EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000020243 (Gene tree)
Gene ID: -
Gene Symbol: ptcd1
Alias: wu:fi36d06
Full Name: pentatricopeptide repeat domain 1
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 12832 bases
Position: chrKV751348.1:13862587-13875418
Accession: ZDB-GENE-030131-6146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000026765	PPR	PF01535.20	1e-14	1	2
ENSMMOP00000026765	PPR	PF01535.20	1e-14	2	2
ENSMMOP00000026767	PPR	PF01535.20	5.3e-14	1	2
ENSMMOP00000026767	PPR	PF01535.20	5.3e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000027220	-	1929	-	ENSMMOP00000026765	642 (aa)	-	-
ENSMMOT00000027222	-	2154	-	ENSMMOP00000026767	717 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000020243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000020243's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000020243	ptcd1	88	47.700	ENSG00000106246	PTCD1	90	45.639	Homo_sapiens
ENSMMOG00000020243	ptcd1	88	47.700	ENSG00000248919	ATP5MF-PTCD1	84	45.639	Homo_sapiens
ENSMMOG00000020243	ptcd1	86	73.418	ENSAPOG00000010679	ptcd1	96	68.025	Acanthochromis_polyacanthus
ENSMMOG00000020243	ptcd1	91	47.635	ENSAMEG00000006224	-	85	45.646	Ailuropoda_melanoleuca
ENSMMOG00000020243	ptcd1	94	74.551	ENSACIG00000017861	ptcd1	98	71.134	Amphilophus_citrinellus
ENSMMOG00000020243	ptcd1	86	73.656	ENSAOCG00000022617	ptcd1	94	68.809	Amphiprion_ocellaris
ENSMMOG00000020243	ptcd1	99	67.639	ENSAOCG00000020741	-	100	67.639	Amphiprion_ocellaris
ENSMMOG00000020243	ptcd1	99	67.917	ENSAPEG00000022632	ptcd1	100	67.917	Amphiprion_percula
ENSMMOG00000020243	ptcd1	99	70.769	ENSATEG00000007016	ptcd1	99	70.629	Anabas_testudineus
ENSMMOG00000020243	ptcd1	87	48.969	ENSAPLG00000006862	-	90	48.969	Anas_platyrhynchos
ENSMMOG00000020243	ptcd1	90	48.167	ENSACAG00000012871	-	79	47.913	Anolis_carolinensis
ENSMMOG00000020243	ptcd1	91	45.968	ENSANAG00000035790	-	88	46.645	Aotus_nancymaae
ENSMMOG00000020243	ptcd1	99	69.241	ENSACLG00000002824	ptcd1	99	69.241	Astatotilapia_calliptera
ENSMMOG00000020243	ptcd1	88	51.645	ENSAMXG00000037292	ptcd1	90	49.691	Astyanax_mexicanus
ENSMMOG00000020243	ptcd1	92	45.719	ENSBTAG00000020440	-	76	46.204	Bos_taurus
ENSMMOG00000020243	ptcd1	88	47.708	ENSCJAG00000015815	-	89	45.946	Callithrix_jacchus
ENSMMOG00000020243	ptcd1	92	47.471	ENSCAFG00000015055	-	83	45.840	Canis_familiaris
ENSMMOG00000020243	ptcd1	92	47.308	ENSCAFG00020014480	-	83	45.840	Canis_lupus_dingo
