMMOG00000019751	upf3a	67	82.500	ENSGACG00000001972	upf3a	100	82.500	Gasterosteus_aculeatus
ENSMMOG00000019751	upf3a	85	45.146	ENSGGOG00000041219	-	90	43.705	Gorilla_gorilla
ENSMMOG00000019751	upf3a	86	44.917	ENSGGOG00000043074	-	84	43.499	Gorilla_gorilla
ENSMMOG00000019751	upf3a	95	52.352	ENSGGOG00000015428	UPF3A	99	52.556	Gorilla_gorilla
ENSMMOG00000019751	upf3a	99	88.912	ENSHBUG00000011325	upf3a	99	88.912	Haplochromis_burtoni
ENSMMOG00000019751	upf3a	78	53.553	ENSHGLG00000001544	UPF3A	50	64.929	Heterocephalus_glaber_female
ENSMMOG00000019751	upf3a	78	53.553	ENSHGLG00100013244	UPF3A	50	64.929	Heterocephalus_glaber_male
ENSMMOG00000019751	upf3a	94	77.243	ENSHCOG00000013985	upf3a	94	77.243	Hippocampus_comes
ENSMMOG00000019751	upf3a	98	76.483	ENSIPUG00000023450	upf3a	99	76.483	Ictalurus_punctatus
ENSMMOG00000019751	upf3a	100	86.694	ENSKMAG00000004381	upf3a	100	86.694	Kryptolebias_marmoratus
ENSMMOG00000019751	upf3a	98	82.166	ENSLBEG00000021570	upf3a	99	81.529	Labrus_bergylta
ENSMMOG00000019751	upf3a	61	41.061	ENSLACG00000006645	UPF3A	66	83.929	Latimeria_chalumnae
ENSMMOG00000019751	upf3a	97	72.785	ENSLOCG00000002665	upf3a	98	72.785	Lepisosteus_oculatus
ENSMMOG00000019751	upf3a	85	56.311	ENSMFAG00000045016	UPF3A	84	56.068	Macaca_fascicularis
ENSMMOG00000019751	upf3a	90	54.139	ENSMMUG00000007449	UPF3A	98	53.291	Macaca_mulatta
ENSMMOG00000019751	upf3a	85	57.282	ENSMNEG00000036402	UPF3A	82	57.282	Macaca_nemestrina
ENSMMOG00000019751	upf3a	85	56.796	ENSMLEG00000014726	UPF3A	93	56.796	Mandrillus_leucophaeus
ENSMMOG00000019751	upf3a	100	89.792	ENSMAMG00000018364	upf3a	100	89.792	Mastacembelus_armatus
ENSMMOG00000019751	upf3a	100	89.813	ENSMZEG00005021571	upf3a	100	89.813	Maylandia_zebra
ENSMMOG00000019751	upf3a	84	61.962	ENSMGAG00000014837	UPF3A	98	61.962	Meleagris_gallopavo
ENSMMOG00000019751	upf3a	54	70.155	ENSMOCG00000000550	Upf3a	51	73.224	Microtus_ochrogaster
ENSMMOG00000019751	upf3a	87	62.937	ENSMODG00000003159	UPF3A	95	64.103	Monodelphis_domestica
ENSMMOG00000019751	upf3a	92	52.401	ENSMPUG00000009139	UPF3A	95	52.401	Mustela_putorius_furo
ENSMMOG00000019751	upf3a	81	58.088	ENSMLUG00000015905	UPF3A	92	58.088	Myotis_lucifugus
ENSMMOG00000019751	upf3a	100	88.750	ENSNBRG00000000828	upf3a	100	88.750	Neolamprologus_brichardi
ENSMMOG00000019751	upf3a	87	56.028	ENSNLEG00000007563	UPF3A	99	52.857	Nomascus_leucogenys
ENSMMOG00000019751	upf3a	100	87.992	ENSONIG00000006817	upf3a	100	87.992	Oreochromis_niloticus
ENSMMOG00000019751	upf3a	74	56.911	ENSOANG00000006985	-	95	56.911	Ornithorhynchus_anatinus
ENSMMOG00000019751	upf3a	100	82.672	ENSORLG00000010911	upf3a	100	82.672	Oryzias_latipes
ENSMMOG00000019751	upf3a	100	80.793	ENSORLG00020014317	upf3a	100	80.793	Oryzias_latipes_hni
ENSMMOG00000019751	upf3a	83	40.826	ENSORLG00020003758	upf3b	60	61.202	Oryzias_latipes_hni
ENSMMOG00000019751	upf3a	100	81.420	ENSORLG00015017339	upf3a	58	81.420	Oryzias_latipes_hsok
ENSMMOG00000019751	upf3a	100	83.090	ENSOMEG00000014425	upf3a	100	83.090	Oryzias_melastigma
ENSMMOG00000019751	upf3a	84	55.263	ENSOARG00000009004	UPF3A	84	55.263	Ovis_aries
ENSMMOG00000019751	upf3a	87	55.324	ENSPPAG00000042267	UPF3A	87	55.172	Pan_paniscus
ENSMMOG00000019751	upf3a	92	53.222	ENSPPRG00000025062	UPF3A	96	53.222	Panthera_pardus
ENSMMOG00000019751	upf3a	85	42.389	ENSPTRG00000051640	-	90	40.749	Pan_troglodytes
ENSMMOG00000019751	upf3a	85	45.368	ENSPTRG00000041187	-	90	42.280	Pan_troglodytes
