EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000019817 (Gene tree)
Gene ID: -
Gene Symbol: pum1
Alias: fb96a03|si:ch211-285e16.1|wu:fb96a03|wu:fb96a08|zgc:63671
Full Name: pumilio RNA-binding family member 1
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 14260 bases
Position: chrKV751318.1:9912372-9926631
Accession: ZDB-GENE-030131-2074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000026139	PUF	PF00806.19	5.5e-70	1	8
ENSMMOP00000026139	PUF	PF00806.19	5.5e-70	2	8
ENSMMOP00000026139	PUF	PF00806.19	5.5e-70	3	8
ENSMMOP00000026139	PUF	PF00806.19	5.5e-70	4	8
ENSMMOP00000026139	PUF	PF00806.19	5.5e-70	5	8
ENSMMOP00000026139	PUF	PF00806.19	5.5e-70	6	8
ENSMMOP00000026139	PUF	PF00806.19	5.5e-70	7	8
ENSMMOP00000026139	PUF	PF00806.19	5.5e-70	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000026581	-	2802	-	ENSMMOP00000026139	933 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000019817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000019817's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000019817	pum1	99	84.878	ENSMMOG00000002975	pum2	73	84.988

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000019817	pum1	100	91.283	ENSG00000134644	PUM1	99	88.276	Homo_sapiens
ENSMMOG00000019817	pum1	100	87.984	ENSAPOG00000021632	pum1	100	87.373	Acanthochromis_polyacanthus
ENSMMOG00000019817	pum1	100	90.843	ENSAMEG00000017656	PUM1	87	88.276	Ailuropoda_melanoleuca
ENSMMOG00000019817	pum1	100	71.944	ENSACIG00000021013	pum1	86	98.313	Amphilophus_citrinellus
ENSMMOG00000019817	pum1	100	92.261	ENSAOCG00000003944	pum1	100	92.261	Amphiprion_ocellaris
ENSMMOG00000019817	pum1	100	92.261	ENSAPEG00000014550	pum1	100	92.261	Amphiprion_percula
ENSMMOG00000019817	pum1	100	92.041	ENSATEG00000016004	pum1	100	92.041	Anabas_testudineus
ENSMMOG00000019817	pum1	100	91.325	ENSAPLG00000009351	PUM1	90	88.276	Anas_platyrhynchos
ENSMMOG00000019817	pum1	100	91.325	ENSACAG00000000682	PUM1	88	88.276	Anolis_carolinensis
ENSMMOG00000019817	pum1	100	91.041	ENSANAG00000027865	PUM1	90	88.453	Aotus_nancymaae
ENSMMOG00000019817	pum1	100	72.222	ENSACLG00000019354	pum1	93	98.313	Astatotilapia_calliptera
ENSMMOG00000019817	pum1	100	91.283	ENSBTAG00000018979	PUM1	90	88.684	Bos_taurus
ENSMMOG00000019817	pum1	100	91.283	ENSCJAG00000006035	PUM1	90	88.276	Callithrix_jacchus
ENSMMOG00000019817	pum1	100	90.843	ENSCAFG00000011205	PUM1	77	88.276	Canis_familiaris
ENSMMOG00000019817	pum1	100	90.843	ENSCAFG00020024616	PUM1	100	88.276	Canis_lupus_dingo