ENSMMOG00000020243	ptcd1	93	46.764	ENSCHIG00000027000	-	90	45.370	Capra_hircus
ENSMMOG00000020243	ptcd1	88	47.157	ENSTSYG00000029495	-	86	46.743	Carlito_syrichta
ENSMMOG00000020243	ptcd1	91	46.549	ENSCAPG00000014660	-	94	46.388	Cavia_aperea
ENSMMOG00000020243	ptcd1	94	46.368	ENSCPOG00000001780	-	91	46.213	Cavia_porcellus
ENSMMOG00000020243	ptcd1	88	47.039	ENSCCAG00000034025	-	89	45.325	Cebus_capucinus
ENSMMOG00000020243	ptcd1	88	48.294	ENSCATG00000040859	-	87	46.982	Cercocebus_atys
ENSMMOG00000020243	ptcd1	88	48.229	ENSCLAG00000006354	-	86	47.258	Chinchilla_lanigera
ENSMMOG00000020243	ptcd1	83	47.943	ENSCSAG00000017794	-	83	47.711	Chlorocebus_sabaeus
ENSMMOG00000020243	ptcd1	88	46.916	ENSCPBG00000020866	-	86	45.609	Chrysemys_picta_bellii
ENSMMOG00000020243	ptcd1	91	47.525	ENSCANG00000023441	-	84	47.739	Colobus_angolensis_palliatus
ENSMMOG00000020243	ptcd1	91	47.213	ENSCGRG00001023686	Ptcd1	86	47.377	Cricetulus_griseus_chok1gshd
ENSMMOG00000020243	ptcd1	91	47.213	ENSCGRG00000015031	Ptcd1	86	47.377	Cricetulus_griseus_crigri
ENSMMOG00000020243	ptcd1	98	58.759	ENSCSEG00000002378	ptcd1	99	58.759	Cynoglossus_semilaevis
ENSMMOG00000020243	ptcd1	89	72.097	ENSCVAG00000003621	ptcd1	97	65.507	Cyprinodon_variegatus
ENSMMOG00000020243	ptcd1	99	66.292	ENSCVAG00000015826	ptcd1	99	66.104	Cyprinodon_variegatus
ENSMMOG00000020243	ptcd1	99	48.503	ENSDARG00000076176	ptcd1	94	48.353	Danio_rerio
ENSMMOG00000020243	ptcd1	88	47.797	ENSDNOG00000009957	-	84	47.525	Dasypus_novemcinctus
ENSMMOG00000020243	ptcd1	88	46.912	ENSDORG00000000740	Ptcd1	88	46.314	Dipodomys_ordii
ENSMMOG00000020243	ptcd1	93	38.763	ENSEBUG00000014515	ptcd1	96	37.747	Eptatretus_burgeri
ENSMMOG00000020243	ptcd1	91	46.916	ENSEASG00005002480	-	85	47.712	Equus_asinus_asinus
ENSMMOG00000020243	ptcd1	94	46.299	ENSECAG00000016617	-	88	47.302	Equus_caballus
ENSMMOG00000020243	ptcd1	94	56.832	ENSELUG00000016517	ptcd1	99	52.708	Esox_lucius
ENSMMOG00000020243	ptcd1	92	47.883	ENSFCAG00000015069	-	88	46.845	Felis_catus
ENSMMOG00000020243	ptcd1	87	48.223	ENSFALG00000013803	-	86	47.411	Ficedula_albicollis
ENSMMOG00000020243	ptcd1	91	47.049	ENSFDAG00000006393	-	85	47.030	Fukomys_damarensis
ENSMMOG00000020243	ptcd1	80	73.114	ENSFHEG00000012491	ptcd1	96	72.072	Fundulus_heteroclitus
ENSMMOG00000020243	ptcd1	89	61.993	ENSGMOG00000007639	ptcd1	100	60.377	Gadus_morhua
ENSMMOG00000020243	ptcd1	87	47.475	ENSGALG00000004711	-	83	47.475	Gallus_gallus
