EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000019794 (Gene tree)
Gene ID: -
Gene Symbol: cmss1
Alias: zgc:101814
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 4841 bases
Position: chrKV751321.1:8927289-8932129
Accession: ZDB-GENE-041010-146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000026103	CMS1	PF14617.6	9.4e-30	1	1
ENSMMOP00000026103	DEAD	PF00270.29	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000026545	-	702	-	ENSMMOP00000026103	233 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000019794's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000019794's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000019794	cmss1	95	56.652	ENSG00000184220	CMSS1	98	62.500	Homo_sapiens
ENSMMOG00000019794	cmss1	84	85.714	ENSAPOG00000010604	cmss1	95	81.857	Acanthochromis_polyacanthus
ENSMMOG00000019794	cmss1	84	61.576	ENSAMEG00000004092	CMSS1	78	61.576	Ailuropoda_melanoleuca
ENSMMOG00000019794	cmss1	97	62.353	ENSACIG00000021854	cmss1	96	63.137	Amphilophus_citrinellus
ENSMMOG00000019794	cmss1	84	84.236	ENSAOCG00000013361	cmss1	89	73.462	Amphiprion_ocellaris
ENSMMOG00000019794	cmss1	84	84.236	ENSAPEG00000005829	cmss1	89	74.713	Amphiprion_percula
ENSMMOG00000019794	cmss1	98	74.286	ENSATEG00000008209	cmss1	90	74.390	Anabas_testudineus
ENSMMOG00000019794	cmss1	84	60.891	ENSAPLG00000010542	CMSS1	88	60.891	Anas_platyrhynchos
ENSMMOG00000019794	cmss1	84	60.891	ENSACAG00000011065	CMSS1	74	60.891	Anolis_carolinensis
ENSMMOG00000019794	cmss1	97	55.462	ENSANAG00000023565	CMSS1	77	61.386	Aotus_nancymaae
ENSMMOG00000019794	cmss1	84	79.803	ENSACLG00000027294	cmss1	79	74.359	Astatotilapia_calliptera
ENSMMOG00000019794	cmss1	83	67.000	ENSAMXG00000002046	cmss1	89	58.397	Astyanax_mexicanus
ENSMMOG00000019794	cmss1	84	61.386	ENSBTAG00000013663	CMSS1	73	61.386	Bos_taurus
ENSMMOG00000019794	cmss1	84	63.366	ENSCJAG00000000610	CMSS1	77	63.366	Callithrix_jacchus
ENSMMOG00000019794	cmss1	84	61.881	ENSCAFG00000009230	CMSS1	73	61.881	Canis_familiaris
ENSMMOG00000019794	cmss1	84	59.901	ENSCAFG00020024156	-	63	59.901	Canis_lupus_dingo
ENSMMOG00000019794	cmss1	84	61.881	ENSCAFG00020009464	-	74	61.881	Canis_lupus_dingo
ENSMMOG00000019794	cmss1	84	61.881	ENSCHIG00000013003	CMSS1	73	61.881	Capra_hircus
ENSMMOG00000019794	cmss1	84	60.891	ENSTSYG00000009266	CMSS1	78	60.891	Carlito_syrichta
ENSMMOG00000019794	cmss1	90	47.297	ENSCAPG00000013584	CMSS1	88	51.546	Cavia_aperea
ENSMMOG00000019794	cmss1	83	62.000	ENSCPOG00000014680	CMSS1	72	62.376	Cavia_porcellus
ENSMMOG00000019794	cmss1	97	55.882	ENSCCAG00000034685	CMSS1	77	61.881	Cebus_capucinus
ENSMMOG00000019794	cmss1	95	57.511	ENSCATG00000031980	CMSS1	77	62.376	Cercocebus_atys