ENSMMOG00000019817	pum1	100	91.283	ENSCHIG00000012952	PUM1	90	88.684	Capra_hircus
ENSMMOG00000019817	pum1	100	90.843	ENSTSYG00000008868	PUM1	90	88.276	Carlito_syrichta
ENSMMOG00000019817	pum1	100	90.602	ENSCPOG00000031613	PUM1	90	88.046	Cavia_porcellus
ENSMMOG00000019817	pum1	100	90.843	ENSCATG00000017991	PUM1	84	89.888	Cercocebus_atys
ENSMMOG00000019817	pum1	100	90.602	ENSCLAG00000007662	PUM1	90	88.046	Chinchilla_lanigera
ENSMMOG00000019817	pum1	100	90.843	ENSCSAG00000001028	PUM1	90	88.276	Chlorocebus_sabaeus
ENSMMOG00000019817	pum1	99	64.706	ENSCHOG00000010245	PUM1	82	64.976	Choloepus_hoffmanni
ENSMMOG00000019817	pum1	100	91.566	ENSCPBG00000009288	PUM1	99	88.506	Chrysemys_picta_bellii
ENSMMOG00000019817	pum1	100	91.283	ENSCANG00000042606	PUM1	88	88.276	Colobus_angolensis_palliatus
ENSMMOG00000019817	pum1	100	90.557	ENSCGRG00001024949	Pum1	90	87.991	Cricetulus_griseus_chok1gshd
ENSMMOG00000019817	pum1	100	90.557	ENSCGRG00000014197	Pum1	90	87.991	Cricetulus_griseus_crigri
ENSMMOG00000019817	pum1	100	69.501	ENSCSEG00000015981	pum1	87	99.274	Cynoglossus_semilaevis
ENSMMOG00000019817	pum1	96	97.349	ENSCVAG00000007043	pum1	85	97.349	Cyprinodon_variegatus
ENSMMOG00000019817	pum1	100	94.940	ENSDARG00000099256	pum1	81	93.253	Danio_rerio
ENSMMOG00000019817	pum1	100	90.361	ENSDNOG00000010939	PUM1	90	87.816	Dasypus_novemcinctus
ENSMMOG00000019817	pum1	100	75.752	ENSDORG00000001875	Pum1	100	73.795	Dipodomys_ordii
ENSMMOG00000019817	pum1	98	77.688	ENSETEG00000004355	PUM1	87	75.510	Echinops_telfairi
ENSMMOG00000019817	pum1	100	90.361	ENSEASG00005010813	PUM1	90	87.816	Equus_asinus_asinus
ENSMMOG00000019817	pum1	100	90.361	ENSECAG00000021369	PUM1	90	87.816	Equus_caballus
ENSMMOG00000019817	pum1	74	90.602	ENSEEUG00000003871	PUM1	58	88.046	Erinaceus_europaeus
ENSMMOG00000019817	pum1	77	96.368	ENSELUG00000002409	pum1	92	95.663	Esox_lucius
ENSMMOG00000019817	pum1	100	90.843	ENSFCAG00000010374	PUM1	90	88.276	Felis_catus
ENSMMOG00000019817	pum1	100	91.325	ENSFALG00000001214	PUM1	87	88.276	Ficedula_albicollis
ENSMMOG00000019817	pum1	100	90.534	ENSFDAG00000011319	PUM1	90	88.046	Fukomys_damarensis
ENSMMOG00000019817	pum1	89	98.072	ENSGMOG00000010491	pum1	75	98.072	Gadus_morhua
ENSMMOG00000019817	pum1	100	91.325	ENSGALG00000042598	PUM1	90	88.276	Gallus_gallus
ENSMMOG00000019817	pum1	100	91.242	ENSGAFG00000015617	pum1	100	91.242	Gambusia_affinis
ENSMMOG00000019817	pum1	100	98.313	ENSGACG00000005717	pum1	85	98.313	Gasterosteus_aculeatus
ENSMMOG00000019817	pum1	100	91.566	ENSGAGG00000001290	PUM1	99	88.506	Gopherus_agassizii