ENSMMOG00000020243	ptcd1	89	72.539	ENSGAFG00000013175	ptcd1	90	69.592	Gambusia_affinis
ENSMMOG00000020243	ptcd1	91	73.854	ENSGACG00000016607	ptcd1	98	72.627	Gasterosteus_aculeatus
ENSMMOG00000020243	ptcd1	85	47.735	ENSGAGG00000021832	-	85	47.423	Gopherus_agassizii
ENSMMOG00000020243	ptcd1	88	47.959	ENSGGOG00000015123	-	90	45.879	Gorilla_gorilla
ENSMMOG00000020243	ptcd1	99	69.456	ENSHBUG00000018275	ptcd1	99	69.456	Haplochromis_burtoni
ENSMMOG00000020243	ptcd1	90	47.967	ENSHGLG00000017621	-	88	47.702	Heterocephalus_glaber_female
ENSMMOG00000020243	ptcd1	90	47.967	ENSHGLG00100007218	-	88	47.702	Heterocephalus_glaber_male
ENSMMOG00000020243	ptcd1	99	56.311	ENSHCOG00000010784	ptcd1	99	56.768	Hippocampus_comes
ENSMMOG00000020243	ptcd1	93	47.419	ENSSTOG00000001682	-	89	46.541	Ictidomys_tridecemlineatus
ENSMMOG00000020243	ptcd1	92	46.709	ENSJJAG00000000319	Ptcd1	88	47.078	Jaculus_jaculus
ENSMMOG00000020243	ptcd1	95	70.759	ENSKMAG00000008708	ptcd1	98	66.760	Kryptolebias_marmoratus
ENSMMOG00000020243	ptcd1	99	67.967	ENSLBEG00000008061	ptcd1	99	68.663	Labrus_bergylta
ENSMMOG00000020243	ptcd1	88	50.862	ENSLACG00000011172	ptcd1	82	50.600	Latimeria_chalumnae
ENSMMOG00000020243	ptcd1	93	51.246	ENSLOCG00000004833	ptcd1	94	50.577	Lepisosteus_oculatus
ENSMMOG00000020243	ptcd1	90	46.798	ENSLAFG00000002588	-	89	45.024	Loxodonta_africana
ENSMMOG00000020243	ptcd1	88	48.464	ENSMFAG00000041324	-	87	47.145	Macaca_fascicularis
ENSMMOG00000020243	ptcd1	88	48.294	ENSMMUG00000030408	-	87	46.982	Macaca_mulatta
ENSMMOG00000020243	ptcd1	88	48.976	ENSMNEG00000043786	-	87	47.635	Macaca_nemestrina
ENSMMOG00000020243	ptcd1	88	37.262	ENSMLEG00000031179	-	85	37.313	Mandrillus_leucophaeus
ENSMMOG00000020243	ptcd1	99	68.828	ENSMAMG00000007623	ptcd1	98	68.690	Mastacembelus_armatus
ENSMMOG00000020243	ptcd1	99	68.828	ENSMZEG00005012722	ptcd1	99	68.828	Maylandia_zebra
ENSMMOG00000020243	ptcd1	97	45.030	ENSMGAG00000004211	-	88	45.030	Meleagris_gallopavo
ENSMMOG00000020243	ptcd1	92	45.177	ENSMICG00000017428	-	87	45.820	Microcebus_murinus
ENSMMOG00000020243	ptcd1	88	47.107	ENSMODG00000001350	-	85	45.383	Monodelphis_domestica
ENSMMOG00000020243	ptcd1	98	71.763	ENSMALG00000018442	ptcd1	99	68.913	Monopterus_albus
ENSMMOG00000020243	ptcd1	91	47.368	MGP_CAROLIEiJ_G0028011	Ptcd1	87	47.533	Mus_caroli
ENSMMOG00000020243	ptcd1	91	46.470	ENSMUSG00000029624	Ptcd1	87	46.721	Mus_musculus
ENSMMOG00000020243	ptcd1	92	48.033	MGP_PahariEiJ_G0024580	Ptcd1	87	48.197	Mus_pahari
