EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000020051 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: -
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 8842 bases
Position: chrKV751324.1:11616372-11625213
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000026457	RRM_1	PF00076.22	1.8e-16	1	1
ENSMMOP00000026459	RRM_1	PF00076.22	2.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000026912	-	678	-	ENSMMOP00000026457	225 (aa)	-	-
ENSMMOT00000026914	-	735	-	ENSMMOP00000026459	244 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000020051's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000020051's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000020051	-	61	78.832	ENSMMOG00000019054	rbm24a	65	78.832
ENSMMOG00000020051	-	68	72.500	ENSMMOG00000001750	rbm24b	91	80.165

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000020051	-	99	66.667	ENSG00000132819	RBM38	94	86.441	Homo_sapiens
ENSMMOG00000020051	-	100	94.262	ENSAPOG00000009939	-	100	94.262	Acanthochromis_polyacanthus
ENSMMOG00000020051	-	100	65.490	ENSAPOG00000003301	rbm38	98	65.079	Acanthochromis_polyacanthus
ENSMMOG00000020051	-	100	94.672	ENSACIG00000012502	-	100	97.458	Amphilophus_citrinellus
ENSMMOG00000020051	-	100	63.922	ENSACIG00000000010	rbm38	98	63.492	Amphilophus_citrinellus
ENSMMOG00000020051	-	100	65.490	ENSAOCG00000013497	-	98	65.079	Amphiprion_ocellaris
ENSMMOG00000020051	-	97	94.093	ENSAOCG00000012559	RBM38	100	94.093	Amphiprion_ocellaris
ENSMMOG00000020051	-	100	93.852	ENSAPEG00000023581	-	100	93.852	Amphiprion_percula
ENSMMOG00000020051	-	95	71.101	ENSAPEG00000013137	rbm38	92	71.101	Amphiprion_percula
ENSMMOG00000020051	-	100	95.082	ENSATEG00000016710	-	100	95.082	Anabas_testudineus
ENSMMOG00000020051	-	100	62.745	ENSATEG00000016366	rbm38	97	64.629	Anabas_testudineus
ENSMMOG00000020051	-	95	67.660	ENSACAG00000016238	RBM38	90	68.326	Anolis_carolinensis
ENSMMOG00000020051	-	90	71.296	ENSANAG00000031959	RBM38	96	82.759	Aotus_nancymaae
ENSMMOG00000020051	-	100	92.213	ENSACLG00000019514	-	100	92.213	Astatotilapia_calliptera
ENSMMOG00000020051	-	96	65.385	ENSAMXG00000038120	rbm38	97	63.248	Astyanax_mexicanus
ENSMMOG00000020051	-	100	77.459	ENSAMXG00000015601	-	100	75.820	Astyanax_mexicanus
ENSMMOG00000020051	-	99	65.145	ENSBTAG00000008105	RBM38	99	65.000	Bos_taurus
ENSMMOG00000020051	-	99	67.500	ENSCJAG00000019139	RBM38	96	82.759	Callithrix_jacchus
ENSMMOG00000020051	-	99	67.782	ENSCAFG00020021943	RBM38	99	67.782	Canis_lupus_dingo
ENSMMOG00000020051	-	99	64.730	ENSCHIG00000002609	RBM38	99	64.583	Capra_hircus
ENSMMOG00000020051	-	99	66.667	ENSCPOG00000012781	RBM38	99	66.527	Cavia_porcellus
ENSMMOG00000020051	-	99	67.500	ENSCCAG00000036872	RBM38	96	82.759	Cebus_capucinus
ENSMMOG00000020051	-	99	67.647	ENSCATG00000032133	RBM38	96	82.759	Cercocebus_atys
ENSMMOG00000020051	-	97	68.103	ENSCLAG00000005906	RBM38	98	67.532	Chinchilla_lanigera
ENSMMOG00000020051	-	99	67.647	ENSCSAG00000015503	RBM38	99	67.511	Chlorocebus_sabaeus
ENSMMOG00000020051	-	93	71.171	ENSCPBG00000024059	RBM38	100	69.683	Chrysemys_picta_bellii
ENSMMOG00000020051	-	65	61.538	ENSCING00000025102	-	66	61.538	Ciona_intestinalis
