EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000020303 (Gene tree)
Gene ID: -
Gene Symbol: srp54
Alias: zgc:55842|zgc:85713
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 3815 bases
Position: chrKV751373.1:2594067-2597881
Accession: ZDB-GENE-040426-818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000026844	SRP54	PF00448.22	5.1e-72	1	1
ENSMMOP00000026844	SRP54_N	PF02881.19	3.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000027300	-	1377	-	ENSMMOP00000026844	458 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000020303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000020303's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000020303	srp54	98	94.183	ENSG00000100883	SRP54	100	97.674	Homo_sapiens
ENSMMOG00000020303	srp54	99	97.137	ENSAPOG00000011314	srp54	90	97.137	Acanthochromis_polyacanthus
ENSMMOG00000020303	srp54	98	94.183	ENSAMEG00000015544	SRP54	89	94.183	Ailuropoda_melanoleuca
ENSMMOG00000020303	srp54	97	97.753	ENSACIG00000022831	srp54	96	97.753	Amphilophus_citrinellus
ENSMMOG00000020303	srp54	99	97.137	ENSAOCG00000019401	srp54	90	97.137	Amphiprion_ocellaris
ENSMMOG00000020303	srp54	99	97.137	ENSAPEG00000001977	srp54	90	97.137	Amphiprion_percula
ENSMMOG00000020303	srp54	99	96.696	ENSATEG00000013877	srp54	90	96.696	Anabas_testudineus
ENSMMOG00000020303	srp54	99	92.511	ENSAPLG00000010125	SRP54	91	92.511	Anas_platyrhynchos
ENSMMOG00000020303	srp54	83	88.021	ENSACAG00000010631	-	88	88.021	Anolis_carolinensis
ENSMMOG00000020303	srp54	60	75.986	ENSACAG00000001124	-	84	75.986	Anolis_carolinensis
ENSMMOG00000020303	srp54	99	92.070	ENSACAG00000002103	-	90	92.070	Anolis_carolinensis
ENSMMOG00000020303	srp54	98	94.183	ENSANAG00000022133	SRP54	89	94.183	Aotus_nancymaae
ENSMMOG00000020303	srp54	99	96.916	ENSACLG00000015866	srp54	90	96.916	Astatotilapia_calliptera
ENSMMOG00000020303	srp54	99	94.934	ENSAMXG00000032669	SRP54	90	94.934	Astyanax_mexicanus
ENSMMOG00000020303	srp54	98	94.183	ENSBTAG00000019085	SRP54	89	94.183	Bos_taurus
ENSMMOG00000020303	srp54	98	72.000	WBGene00009012	F21D5.7	91	72.000	Caenorhabditis_elegans
ENSMMOG00000020303	srp54	98	94.183	ENSCJAG00000006581	SRP54	89	94.183	Callithrix_jacchus
ENSMMOG00000020303	srp54	98	94.183	ENSCAFG00000013331	SRP54	89	94.183	Canis_familiaris
ENSMMOG00000020303	srp54	98	94.183	ENSCAFG00020023427	SRP54	89	94.183	Canis_lupus_dingo
ENSMMOG00000020303	srp54	98	94.183	ENSCHIG00000026345	SRP54	89	94.183	Capra_hircus
ENSMMOG00000020303	srp54	98	83.445	ENSTSYG00000035333	-	88	83.445	Carlito_syrichta
ENSMMOG00000020303	srp54	98	93.960	ENSTSYG00000002680	-	89	93.960	Carlito_syrichta