ENSMMOG00000019794	cmss1	83	61.000	ENSCLAG00000011241	CMSS1	87	61.386	Chinchilla_lanigera
ENSMMOG00000019794	cmss1	95	57.511	ENSCSAG00000006024	CMSS1	82	62.376	Chlorocebus_sabaeus
ENSMMOG00000019794	cmss1	83	44.500	ENSCHOG00000012098	CMSS1	73	45.050	Choloepus_hoffmanni
ENSMMOG00000019794	cmss1	80	43.367	ENSCING00000014848	-	96	44.444	Ciona_intestinalis
ENSMMOG00000019794	cmss1	51	43.651	ENSCSAVG00000002309	-	99	43.651	Ciona_savignyi
ENSMMOG00000019794	cmss1	84	62.376	ENSCANG00000031337	CMSS1	77	62.376	Colobus_angolensis_palliatus
ENSMMOG00000019794	cmss1	84	58.911	ENSCGRG00001014305	Cmss1	73	58.911	Cricetulus_griseus_chok1gshd
ENSMMOG00000019794	cmss1	94	55.217	ENSCGRG00000006722	Cmss1	79	58.911	Cricetulus_griseus_crigri
ENSMMOG00000019794	cmss1	84	75.369	ENSCSEG00000004958	cmss1	74	67.932	Cynoglossus_semilaevis
ENSMMOG00000019794	cmss1	98	66.538	ENSCVAG00000005039	cmss1	77	71.308	Cyprinodon_variegatus
ENSMMOG00000019794	cmss1	84	67.980	ENSDARG00000112579	cmss1	76	60.251	Danio_rerio
ENSMMOG00000019794	cmss1	84	62.376	ENSDNOG00000040418	CMSS1	73	62.376	Dasypus_novemcinctus
ENSMMOG00000019794	cmss1	83	61.000	ENSDORG00000010461	Cmss1	72	61.386	Dipodomys_ordii
ENSMMOG00000019794	cmss1	54	51.515	ENSEBUG00000002156	-	96	51.515	Eptatretus_burgeri
ENSMMOG00000019794	cmss1	83	60.500	ENSEASG00005010966	CMSS1	92	60.891	Equus_asinus_asinus
ENSMMOG00000019794	cmss1	83	60.500	ENSECAG00000015662	CMSS1	89	60.891	Equus_caballus
ENSMMOG00000019794	cmss1	83	42.500	ENSEEUG00000007624	-	73	43.069	Erinaceus_europaeus
ENSMMOG00000019794	cmss1	84	69.458	ENSELUG00000019459	cmss1	68	69.458	Esox_lucius
ENSMMOG00000019794	cmss1	83	62.500	ENSFCAG00000044577	CMSS1	72	62.871	Felis_catus
ENSMMOG00000019794	cmss1	84	60.396	ENSFALG00000005816	CMSS1	85	60.396	Ficedula_albicollis
ENSMMOG00000019794	cmss1	84	62.871	ENSFDAG00000012577	CMSS1	89	62.871	Fukomys_damarensis
ENSMMOG00000019794	cmss1	93	70.085	ENSFHEG00000012008	cmss1	84	77.833	Fundulus_heteroclitus
ENSMMOG00000019794	cmss1	96	66.667	ENSGMOG00000016729	cmss1	88	66.667	Gadus_morhua
ENSMMOG00000019794	cmss1	84	62.376	ENSGALG00000015267	CMSS1	77	62.376	Gallus_gallus
ENSMMOG00000019794	cmss1	99	68.605	ENSGAFG00000021217	cmss1	97	67.829	Gambusia_affinis
ENSMMOG00000019794	cmss1	97	68.421	ENSGACG00000002798	cmss1	89	68.826	Gasterosteus_aculeatus
ENSMMOG00000019794	cmss1	96	57.741	ENSGAGG00000019861	CMSS1	79	63.366	Gopherus_agassizii
ENSMMOG00000019794	cmss1	95	57.082	ENSGGOG00000014125	CMSS1	77	61.881	Gorilla_gorilla
ENSMMOG00000019794	cmss1	97	68.898	ENSHBUG00000008431	cmss1	81	74.359	Haplochromis_burtoni
ENSMMOG00000019794	cmss1	83	62.000	ENSHGLG00000019481	CMSS1	82	62.376	Heterocephalus_glaber_female
ENSMMOG00000019794	cmss1	83	62.000	ENSHGLG00100010314	CMSS1	81	62.376	Heterocephalus_glaber_male