ENSMMOG00000019817	pum1	100	90.843	ENSGGOG00000011983	PUM1	90	88.276	Gorilla_gorilla
ENSMMOG00000019817	pum1	100	72.315	ENSHBUG00000018718	pum1	85	98.313	Haplochromis_burtoni
ENSMMOG00000019817	pum1	100	90.291	ENSHGLG00000013819	Pum1	90	87.816	Heterocephalus_glaber_female
ENSMMOG00000019817	pum1	100	90.291	ENSHGLG00100008621	Pum1	90	87.816	Heterocephalus_glaber_male
ENSMMOG00000019817	pum1	51	98.333	ENSHCOG00000005149	pum1	100	98.066	Hippocampus_comes
ENSMMOG00000019817	pum1	100	95.663	ENSIPUG00000020421	pum1	84	93.976	Ictalurus_punctatus
ENSMMOG00000019817	pum1	100	90.602	ENSSTOG00000010757	PUM1	90	88.046	Ictidomys_tridecemlineatus
ENSMMOG00000019817	pum1	100	90.843	ENSJJAG00000000530	Pum1	90	88.276	Jaculus_jaculus
ENSMMOG00000019817	pum1	100	71.759	ENSKMAG00000003481	pum1	85	97.831	Kryptolebias_marmoratus
ENSMMOG00000019817	pum1	100	71.747	ENSLBEG00000002527	pum1	85	98.795	Labrus_bergylta
ENSMMOG00000019817	pum1	100	83.732	ENSLACG00000017188	PUM1	81	81.667	Latimeria_chalumnae
ENSMMOG00000019817	pum1	100	93.735	ENSLOCG00000005210	pum1	85	93.494	Lepisosteus_oculatus
ENSMMOG00000019817	pum1	100	89.880	ENSLAFG00000003178	PUM1	90	87.356	Loxodonta_africana
ENSMMOG00000019817	pum1	100	90.843	ENSMFAG00000010291	PUM1	90	88.276	Macaca_fascicularis
ENSMMOG00000019817	pum1	100	90.843	ENSMMUG00000013520	PUM1	90	88.276	Macaca_mulatta
ENSMMOG00000019817	pum1	100	90.843	ENSMNEG00000034639	PUM1	90	88.276	Macaca_nemestrina
ENSMMOG00000019817	pum1	100	91.283	ENSMLEG00000038743	PUM1	89	88.276	Mandrillus_leucophaeus
ENSMMOG00000019817	pum1	100	91.566	ENSMAMG00000011606	pum1	93	91.566	Mastacembelus_armatus
ENSMMOG00000019817	pum1	100	72.315	ENSMZEG00005005834	pum1	85	98.313	Maylandia_zebra
ENSMMOG00000019817	pum1	100	91.325	ENSMGAG00000000724	PUM1	90	88.276	Meleagris_gallopavo
ENSMMOG00000019817	pum1	100	90.602	ENSMAUG00000022090	Pum1	90	88.046	Mesocricetus_auratus
ENSMMOG00000019817	pum1	100	90.073	ENSMICG00000012213	-	89	85.912	Microcebus_murinus
ENSMMOG00000019817	pum1	100	90.602	ENSMICG00000007713	-	90	88.046	Microcebus_murinus
ENSMMOG00000019817	pum1	100	90.602	ENSMOCG00000015463	Pum1	90	88.046	Microtus_ochrogaster
ENSMMOG00000019817	pum1	100	91.084	ENSMODG00000017067	PUM1	89	87.816	Monodelphis_domestica
ENSMMOG00000019817	pum1	100	90.937	ENSMALG00000016399	pum1	100	90.937	Monopterus_albus
ENSMMOG00000019817	pum1	100	91.283	MGP_CAROLIEiJ_G0026549	Pum1	90	88.684	Mus_caroli
ENSMMOG00000019817	pum1	100	91.041	ENSMUSG00000028580	Pum1	90	88.453	Mus_musculus