ENSMMOG00000020303	srp54	84	66.334	ENSCAPG00000008780	SRP54	84	66.334	Cavia_aperea
ENSMMOG00000020303	srp54	98	93.736	ENSCPOG00000003691	SRP54	89	93.736	Cavia_porcellus
ENSMMOG00000020303	srp54	86	93.113	ENSCCAG00000024179	SRP54	87	93.113	Cebus_capucinus
ENSMMOG00000020303	srp54	98	94.183	ENSCATG00000034083	SRP54	89	94.183	Cercocebus_atys
ENSMMOG00000020303	srp54	98	94.183	ENSCLAG00000015076	SRP54	89	94.183	Chinchilla_lanigera
ENSMMOG00000020303	srp54	98	94.183	ENSCSAG00000015575	SRP54	89	94.183	Chlorocebus_sabaeus
ENSMMOG00000020303	srp54	98	82.774	ENSCHOG00000008986	SRP54	93	82.774	Choloepus_hoffmanni
ENSMMOG00000020303	srp54	99	92.731	ENSCPBG00000026195	SRP54	90	92.731	Chrysemys_picta_bellii
ENSMMOG00000020303	srp54	99	82.379	ENSCING00000007380	-	90	82.379	Ciona_intestinalis
ENSMMOG00000020303	srp54	98	94.183	ENSCANG00000028532	SRP54	89	94.183	Colobus_angolensis_palliatus
ENSMMOG00000020303	srp54	98	94.183	ENSCGRG00001009525	-	89	94.183	Cricetulus_griseus_chok1gshd
ENSMMOG00000020303	srp54	84	94.805	ENSCGRG00000009453	-	89	94.805	Cricetulus_griseus_crigri
ENSMMOG00000020303	srp54	99	96.476	ENSCSEG00000012392	srp54	90	96.476	Cynoglossus_semilaevis
ENSMMOG00000020303	srp54	99	96.696	ENSCVAG00000010395	srp54	90	96.696	Cyprinodon_variegatus
ENSMMOG00000020303	srp54	99	95.815	ENSDARG00000098367	srp54	90	95.815	Danio_rerio
ENSMMOG00000020303	srp54	98	94.183	ENSDNOG00000032525	SRP54	89	94.183	Dasypus_novemcinctus
ENSMMOG00000020303	srp54	98	79.911	ENSDORG00000005159	-	97	79.911	Dipodomys_ordii
ENSMMOG00000020303	srp54	99	77.313	FBgn0010747	Srp54k	89	77.313	Drosophila_melanogaster
ENSMMOG00000020303	srp54	98	92.841	ENSETEG00000016307	-	89	92.841	Echinops_telfairi
ENSMMOG00000020303	srp54	79	53.591	ENSETEG00000012102	-	85	53.591	Echinops_telfairi
ENSMMOG00000020303	srp54	98	89.262	ENSEBUG00000009437	-	89	89.262	Eptatretus_burgeri
ENSMMOG00000020303	srp54	98	94.183	ENSEASG00005002057	SRP54	89	94.183	Equus_asinus_asinus
ENSMMOG00000020303	srp54	98	94.183	ENSECAG00000018042	SRP54	88	94.183	Equus_caballus
ENSMMOG00000020303	srp54	98	76.510	ENSEEUG00000001511	SRP54	89	76.510	Erinaceus_europaeus
ENSMMOG00000020303	srp54	99	95.154	ENSELUG00000003395	srp54	90	95.154	Esox_lucius
ENSMMOG00000020303	srp54	98	93.960	ENSFCAG00000032033	SRP54	89	93.960	Felis_catus
ENSMMOG00000020303	srp54	99	92.511	ENSFALG00000005995	SRP54	90	92.511	Ficedula_albicollis
ENSMMOG00000020303	srp54	98	94.183	ENSFDAG00000016767	SRP54	90	94.183	Fukomys_damarensis
ENSMMOG00000020303	srp54	99	96.916	ENSFHEG00000004263	srp54	97	92.731	Fundulus_heteroclitus