ENSMMOG00000019794	cmss1	98	65.116	ENSHCOG00000003222	cmss1	69	76.355	Hippocampus_comes
ENSMMOG00000019794	cmss1	94	63.445	ENSIPUG00000011591	cmss1	70	70.936	Ictalurus_punctatus
ENSMMOG00000019794	cmss1	84	60.396	ENSSTOG00000019366	CMSS1	73	60.396	Ictidomys_tridecemlineatus
ENSMMOG00000019794	cmss1	85	60.784	ENSJJAG00000014894	Cmss1	90	60.891	Jaculus_jaculus
ENSMMOG00000019794	cmss1	97	66.524	ENSKMAG00000002390	cmss1	94	66.953	Kryptolebias_marmoratus
ENSMMOG00000019794	cmss1	99	69.456	ENSLBEG00000006298	cmss1	97	70.833	Labrus_bergylta
ENSMMOG00000019794	cmss1	84	63.861	ENSLACG00000009293	CMSS1	88	63.861	Latimeria_chalumnae
ENSMMOG00000019794	cmss1	84	60.396	ENSLOCG00000009391	cmss1	71	60.396	Lepisosteus_oculatus
ENSMMOG00000019794	cmss1	83	61.500	ENSLAFG00000017509	CMSS1	89	61.881	Loxodonta_africana
ENSMMOG00000019794	cmss1	95	57.082	ENSMFAG00000045006	CMSS1	77	61.881	Macaca_fascicularis
ENSMMOG00000019794	cmss1	95	56.652	ENSMMUG00000002939	CMSS1	85	61.979	Macaca_mulatta
ENSMMOG00000019794	cmss1	95	57.082	ENSMNEG00000031315	CMSS1	77	61.881	Macaca_nemestrina
ENSMMOG00000019794	cmss1	95	57.940	ENSMLEG00000033660	CMSS1	77	62.871	Mandrillus_leucophaeus
ENSMMOG00000019794	cmss1	84	83.251	ENSMAMG00000017176	cmss1	88	71.373	Mastacembelus_armatus
ENSMMOG00000019794	cmss1	84	79.803	ENSMZEG00005021886	cmss1	79	74.359	Maylandia_zebra
ENSMMOG00000019794	cmss1	84	62.376	ENSMGAG00000014360	CMSS1	89	62.376	Meleagris_gallopavo
ENSMMOG00000019794	cmss1	84	42.079	ENSMAUG00000020609	Cmss1	66	42.079	Mesocricetus_auratus
ENSMMOG00000019794	cmss1	83	62.000	ENSMICG00000048977	CMSS1	78	62.376	Microcebus_murinus
ENSMMOG00000019794	cmss1	97	55.649	ENSMOCG00000021937	Cmss1	73	60.396	Microtus_ochrogaster
ENSMMOG00000019794	cmss1	84	62.871	ENSMODG00000002275	CMSS1	76	62.871	Monodelphis_domestica
ENSMMOG00000019794	cmss1	98	70.155	ENSMALG00000004250	cmss1	89	70.155	Monopterus_albus
ENSMMOG00000019794	cmss1	95	55.745	MGP_CAROLIEiJ_G0020824	Cmss1	73	61.386	Mus_caroli
ENSMMOG00000019794	cmss1	95	54.894	ENSMUSG00000022748	Cmss1	73	60.396	Mus_musculus
ENSMMOG00000019794	cmss1	95	55.319	MGP_PahariEiJ_G0016524	Cmss1	73	60.891	Mus_pahari
ENSMMOG00000019794	cmss1	97	54.167	MGP_SPRETEiJ_G0021724	Cmss1	73	60.396	Mus_spretus
ENSMMOG00000019794	cmss1	82	61.307	ENSMPUG00000011324	CMSS1	78	61.692	Mustela_putorius_furo
ENSMMOG00000019794	cmss1	83	60.891	ENSMLUG00000001131	CMSS1	78	61.275	Myotis_lucifugus
ENSMMOG00000019794	cmss1	84	59.901	ENSNGAG00000020316	Cmss1	72	59.901	Nannospalax_galili
ENSMMOG00000019794	cmss1	97	68.627	ENSNBRG00000003095	cmss1	77	74.672	Neolamprologus_brichardi
ENSMMOG00000019794	cmss1	95	57.940	ENSNLEG00000034172	CMSS1	85	58.696	Nomascus_leucogenys