ENSMMOG00000019817	pum1	100	91.041	MGP_PahariEiJ_G0028881	Pum1	90	88.453	Mus_pahari
ENSMMOG00000019817	pum1	100	91.041	MGP_SPRETEiJ_G0027529	Pum1	90	88.453	Mus_spretus
ENSMMOG00000019817	pum1	100	91.325	ENSMPUG00000015454	PUM1	90	88.276	Mustela_putorius_furo
ENSMMOG00000019817	pum1	100	91.283	ENSMLUG00000006490	PUM1	90	88.684	Myotis_lucifugus
ENSMMOG00000019817	pum1	100	90.602	ENSNGAG00000002378	Pum1	90	88.046	Nannospalax_galili
ENSMMOG00000019817	pum1	100	88.136	ENSNLEG00000001151	PUM1	87	85.287	Nomascus_leucogenys
ENSMMOG00000019817	pum1	57	83.471	ENSMEUG00000000976	-	52	80.992	Notamacropus_eugenii
ENSMMOG00000019817	pum1	78	90.654	ENSOPRG00000001776	PUM1	54	90.654	Ochotona_princeps
ENSMMOG00000019817	pum1	100	90.602	ENSODEG00000003465	PUM1	90	88.046	Octodon_degus
ENSMMOG00000019817	pum1	100	98.317	ENSONIG00000002290	pum1	85	98.554	Oreochromis_niloticus
ENSMMOG00000019817	pum1	92	63.926	ENSOANG00000004902	-	92	63.636	Ornithorhynchus_anatinus
ENSMMOG00000019817	pum1	99	90.998	ENSOCUG00000008641	PUM1	89	88.399	Oryctolagus_cuniculus
ENSMMOG00000019817	pum1	100	97.349	ENSORLG00000011482	pum1	92	97.349	Oryzias_latipes
ENSMMOG00000019817	pum1	100	97.349	ENSORLG00020019461	pum1	92	97.349	Oryzias_latipes_hni
ENSMMOG00000019817	pum1	100	71.745	ENSORLG00015011375	pum1	85	97.349	Oryzias_latipes_hsok
ENSMMOG00000019817	pum1	100	91.892	ENSOMEG00000009312	pum1	100	91.892	Oryzias_melastigma
ENSMMOG00000019817	pum1	100	90.843	ENSOARG00000001899	PUM1	90	88.276	Ovis_aries
ENSMMOG00000019817	pum1	100	90.843	ENSPPAG00000044003	PUM1	90	88.276	Pan_paniscus
ENSMMOG00000019817	pum1	100	91.283	ENSPPRG00000001370	PUM1	87	88.276	Panthera_pardus
ENSMMOG00000019817	pum1	100	91.283	ENSPTIG00000010798	PUM1	87	88.276	Panthera_tigris_altaica
ENSMMOG00000019817	pum1	100	90.843	ENSPTRG00000000453	PUM1	90	88.276	Pan_troglodytes
ENSMMOG00000019817	pum1	100	91.283	ENSPANG00000016338	PUM1	90	88.276	Papio_anubis
ENSMMOG00000019817	pum1	100	93.976	ENSPKIG00000010578	pum1	84	93.976	Paramormyrops_kingsleyae
ENSMMOG00000019817	pum1	100	92.010	ENSPSIG00000014118	PUM1	90	88.506	Pelodiscus_sinensis
ENSMMOG00000019817	pum1	77	98.789	ENSPMGG00000005836	pum1	78	98.789	Periophthalmus_magnuspinnatus
ENSMMOG00000019817	pum1	100	90.602	ENSPEMG00000010009	Pum1	90	88.046	Peromyscus_maniculatus_bairdii
ENSMMOG00000019817	pum1	100	91.084	ENSPCIG00000014151	PUM1	90	87.816	Phascolarctos_cinereus
ENSMMOG00000019817	pum1	100	70.914	ENSPFOG00000007289	pum1	96	97.349	Poecilia_formosa