ENSMMOG00000020243	ptcd1	91	46.634	MGP_SPRETEiJ_G0029012	Ptcd1	87	46.798	Mus_spretus
ENSMMOG00000020243	ptcd1	90	47.430	ENSMPUG00000016518	-	89	46.202	Mustela_putorius_furo
ENSMMOG00000020243	ptcd1	88	48.557	ENSMLUG00000010994	-	80	48.026	Myotis_lucifugus
ENSMMOG00000020243	ptcd1	94	71.732	ENSNBRG00000010079	ptcd1	96	69.265	Neolamprologus_brichardi
ENSMMOG00000020243	ptcd1	78	46.476	ENSNLEG00000011060	-	87	46.476	Nomascus_leucogenys
ENSMMOG00000020243	ptcd1	90	46.040	ENSMEUG00000006930	-	88	44.164	Notamacropus_eugenii
ENSMMOG00000020243	ptcd1	80	54.962	ENSOPRG00000013647	-	75	54.962	Ochotona_princeps
ENSMMOG00000020243	ptcd1	90	70.169	ENSONIG00000003168	ptcd1	100	69.722	Oreochromis_niloticus
ENSMMOG00000020243	ptcd1	88	46.555	ENSOANG00000007728	-	77	46.206	Ornithorhynchus_anatinus
ENSMMOG00000020243	ptcd1	88	48.893	ENSOCUG00000010584	-	86	46.965	Oryctolagus_cuniculus
ENSMMOG00000020243	ptcd1	94	68.914	ENSORLG00000009275	ptcd1	99	63.948	Oryzias_latipes
ENSMMOG00000020243	ptcd1	94	69.243	ENSORLG00020000988	ptcd1	98	64.971	Oryzias_latipes_hni
ENSMMOG00000020243	ptcd1	94	68.586	ENSORLG00015010557	ptcd1	97	64.714	Oryzias_latipes_hsok
ENSMMOG00000020243	ptcd1	92	71.669	ENSOMEG00000020627	ptcd1	99	65.657	Oryzias_melastigma
ENSMMOG00000020243	ptcd1	89	45.757	ENSOGAG00000010877	-	87	45.663	Otolemur_garnettii
ENSMMOG00000020243	ptcd1	93	42.587	ENSOARG00000018676	-	99	39.227	Ovis_aries
ENSMMOG00000020243	ptcd1	88	47.797	ENSPPAG00000036024	-	90	45.736	Pan_paniscus
ENSMMOG00000020243	ptcd1	92	47.720	ENSPPRG00000003478	-	89	46.761	Panthera_pardus
ENSMMOG00000020243	ptcd1	88	47.966	ENSPTRG00000019452	-	90	46.047	Pan_troglodytes
ENSMMOG00000020243	ptcd1	88	48.805	ENSPANG00000016730	-	87	47.471	Papio_anubis
ENSMMOG00000020243	ptcd1	88	51.635	ENSPKIG00000014215	ptcd1	86	51.933	Paramormyrops_kingsleyae
ENSMMOG00000020243	ptcd1	87	47.251	ENSPSIG00000011184	-	98	47.359	Pelodiscus_sinensis
ENSMMOG00000020243	ptcd1	78	40.454	ENSPMAG00000009667	ptcd1	100	40.454	Petromyzon_marinus
ENSMMOG00000020243	ptcd1	88	46.612	ENSPCIG00000024778	-	81	46.612	Phascolarctos_cinereus
ENSMMOG00000020243	ptcd1	94	70.147	ENSPFOG00000004458	ptcd1	99	64.286	Poecilia_formosa
ENSMMOG00000020243	ptcd1	99	63.961	ENSPLAG00000011051	ptcd1	99	64.374	Poecilia_latipinna
ENSMMOG00000020243	ptcd1	94	70.636	ENSPMEG00000020547	ptcd1	99	64.779	Poecilia_mexicana