ENSMMOG00000019794	cmss1	84	51.980	ENSMEUG00000014505	CMSS1	89	51.980	Notamacropus_eugenii
ENSMMOG00000019794	cmss1	84	62.376	ENSOPRG00000002986	CMSS1	73	62.376	Ochotona_princeps
ENSMMOG00000019794	cmss1	83	63.000	ENSODEG00000005226	-	72	63.366	Octodon_degus
ENSMMOG00000019794	cmss1	84	59.901	ENSODEG00000003558	-	75	59.901	Octodon_degus
ENSMMOG00000019794	cmss1	84	53.465	ENSODEG00000001853	-	71	53.465	Octodon_degus
ENSMMOG00000019794	cmss1	99	47.755	ENSODEG00000009446	-	78	53.234	Octodon_degus
ENSMMOG00000019794	cmss1	84	79.803	ENSONIG00000006678	cmss1	88	74.359	Oreochromis_niloticus
ENSMMOG00000019794	cmss1	92	57.014	ENSOANG00000007529	CMSS1	87	59.901	Ornithorhynchus_anatinus
ENSMMOG00000019794	cmss1	84	61.881	ENSOCUG00000025366	CMSS1	73	61.881	Oryctolagus_cuniculus
ENSMMOG00000019794	cmss1	97	69.170	ENSORLG00000020340	cmss1	71	78.325	Oryzias_latipes
ENSMMOG00000019794	cmss1	97	65.517	ENSORLG00020012235	cmss1	98	64.854	Oryzias_latipes_hni
ENSMMOG00000019794	cmss1	84	68.966	ENSORLG00015015551	cmss1	76	68.966	Oryzias_latipes_hsok
ENSMMOG00000019794	cmss1	97	70.751	ENSOMEG00000012555	cmss1	87	69.960	Oryzias_melastigma
ENSMMOG00000019794	cmss1	84	61.386	ENSOGAG00000002045	CMSS1	89	61.386	Otolemur_garnettii
ENSMMOG00000019794	cmss1	84	61.576	ENSOARG00000017899	CMSS1	70	61.576	Ovis_aries
ENSMMOG00000019794	cmss1	95	57.082	ENSPPAG00000038515	CMSS1	74	61.881	Pan_paniscus
ENSMMOG00000019794	cmss1	83	62.500	ENSPPRG00000016767	CMSS1	72	62.871	Panthera_pardus
ENSMMOG00000019794	cmss1	83	62.000	ENSPTIG00000018274	CMSS1	72	62.376	Panthera_tigris_altaica
ENSMMOG00000019794	cmss1	95	57.082	ENSPTRG00000015157	CMSS1	82	61.881	Pan_troglodytes
ENSMMOG00000019794	cmss1	89	59.545	ENSPANG00000019980	CMSS1	80	62.376	Papio_anubis
ENSMMOG00000019794	cmss1	84	68.966	ENSPKIG00000012609	cmss1	75	68.966	Paramormyrops_kingsleyae
ENSMMOG00000019794	cmss1	84	63.861	ENSPSIG00000003849	CMSS1	88	63.861	Pelodiscus_sinensis
ENSMMOG00000019794	cmss1	84	76.355	ENSPMGG00000010286	cmss1	88	76.355	Periophthalmus_magnuspinnatus
ENSMMOG00000019794	cmss1	94	57.328	ENSPEMG00000016384	Cmss1	72	60.891	Peromyscus_maniculatus_bairdii
ENSMMOG00000019794	cmss1	85	50.490	ENSPMAG00000001146	cmss1	99	50.739	Petromyzon_marinus
ENSMMOG00000019794	cmss1	84	61.386	ENSPCIG00000015656	CMSS1	77	61.386	Phascolarctos_cinereus
ENSMMOG00000019794	cmss1	97	66.797	ENSPFOG00000016849	cmss1	71	78.325	Poecilia_formosa
ENSMMOG00000019794	cmss1	97	66.406	ENSPLAG00000008323	cmss1	71	77.833	Poecilia_latipinna
ENSMMOG00000019794	cmss1	97	67.188	ENSPMEG00000021020	cmss1	70	78.818	Poecilia_mexicana
ENSMMOG00000019794	cmss1	97	66.406	ENSPREG00000007618	cmss1	87	66.797	Poecilia_reticulata
ENSMMOG00000019794	cmss1	95	57.082	ENSPPYG00000013606	CMSS1	74	61.881	Pongo_abelii