ENSMMOG00000020051	-	67	62.420	ENSCSAVG00000001132	-	57	62.338	Ciona_savignyi
ENSMMOG00000020051	-	99	53.165	ENSCANG00000030105	-	88	51.899	Colobus_angolensis_palliatus
ENSMMOG00000020051	-	97	67.241	ENSCGRG00001012928	Rbm38	95	65.801	Cricetulus_griseus_chok1gshd
ENSMMOG00000020051	-	84	61.979	ENSCSEG00000020943	rbm38	63	63.731	Cynoglossus_semilaevis
ENSMMOG00000020051	-	100	90.574	ENSCSEG00000004701	-	100	90.574	Cynoglossus_semilaevis
ENSMMOG00000020051	-	99	60.643	ENSCVAG00000015952	rbm38	98	60.317	Cyprinodon_variegatus
ENSMMOG00000020051	-	100	88.115	ENSCVAG00000005472	-	100	88.115	Cyprinodon_variegatus
ENSMMOG00000020051	-	99	71.605	ENSDARG00000058818	rbm38	100	68.724	Danio_rerio
ENSMMOG00000020051	-	90	71.635	ENSDNOG00000032004	RBM38	98	71.014	Dasypus_novemcinctus
ENSMMOG00000020051	-	50	78.571	ENSEBUG00000015164	rbm38	67	78.571	Eptatretus_burgeri
ENSMMOG00000020051	-	99	66.109	ENSECAG00000007700	RBM38	99	65.546	Equus_caballus
ENSMMOG00000020051	-	99	64.876	ENSEEUG00000013489	RBM38	99	65.560	Erinaceus_europaeus
ENSMMOG00000020051	-	84	73.016	ENSELUG00000000585	-	98	64.000	Esox_lucius
ENSMMOG00000020051	-	100	83.133	ENSELUG00000005849	-	100	81.526	Esox_lucius
ENSMMOG00000020051	-	99	64.730	ENSFCAG00000042916	RBM38	96	79.661	Felis_catus
ENSMMOG00000020051	-	77	75.141	ENSFALG00000010805	RBM38	93	72.678	Ficedula_albicollis
ENSMMOG00000020051	-	100	62.302	ENSFHEG00000017748	rbm38	98	60.317	Fundulus_heteroclitus
ENSMMOG00000020051	-	94	89.252	ENSFHEG00000006160	-	96	89.252	Fundulus_heteroclitus
ENSMMOG00000020051	-	81	87.027	ENSGMOG00000016655	-	99	85.405	Gadus_morhua
ENSMMOG00000020051	-	93	70.136	ENSGALG00000026081	RBM38	100	69.545	Gallus_gallus
ENSMMOG00000020051	-	93	71.698	ENSGACG00000015224	rbm38	100	71.698	Gasterosteus_aculeatus
ENSMMOG00000020051	-	94	86.087	ENSGACG00000009873	-	100	86.636	Gasterosteus_aculeatus
ENSMMOG00000020051	-	93	71.622	ENSGAGG00000001187	RBM38	100	69.683	Gopherus_agassizii
ENSMMOG00000020051	-	100	92.213	ENSHBUG00000011778	-	100	92.213	Haplochromis_burtoni
ENSMMOG00000020051	-	100	63.922	ENSHBUG00000012058	rbm38	98	63.492	Haplochromis_burtoni
ENSMMOG00000020051	-	99	62.762	ENSHGLG00000015077	RBM38	99	64.854	Heterocephalus_glaber_female
ENSMMOG00000020051	-	87	90.306	ENSHCOG00000005622	-	57	92.424	Hippocampus_comes
ENSMMOG00000020051	-	83	58.824	ENSHCOG00000019040	rbm38	78	56.633	Hippocampus_comes
ENSMMOG00000020051	-	100	71.660	ENSIPUG00000019349	-	100	70.445	Ictalurus_punctatus
ENSMMOG00000020051	-	92	61.373	ENSKMAG00000012402	rbm38	98	61.373	Kryptolebias_marmoratus
ENSMMOG00000020051	-	100	92.339	ENSLBEG00000016163	RBM38	100	92.339	Labrus_bergylta
ENSMMOG00000020051	-	100	64.706	ENSLBEG00000018878	rbm38	98	64.286	Labrus_bergylta
ENSMMOG00000020051	-	100	76.639	ENSLOCG00000003456	rbm38	100	75.820	Lepisosteus_oculatus
ENSMMOG00000020051	-	98	68.220	ENSMFAG00000043808	RBM38	96	82.759	Macaca_fascicularis
ENSMMOG00000020051	-	99	67.647	ENSMMUG00000031391	RBM38	96	82.759	Macaca_mulatta
ENSMMOG00000020051	-	99	67.647	ENSMNEG00000034683	RBM38	96	82.759	Macaca_nemestrina
ENSMMOG00000020051	-	50	72.321	ENSMLEG00000043261	-	90	72.973	Mandrillus_leucophaeus