ENSMMOG00000020303	srp54	93	89.252	ENSGMOG00000011391	srp54	90	89.252	Gadus_morhua
ENSMMOG00000020303	srp54	99	92.511	ENSGALG00000023135	SRP54	90	92.511	Gallus_gallus
ENSMMOG00000020303	srp54	99	96.916	ENSGAFG00000011586	srp54	90	96.916	Gambusia_affinis
ENSMMOG00000020303	srp54	99	96.256	ENSGACG00000004181	srp54	100	97.696	Gasterosteus_aculeatus
ENSMMOG00000020303	srp54	99	92.731	ENSGAGG00000014766	SRP54	90	92.731	Gopherus_agassizii
ENSMMOG00000020303	srp54	98	94.183	ENSGGOG00000002926	SRP54	89	94.183	Gorilla_gorilla
ENSMMOG00000020303	srp54	99	96.916	ENSHBUG00000005678	srp54	90	96.916	Haplochromis_burtoni
ENSMMOG00000020303	srp54	98	94.183	ENSHGLG00000002850	SRP54	89	94.183	Heterocephalus_glaber_female
ENSMMOG00000020303	srp54	98	94.183	ENSHGLG00100005263	SRP54	89	94.183	Heterocephalus_glaber_male
ENSMMOG00000020303	srp54	98	64.509	ENSHGLG00100007281	-	88	64.509	Heterocephalus_glaber_male
ENSMMOG00000020303	srp54	99	94.934	ENSHCOG00000021127	srp54	90	94.934	Hippocampus_comes
ENSMMOG00000020303	srp54	99	94.934	ENSIPUG00000001420	srp54	90	94.934	Ictalurus_punctatus
ENSMMOG00000020303	srp54	98	94.183	ENSSTOG00000016023	SRP54	89	94.183	Ictidomys_tridecemlineatus
ENSMMOG00000020303	srp54	98	88.814	ENSJJAG00000013417	-	88	88.814	Jaculus_jaculus
ENSMMOG00000020303	srp54	84	70.235	ENSJJAG00000016404	-	84	70.235	Jaculus_jaculus
ENSMMOG00000020303	srp54	99	96.256	ENSKMAG00000007707	srp54	90	96.256	Kryptolebias_marmoratus
ENSMMOG00000020303	srp54	99	97.137	ENSLBEG00000018690	srp54	90	97.137	Labrus_bergylta
ENSMMOG00000020303	srp54	99	97.137	ENSLBEG00000021122	srp54	90	97.137	Labrus_bergylta
ENSMMOG00000020303	srp54	99	92.952	ENSLACG00000017890	SRP54	90	92.952	Latimeria_chalumnae
ENSMMOG00000020303	srp54	99	95.154	ENSLOCG00000009440	srp54	90	95.154	Lepisosteus_oculatus
ENSMMOG00000020303	srp54	98	94.183	ENSLAFG00000012007	SRP54	89	94.183	Loxodonta_africana
ENSMMOG00000020303	srp54	98	94.183	ENSMFAG00000044371	SRP54	89	94.183	Macaca_fascicularis
ENSMMOG00000020303	srp54	98	94.183	ENSMMUG00000015073	FAM177A1	89	94.183	Macaca_mulatta
ENSMMOG00000020303	srp54	98	94.183	ENSMNEG00000006947	SRP54	89	94.183	Macaca_nemestrina
ENSMMOG00000020303	srp54	98	94.183	ENSMLEG00000042251	SRP54	89	94.183	Mandrillus_leucophaeus
ENSMMOG00000020303	srp54	99	96.916	ENSMAMG00000004803	srp54	90	96.916	Mastacembelus_armatus
ENSMMOG00000020303	srp54	99	96.916	ENSMZEG00005027528	srp54	90	96.916	Maylandia_zebra
ENSMMOG00000020303	srp54	99	87.500	ENSMGAG00000012481	SRP54	90	87.500	Meleagris_gallopavo
ENSMMOG00000020303	srp54	98	94.407	ENSMAUG00000014447	-	89	94.407	Mesocricetus_auratus
ENSMMOG00000020303	srp54	98	94.183	ENSMICG00000010270	SRP54	89	94.183	Microcebus_murinus