ENSMMOG00000019794	cmss1	83	61.500	ENSPCOG00000020035	CMSS1	78	61.881	Propithecus_coquereli
ENSMMOG00000019794	cmss1	83	51.000	ENSPVAG00000017031	CMSS1	72	51.485	Pteropus_vampyrus
ENSMMOG00000019794	cmss1	76	82.486	ENSPNYG00000013428	cmss1	75	75.962	Pundamilia_nyererei
ENSMMOG00000019794	cmss1	84	67.980	ENSPNAG00000007912	cmss1	69	67.980	Pygocentrus_nattereri
ENSMMOG00000019794	cmss1	95	55.319	ENSRNOG00000027888	Cmss1	79	60.396	Rattus_norvegicus
ENSMMOG00000019794	cmss1	89	59.091	ENSRBIG00000037931	CMSS1	77	61.881	Rhinopithecus_bieti
ENSMMOG00000019794	cmss1	89	59.091	ENSRROG00000042910	CMSS1	77	61.881	Rhinopithecus_roxellana
ENSMMOG00000019794	cmss1	89	58.636	ENSSBOG00000030980	CMSS1	77	61.386	Saimiri_boliviensis_boliviensis
ENSMMOG00000019794	cmss1	84	62.376	ENSSHAG00000009321	CMSS1	80	62.376	Sarcophilus_harrisii
ENSMMOG00000019794	cmss1	84	71.429	ENSSFOG00015001509	cmss1	70	71.429	Scleropages_formosus
ENSMMOG00000019794	cmss1	98	68.462	ENSSMAG00000001653	cmss1	89	68.077	Scophthalmus_maximus
ENSMMOG00000019794	cmss1	99	71.154	ENSSDUG00000007719	cmss1	90	72.308	Seriola_dumerili
ENSMMOG00000019794	cmss1	99	70.522	ENSSLDG00000012300	cmss1	90	68.539	Seriola_lalandi_dorsalis
ENSMMOG00000019794	cmss1	84	50.495	ENSSARG00000003584	CMSS1	72	50.495	Sorex_araneus
ENSMMOG00000019794	cmss1	84	61.386	ENSSPUG00000003865	CMSS1	89	61.386	Sphenodon_punctatus
ENSMMOG00000019794	cmss1	97	74.286	ENSSPAG00000019182	cmss1	76	73.061	Stegastes_partitus
ENSMMOG00000019794	cmss1	83	60.500	ENSSSCG00000011970	CMSS1	72	60.891	Sus_scrofa
ENSMMOG00000019794	cmss1	84	60.891	ENSTGUG00000013635	CMSS1	88	60.891	Taeniopygia_guttata
ENSMMOG00000019794	cmss1	99	69.349	ENSTRUG00000015265	cmss1	92	68.340	Takifugu_rubripes
ENSMMOG00000019794	cmss1	84	72.414	ENSTNIG00000002880	cmss1	74	72.414	Tetraodon_nigroviridis
ENSMMOG00000019794	cmss1	84	43.069	ENSTBEG00000016722	CMSS1	72	43.069	Tupaia_belangeri
ENSMMOG00000019794	cmss1	84	60.396	ENSTTRG00000001562	CMSS1	72	60.396	Tursiops_truncatus
ENSMMOG00000019794	cmss1	84	62.376	ENSUAMG00000024209	CMSS1	91	62.376	Ursus_americanus
ENSMMOG00000019794	cmss1	84	62.376	ENSUMAG00000001983	CMSS1	78	62.376	Ursus_maritimus
ENSMMOG00000019794	cmss1	66	60.625	ENSVPAG00000000263	CMSS1	57	60.625	Vicugna_pacos
ENSMMOG00000019794	cmss1	83	61.500	ENSVVUG00000021647	-	82	61.881	Vulpes_vulpes
ENSMMOG00000019794	cmss1	84	61.386	ENSVVUG00000007776	-	80	61.386	Vulpes_vulpes
ENSMMOG00000019794	cmss1	99	56.067	ENSXETG00000011858	cmss1	86	56.067	Xenopus_tropicalis
ENSMMOG00000019794	cmss1	86	78.365	ENSXCOG00000018724	cmss1	70	78.325	Xiphophorus_couchianus
ENSMMOG00000019794	cmss1	86	78.365	ENSXMAG00000011243	cmss1	76	78.325	Xiphophorus_maculatus