ENSMMOG00000020051	-	100	65.882	ENSMAMG00000024135	rbm38	98	63.889	Mastacembelus_armatus
ENSMMOG00000020051	-	100	93.852	ENSMAMG00000020499	RBM38	100	93.852	Mastacembelus_armatus
ENSMMOG00000020051	-	100	92.213	ENSMZEG00005000849	-	100	92.213	Maylandia_zebra
ENSMMOG00000020051	-	100	63.922	ENSMZEG00005026036	rbm38	98	63.492	Maylandia_zebra
ENSMMOG00000020051	-	97	68.966	ENSMAUG00000021211	Rbm38	95	67.100	Mesocricetus_auratus
ENSMMOG00000020051	-	90	70.833	ENSMICG00000038011	RBM38	98	70.233	Microcebus_murinus
ENSMMOG00000020051	-	96	68.122	ENSMOCG00000008715	Rbm38	94	66.228	Microtus_ochrogaster
ENSMMOG00000020051	-	99	67.089	ENSMODG00000016458	RBM38	99	66.525	Monodelphis_domestica
ENSMMOG00000020051	-	71	74.534	ENSMALG00000022327	rbm38	94	61.161	Monopterus_albus
ENSMMOG00000020051	-	82	97.297	ENSMALG00000004680	RBM38	72	96.825	Monopterus_albus
ENSMMOG00000020051	-	96	64.474	MGP_CAROLIEiJ_G0024745	Rbm38	94	67.105	Mus_caroli
ENSMMOG00000020051	-	96	64.474	ENSMUSG00000027510	Rbm38	94	67.105	Mus_musculus
ENSMMOG00000020051	-	97	63.675	MGP_PahariEiJ_G0026186	Rbm38	97	66.239	Mus_pahari
ENSMMOG00000020051	-	96	64.474	MGP_SPRETEiJ_G0025665	Rbm38	94	67.105	Mus_spretus
ENSMMOG00000020051	-	78	75.275	ENSMPUG00000006518	RBM38	94	72.917	Mustela_putorius_furo
ENSMMOG00000020051	-	90	69.302	ENSMLUG00000011140	RBM38	98	68.224	Myotis_lucifugus
ENSMMOG00000020051	-	100	92.623	ENSNBRG00000022545	-	100	92.623	Neolamprologus_brichardi
ENSMMOG00000020051	-	100	64.314	ENSNBRG00000022685	rbm38	98	63.889	Neolamprologus_brichardi
ENSMMOG00000020051	-	58	74.242	ENSMEUG00000005475	-	98	74.242	Notamacropus_eugenii
ENSMMOG00000020051	-	99	66.250	ENSODEG00000007980	RBM38	99	66.109	Octodon_degus
ENSMMOG00000020051	-	99	64.173	ENSONIG00000017073	rbm38	100	63.745	Oreochromis_niloticus
ENSMMOG00000020051	-	99	92.593	ENSONIG00000020324	-	100	92.593	Oreochromis_niloticus
ENSMMOG00000020051	-	95	68.919	ENSOANG00000009259	RBM38	85	67.873	Ornithorhynchus_anatinus
ENSMMOG00000020051	-	100	57.937	ENSORLG00000012154	rbm38	98	57.937	Oryzias_latipes
ENSMMOG00000020051	-	100	86.992	ENSORLG00000027180	-	100	87.805	Oryzias_latipes
ENSMMOG00000020051	-	100	86.992	ENSORLG00020020751	-	100	87.805	Oryzias_latipes_hni
ENSMMOG00000020051	-	100	58.824	ENSORLG00020017871	rbm38	98	58.730	Oryzias_latipes_hni
ENSMMOG00000020051	-	100	88.980	ENSORLG00015017040	-	100	88.980	Oryzias_latipes_hsok
ENSMMOG00000020051	-	100	59.375	ENSORLG00015012606	rbm38	98	58.730	Oryzias_latipes_hsok
ENSMMOG00000020051	-	100	90.984	ENSOMEG00000023912	-	100	90.984	Oryzias_melastigma
ENSMMOG00000020051	-	99	60.474	ENSOMEG00000006805	rbm38	98	60.400	Oryzias_melastigma
ENSMMOG00000020051	-	99	66.667	ENSOGAG00000029136	RBM38	99	66.529	Otolemur_garnettii
ENSMMOG00000020051	-	99	64.730	ENSPPRG00000009507	RBM38	96	79.661	Panthera_pardus
ENSMMOG00000020051	-	56	84.127	ENSPTRG00000045845	-	66	86.667	Pan_troglodytes
ENSMMOG00000020051	-	78	75.275	ENSPTRG00000013661	RBM38	96	82.759	Pan_troglodytes
ENSMMOG00000020051	-	99	67.647	ENSPANG00000020919	-	96	82.759	Papio_anubis
ENSMMOG00000020051	-	99	56.118	ENSPANG00000033127	-	100	55.932	Papio_anubis
