EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000020022 (Gene tree)
Gene ID: -
Gene Symbol: rab20
Alias: fb01f02|wu:fb01f02|wu:fj82g08|zgc:64047
Full Name: RAB20%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 4090 bases
Position: chrKV751321.1:11303196-11307285
Accession: ZDB-GENE-030131-9143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000026416	MMR_HSR1	PF01926.23	3.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000026871	-	717	-	ENSMMOP00000026416	238 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000020022's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000020022's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000020022	rab20	55	31.159	ENSMMOG00000015287	rab4a	65	31.159
ENSMMOG00000020022	rab20	55	36.296	ENSMMOG00000020621	rab5c	61	36.296
ENSMMOG00000020022	rab20	97	30.290	ENSMMOG00000019157	rab25a	93	30.204
ENSMMOG00000020022	rab20	55	31.852	ENSMMOG00000003924	-	70	31.852
ENSMMOG00000020022	rab20	56	33.566	ENSMMOG00000019779	zgc:101559	56	33.566
ENSMMOG00000020022	rab20	62	31.847	ENSMMOG00000014400	rab34a	53	31.847
ENSMMOG00000020022	rab20	58	35.915	ENSMMOG00000004059	rab22a	71	35.915
ENSMMOG00000020022	rab20	55	33.333	ENSMMOG00000020522	rab1ba	69	33.333
ENSMMOG00000020022	rab20	51	35.075	ENSMMOG00000017443	rab33ba	64	35.075
ENSMMOG00000020022	rab20	72	32.258	ENSMMOG00000012367	-	81	32.258
ENSMMOG00000020022	rab20	71	31.319	ENSMMOG00000020069	rab9a	79	31.319
ENSMMOG00000020022	rab20	55	33.333	ENSMMOG00000007951	rab1ab	67	33.333
ENSMMOG00000020022	rab20	54	33.083	ENSMMOG00000018709	RAB1A	68	33.083
ENSMMOG00000020022	rab20	80	30.256	ENSMMOG00000016209	rab6a	74	30.256
ENSMMOG00000020022	rab20	55	35.211	ENSMMOG00000019258	RAB17	60	35.211
ENSMMOG00000020022	rab20	53	30.882	ENSMMOG00000014491	RAB39B	62	30.882
ENSMMOG00000020022	rab20	55	38.519	ENSMMOG00000019135	rab5aa	63	38.519

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000020022	rab20	100	79.767	ENSATEG00000011117	rab20	100	79.767	Anabas_testudineus
ENSMMOG00000020022	rab20	100	64.286	ENSAPLG00000011744	RAB20	99	64.286	Anas_platyrhynchos
ENSMMOG00000020022	rab20	99	61.441	ENSACAG00000014045	RAB20	99	61.441	Anolis_carolinensis
ENSMMOG00000020022	rab20	100	67.460	ENSAMXG00000003504	rab20	99	67.742	Astyanax_mexicanus
ENSMMOG00000020022	rab20	99	66.949	ENSCPBG00000005866	RAB20	99	66.949	Chrysemys_picta_bellii
ENSMMOG00000020022	rab20	99	81.857	ENSCSEG00000011160	rab20	100	81.857	Cynoglossus_semilaevis
ENSMMOG00000020022	rab20	99	75.104	ENSDARG00000005049	rab20	97	75.104	Danio_rerio
ENSMMOG00000020022	rab20	99	70.817	ENSELUG00000004092	rab20	98	70.817	Esox_lucius
ENSMMOG00000020022	rab20	100	65.546	ENSFALG00000004409	RAB20	99	65.546	Ficedula_albicollis
ENSMMOG00000020022	rab20	100	83.750	ENSGACG00000003527	rab20	100	83.750	Gasterosteus_aculeatus
ENSMMOG00000020022	rab20	100	76.680	ENSHCOG00000013468	rab20	98	76.680	Hippocampus_comes
ENSMMOG00000020022	rab20	100	70.661	ENSIPUG00000018288	RAB20	97	70.711	Ictalurus_punctatus
ENSMMOG00000020022	rab20	100	70.661	ENSIPUG00000000432	RAB20	97	70.711	Ictalurus_punctatus
ENSMMOG00000020022	rab20	99	66.245	ENSLACG00000011001	RAB20	99	66.245	Latimeria_chalumnae
ENSMMOG00000020022	rab20	100	82.101	ENSMAMG00000015214	rab20	98	82.101	Mastacembelus_armatus
ENSMMOG00000020022	rab20	100	62.605	ENSMEUG00000009442	RAB20	99	62.605	Notamacropus_eugenii
ENSMMOG00000020022	rab20	85	50.943	ENSPMAG00000004439	rab20	98	51.415	Petromyzon_marinus
ENSMMOG00000020022	rab20	100	71.311	ENSPNAG00000008867	rab20	99	71.311	Pygocentrus_nattereri
ENSMMOG00000020022	rab20	100	78.599	ENSSMAG00000018818	rab20	100	78.599	Scophthalmus_maximus
ENSMMOG00000020022	rab20	100	82.101	ENSSDUG00000005148	rab20	98	82.101	Seriola_dumerili
ENSMMOG00000020022	rab20	100	64.286	ENSTGUG00000008797	RAB20	99	64.286	Taeniopygia_guttata
ENSMMOG00000020022	rab20	100	81.712	ENSTRUG00000022951	rab20	98	81.712	Takifugu_rubripes
ENSMMOG00000020022	rab20	95	87.556	ENSTNIG00000013920	rab20	100	86.134	Tetraodon_nigroviridis