ENSMMOG00000019817	pum1	57	97.349	ENSPMEG00000019543	pum1	91	97.349	Poecilia_mexicana
ENSMMOG00000019817	pum1	100	71.667	ENSPREG00000005195	pum1	92	97.349	Poecilia_reticulata
ENSMMOG00000019817	pum1	100	90.843	ENSPPYG00000001621	PUM1	90	88.276	Pongo_abelii
ENSMMOG00000019817	pum1	78	92.593	ENSPCAG00000001979	PUM1	59	92.593	Procavia_capensis
ENSMMOG00000019817	pum1	100	90.602	ENSPCOG00000004398	PUM1	90	88.046	Propithecus_coquereli
ENSMMOG00000019817	pum1	100	85.060	ENSPVAG00000005207	PUM1	87	82.759	Pteropus_vampyrus
ENSMMOG00000019817	pum1	100	87.475	ENSPNYG00000009518	pum1	100	87.780	Pundamilia_nyererei
ENSMMOG00000019817	pum1	100	82.452	ENSRNOG00000011709	Pum1	90	88.453	Rattus_norvegicus
ENSMMOG00000019817	pum1	100	90.843	ENSRBIG00000042521	PUM1	90	88.276	Rhinopithecus_bieti
ENSMMOG00000019817	pum1	100	91.283	ENSRROG00000020156	PUM1	90	88.684	Rhinopithecus_roxellana
ENSMMOG00000019817	pum1	100	90.843	ENSSBOG00000032037	PUM1	90	88.276	Saimiri_boliviensis_boliviensis
ENSMMOG00000019817	pum1	100	91.084	ENSSHAG00000010918	PUM1	89	87.816	Sarcophilus_harrisii
ENSMMOG00000019817	pum1	100	91.548	ENSSMAG00000010918	pum1	100	91.548	Scophthalmus_maximus
ENSMMOG00000019817	pum1	57	99.167	ENSSDUG00000009021	pum1	80	99.167	Seriola_dumerili
ENSMMOG00000019817	pum1	100	98.795	ENSSLDG00000009667	pum1	84	98.795	Seriola_lalandi_dorsalis
ENSMMOG00000019817	pum1	96	90.843	ENSSARG00000003055	PUM1	81	88.276	Sorex_araneus
ENSMMOG00000019817	pum1	100	91.325	ENSSPUG00000006267	PUM1	90	88.276	Sphenodon_punctatus
ENSMMOG00000019817	pum1	100	92.363	ENSSPAG00000016636	pum1	100	92.363	Stegastes_partitus
ENSMMOG00000019817	pum1	100	91.283	ENSSSCG00000003591	PUM1	90	88.276	Sus_scrofa
ENSMMOG00000019817	pum1	100	72.593	ENSTRUG00000013121	pum1	92	98.795	Takifugu_rubripes
ENSMMOG00000019817	pum1	100	72.433	ENSTNIG00000016983	pum1	91	98.558	Tetraodon_nigroviridis
ENSMMOG00000019817	pum1	72	89.024	ENSTBEG00000013810	PUM1	71	89.024	Tupaia_belangeri
ENSMMOG00000019817	pum1	100	90.361	ENSTTRG00000007436	PUM1	87	87.816	Tursiops_truncatus
ENSMMOG00000019817	pum1	98	90.615	ENSUAMG00000018262	-	89	87.234	Ursus_americanus
ENSMMOG00000019817	pum1	100	76.305	ENSUMAG00000009211	PUM1	89	74.447	Ursus_maritimus
ENSMMOG00000019817	pum1	89	90.843	ENSVPAG00000005902	PUM1	77	88.276	Vicugna_pacos
ENSMMOG00000019817	pum1	100	91.283	ENSVVUG00000014631	PUM1	90	88.276	Vulpes_vulpes
ENSMMOG00000019817	pum1	100	81.928	ENSXETG00000012904	pum1	89	79.310	Xenopus_tropicalis
ENSMMOG00000019817	pum1	100	71.204	ENSXMAG00000002945	pum1	92	97.349	Xiphophorus_maculatus