ENSMMOG00000020243	ptcd1	98	63.004	ENSPREG00000000059	ptcd1	99	63.245	Poecilia_reticulata
ENSMMOG00000020243	ptcd1	89	46.912	ENSPPYG00000017377	-	93	46.178	Pongo_abelii
ENSMMOG00000020243	ptcd1	79	57.143	ENSPCAG00000001852	-	81	55.556	Procavia_capensis
ENSMMOG00000020243	ptcd1	96	44.717	ENSPCOG00000018596	-	91	45.370	Propithecus_coquereli
ENSMMOG00000020243	ptcd1	58	55.714	ENSPVAG00000007529	-	62	53.177	Pteropus_vampyrus
ENSMMOG00000020243	ptcd1	99	68.966	ENSPNYG00000019993	ptcd1	99	68.966	Pundamilia_nyererei
ENSMMOG00000020243	ptcd1	91	52.649	ENSPNAG00000014931	ptcd1	92	50.228	Pygocentrus_nattereri
ENSMMOG00000020243	ptcd1	88	47.692	ENSRNOG00000000987	Ptcd1	91	45.886	Rattus_norvegicus
ENSMMOG00000020243	ptcd1	91	47.611	ENSRBIG00000043393	-	84	47.826	Rhinopithecus_bieti
ENSMMOG00000020243	ptcd1	89	47.826	ENSRROG00000036420	-	84	47.826	Rhinopithecus_roxellana
ENSMMOG00000020243	ptcd1	94	45.787	ENSSBOG00000024114	-	89	45.946	Saimiri_boliviensis_boliviensis
ENSMMOG00000020243	ptcd1	87	46.644	ENSSHAG00000011376	-	88	46.644	Sarcophilus_harrisii
ENSMMOG00000020243	ptcd1	95	52.441	ENSSFOG00015007909	ptcd1	87	51.310	Scleropages_formosus
ENSMMOG00000020243	ptcd1	90	68.243	ENSSMAG00000000218	ptcd1	98	67.675	Scophthalmus_maximus
ENSMMOG00000020243	ptcd1	99	71.605	ENSSDUG00000015671	ptcd1	99	71.306	Seriola_dumerili
ENSMMOG00000020243	ptcd1	94	72.698	ENSSLDG00000014261	ptcd1	99	68.966	Seriola_lalandi_dorsalis
ENSMMOG00000020243	ptcd1	91	46.624	ENSSPUG00000003540	-	84	46.850	Sphenodon_punctatus
ENSMMOG00000020243	ptcd1	99	69.304	ENSSPAG00000011049	ptcd1	99	69.304	Stegastes_partitus
ENSMMOG00000020243	ptcd1	88	48.810	ENSSSCG00000007622	-	88	48.822	Sus_scrofa
ENSMMOG00000020243	ptcd1	87	48.282	ENSTGUG00000007563	-	94	48.625	Taeniopygia_guttata
ENSMMOG00000020243	ptcd1	95	72.831	ENSTRUG00000013471	ptcd1	97	69.405	Takifugu_rubripes
ENSMMOG00000020243	ptcd1	94	72.112	ENSTNIG00000008271	ptcd1	99	68.175	Tetraodon_nigroviridis
ENSMMOG00000020243	ptcd1	88	47.475	ENSTBEG00000011021	-	84	47.475	Tupaia_belangeri
ENSMMOG00000020243	ptcd1	92	47.240	ENSTTRG00000003006	-	87	47.078	Tursiops_truncatus
ENSMMOG00000020243	ptcd1	92	46.290	ENSUAMG00000008049	-	86	46.290	Ursus_americanus
ENSMMOG00000020243	ptcd1	92	47.557	ENSVVUG00000008836	-	90	45.925	Vulpes_vulpes
ENSMMOG00000020243	ptcd1	88	47.423	ENSXETG00000009891	ptcd1	84	47.423	Xenopus_tropicalis
ENSMMOG00000020243	ptcd1	94	70.724	ENSXMAG00000015540	ptcd1	99	64.138	Xiphophorus_maculatus