ENSMMOG00000020051	-	100	73.279	ENSPKIG00000018122	-	95	90.991	Paramormyrops_kingsleyae
ENSMMOG00000020051	-	100	71.084	ENSPKIG00000025417	rbm38	100	71.084	Paramormyrops_kingsleyae
ENSMMOG00000020051	-	94	70.536	ENSPSIG00000011649	RBM38	93	68.610	Pelodiscus_sinensis
ENSMMOG00000020051	-	100	84.274	ENSPMGG00000017094	-	100	85.081	Periophthalmus_magnuspinnatus
ENSMMOG00000020051	-	99	63.600	ENSPMGG00000011343	rbm38	98	62.000	Periophthalmus_magnuspinnatus
ENSMMOG00000020051	-	99	66.807	ENSPCIG00000013648	RBM38	99	65.401	Phascolarctos_cinereus
ENSMMOG00000020051	-	100	58.661	ENSPFOG00000011658	rbm38	98	59.608	Poecilia_formosa
ENSMMOG00000020051	-	100	59.216	ENSPLAG00000005218	rbm38	98	59.608	Poecilia_latipinna
ENSMMOG00000020051	-	100	86.585	ENSPLAG00000002500	-	100	84.959	Poecilia_latipinna
ENSMMOG00000020051	-	100	58.268	ENSPMEG00000015770	rbm38	98	59.608	Poecilia_mexicana
ENSMMOG00000020051	-	100	58.661	ENSPREG00000007398	rbm38	98	59.608	Poecilia_reticulata
ENSMMOG00000020051	-	99	66.255	ENSPCOG00000026201	RBM38	86	87.850	Propithecus_coquereli
ENSMMOG00000020051	-	70	85.484	ENSPVAG00000006457	RBM38	66	85.484	Pteropus_vampyrus
ENSMMOG00000020051	-	100	63.529	ENSPNYG00000021373	rbm38	98	63.095	Pundamilia_nyererei
ENSMMOG00000020051	-	100	92.213	ENSPNYG00000019727	-	100	96.610	Pundamilia_nyererei
ENSMMOG00000020051	-	100	76.639	ENSPNAG00000015123	-	97	84.211	Pygocentrus_nattereri
ENSMMOG00000020051	-	96	72.340	ENSPNAG00000010596	rbm38	97	70.638	Pygocentrus_nattereri
ENSMMOG00000020051	-	96	67.249	ENSRNOG00000006420	Rbm38	94	67.105	Rattus_norvegicus
ENSMMOG00000020051	-	97	56.596	ENSRROG00000036388	-	97	55.745	Rhinopithecus_roxellana
ENSMMOG00000020051	-	90	71.296	ENSSBOG00000031053	RBM38	97	87.850	Saimiri_boliviensis_boliviensis
ENSMMOG00000020051	-	100	70.565	ENSSFOG00015004453	rbm38	100	73.279	Scleropages_formosus
ENSMMOG00000020051	-	100	95.082	ENSSDUG00000021082	RBM38	100	95.082	Seriola_dumerili
ENSMMOG00000020051	-	100	66.403	ENSSDUG00000022611	rbm38	98	65.873	Seriola_dumerili
ENSMMOG00000020051	-	100	95.902	ENSSLDG00000011778	RBM38	100	95.902	Seriola_lalandi_dorsalis
ENSMMOG00000020051	-	100	66.403	ENSSLDG00000010845	rbm38	93	71.233	Seriola_lalandi_dorsalis
ENSMMOG00000020051	-	100	94.672	ENSSPAG00000020989	RBM38	100	94.672	Stegastes_partitus
ENSMMOG00000020051	-	100	64.706	ENSSPAG00000011113	rbm38	98	64.286	Stegastes_partitus
ENSMMOG00000020051	-	99	66.109	ENSSSCG00000007504	RBM38	99	65.966	Sus_scrofa
ENSMMOG00000020051	-	98	65.041	ENSTRUG00000024954	rbm38	97	64.634	Takifugu_rubripes
ENSMMOG00000020051	-	100	91.837	ENSTRUG00000019869	-	100	91.837	Takifugu_rubripes
ENSMMOG00000020051	-	95	89.610	ENSTNIG00000007093	-	100	90.498	Tetraodon_nigroviridis
ENSMMOG00000020051	-	99	66.250	ENSUAMG00000019780	RBM38	99	67.083	Ursus_americanus
ENSMMOG00000020051	-	99	67.782	ENSVVUG00000017246	RBM38	99	67.782	Vulpes_vulpes
ENSMMOG00000020051	-	95	64.255	ENSXETG00000011268	rbm38	99	65.179	Xenopus_tropicalis
ENSMMOG00000020051	-	88	66.667	ENSXCOG00000017324	-	90	66.667	Xiphophorus_couchianus
ENSMMOG00000020051	-	100	60.159	ENSXMAG00000023662	rbm38	98	61.111	Xiphophorus_maculatus