ENSMMOG00000019751	upf3a	87	55.324	ENSPTRG00000006073	UPF3A	99	51.738	Pan_troglodytes
ENSMMOG00000019751	upf3a	95	53.846	ENSPANG00000004346	UPF3A	98	54.054	Papio_anubis
ENSMMOG00000019751	upf3a	91	46.947	ENSPKIG00000019226	upf3b	93	64.238	Paramormyrops_kingsleyae
ENSMMOG00000019751	upf3a	97	70.747	ENSPKIG00000004422	upf3a	98	70.747	Paramormyrops_kingsleyae
ENSMMOG00000019751	upf3a	83	64.407	ENSPSIG00000007468	UPF3A	96	64.407	Pelodiscus_sinensis
ENSMMOG00000019751	upf3a	100	82.716	ENSPMGG00000012696	upf3a	100	82.752	Periophthalmus_magnuspinnatus
ENSMMOG00000019751	upf3a	75	68.584	ENSPCIG00000019590	-	90	67.476	Phascolarctos_cinereus
ENSMMOG00000019751	upf3a	100	82.708	ENSPFOG00000013222	upf3a	100	82.708	Poecilia_formosa
ENSMMOG00000019751	upf3a	99	81.646	ENSPLAG00000011960	upf3a	100	81.646	Poecilia_latipinna
ENSMMOG00000019751	upf3a	100	83.058	ENSPMEG00000000836	upf3a	100	83.058	Poecilia_mexicana
ENSMMOG00000019751	upf3a	87	55.787	ENSPPYG00000005536	UPF3A	99	52.352	Pongo_abelii
ENSMMOG00000019751	upf3a	86	43.439	ENSPCOG00000021960	UPF3B	51	68.902	Propithecus_coquereli
ENSMMOG00000019751	upf3a	82	55.181	ENSPVAG00000005656	UPF3A	81	55.181	Pteropus_vampyrus
ENSMMOG00000019751	upf3a	100	89.813	ENSPNYG00000011289	upf3a	100	89.813	Pundamilia_nyererei
ENSMMOG00000019751	upf3a	90	47.198	ENSPNAG00000021528	upf3b	63	64.103	Pygocentrus_nattereri
ENSMMOG00000019751	upf3a	98	77.707	ENSPNAG00000019532	upf3a	99	77.707	Pygocentrus_nattereri
ENSMMOG00000019751	upf3a	87	56.028	ENSRBIG00000034007	UPF3A	92	55.869	Rhinopithecus_bieti
ENSMMOG00000019751	upf3a	85	56.934	ENSRROG00000012212	UPF3A	84	56.934	Rhinopithecus_roxellana
ENSMMOG00000019751	upf3a	77	52.261	ENSSBOG00000029989	UPF3A	83	52.261	Saimiri_boliviensis_boliviensis
ENSMMOG00000019751	upf3a	86	63.615	ENSSHAG00000009895	UPF3A	97	63.953	Sarcophilus_harrisii
ENSMMOG00000019751	upf3a	98	68.856	ENSSFOG00015021851	upf3a	99	68.008	Scleropages_formosus
ENSMMOG00000019751	upf3a	50	66.932	ENSSMAG00000012913	upf3b	54	71.341	Scophthalmus_maximus
ENSMMOG00000019751	upf3a	100	83.910	ENSSMAG00000003858	upf3a	100	85.132	Scophthalmus_maximus
ENSMMOG00000019751	upf3a	100	91.250	ENSSDUG00000009680	upf3a	100	91.250	Seriola_dumerili
ENSMMOG00000019751	upf3a	100	89.583	ENSSLDG00000009700	upf3a	100	89.583	Seriola_lalandi_dorsalis
ENSMMOG00000019751	upf3a	100	89.397	ENSSPAG00000007938	upf3a	100	89.397	Stegastes_partitus
ENSMMOG00000019751	upf3a	81	56.436	ENSSSCG00000024679	UPF3A	87	53.409	Sus_scrofa
ENSMMOG00000019751	upf3a	83	64.806	ENSTGUG00000009493	UPF3A	99	64.806	Taeniopygia_guttata
ENSMMOG00000019751	upf3a	100	82.121	ENSTRUG00000012730	upf3a	100	82.121	Takifugu_rubripes
ENSMMOG00000019751	upf3a	84	74.696	ENSTNIG00000014973	upf3a	100	74.209	Tetraodon_nigroviridis
ENSMMOG00000019751	upf3a	73	53.279	ENSTTRG00000015414	UPF3A	73	53.279	Tursiops_truncatus
ENSMMOG00000019751	upf3a	83	43.645	ENSUAMG00000024565	UPF3B	66	62.500	Ursus_americanus
ENSMMOG00000019751	upf3a	81	56.250	ENSVPAG00000003525	UPF3A	94	56.250	Vicugna_pacos
ENSMMOG00000019751	upf3a	83	43.855	ENSVVUG00000011594	UPF3B	83	65.730	Vulpes_vulpes
ENSMMOG00000019751	upf3a	85	55.635	ENSXETG00000002572	upf3a	100	53.829	Xenopus_tropicalis
ENSMMOG00000019751	upf3a	83	42.721	ENSXETG00000007440	upf3b	78	66.111	Xenopus_tropicalis
ENSMMOG00000019751	upf3a	100	82.744	ENSXMAG00000013452	upf3a	100	82.744	Xiphophorus_maculatus