ENSMMOG00000020303	srp54	84	93.734	ENSMOCG00000000948	-	87	93.734	Microtus_ochrogaster
ENSMMOG00000020303	srp54	98	94.183	ENSMODG00000023150	-	89	94.183	Monodelphis_domestica
ENSMMOG00000020303	srp54	98	94.183	ENSMODG00000012925	-	89	94.183	Monodelphis_domestica
ENSMMOG00000020303	srp54	98	97.105	ENSMALG00000009163	srp54	99	97.105	Monopterus_albus
ENSMMOG00000020303	srp54	98	94.407	MGP_CAROLIEiJ_G0017754	-	89	94.407	Mus_caroli
ENSMMOG00000020303	srp54	98	93.512	ENSMUSG00000079108	Srp54c	89	93.512	Mus_musculus
ENSMMOG00000020303	srp54	98	94.407	ENSMUSG00000073079	Srp54a	100	97.273	Mus_musculus
ENSMMOG00000020303	srp54	98	94.407	ENSMUSG00000112449	Srp54b	92	92.857	Mus_musculus
ENSMMOG00000020303	srp54	98	94.407	MGP_PahariEiJ_G0029510	-	89	94.407	Mus_pahari
ENSMMOG00000020303	srp54	98	94.183	ENSMPUG00000016302	SRP54	89	94.183	Mustela_putorius_furo
ENSMMOG00000020303	srp54	98	93.512	ENSMLUG00000008958	SRP54	89	93.512	Myotis_lucifugus
ENSMMOG00000020303	srp54	98	83.893	ENSNGAG00000019806	-	87	83.893	Nannospalax_galili
ENSMMOG00000020303	srp54	85	96.410	ENSNBRG00000006000	srp54	89	96.410	Neolamprologus_brichardi
ENSMMOG00000020303	srp54	98	94.183	ENSNLEG00000003496	SRP54	89	94.183	Nomascus_leucogenys
ENSMMOG00000020303	srp54	73	98.214	ENSMEUG00000000138	-	76	98.214	Notamacropus_eugenii
ENSMMOG00000020303	srp54	98	94.183	ENSODEG00000004865	SRP54	89	94.183	Octodon_degus
ENSMMOG00000020303	srp54	99	96.916	ENSONIG00000011768	srp54	90	96.916	Oreochromis_niloticus
ENSMMOG00000020303	srp54	98	94.183	ENSOANG00000014051	SRP54	89	94.183	Ornithorhynchus_anatinus
ENSMMOG00000020303	srp54	98	94.183	ENSOCUG00000007838	SRP54	89	94.183	Oryctolagus_cuniculus
ENSMMOG00000020303	srp54	99	96.696	ENSORLG00000010027	srp54	90	96.696	Oryzias_latipes
ENSMMOG00000020303	srp54	99	96.696	ENSORLG00020001878	srp54	90	96.696	Oryzias_latipes_hni
ENSMMOG00000020303	srp54	99	96.696	ENSORLG00015021866	srp54	90	96.696	Oryzias_latipes_hsok
ENSMMOG00000020303	srp54	99	96.476	ENSOMEG00000020952	srp54	90	96.476	Oryzias_melastigma
ENSMMOG00000020303	srp54	98	94.183	ENSOGAG00000012188	SRP54	89	94.183	Otolemur_garnettii
ENSMMOG00000020303	srp54	98	94.183	ENSOARG00000007160	SRP54	89	94.183	Ovis_aries
ENSMMOG00000020303	srp54	98	94.183	ENSPPAG00000017434	SRP54	89	94.183	Pan_paniscus
ENSMMOG00000020303	srp54	98	93.065	ENSPPRG00000014047	SRP54	89	93.065	Panthera_pardus
ENSMMOG00000020303	srp54	98	93.960	ENSPTIG00000000744	SRP54	85	93.960	Panthera_tigris_altaica
ENSMMOG00000020303	srp54	98	94.183	ENSPTRG00000006259	FAM177A1	89	94.183	Pan_troglodytes
ENSMMOG00000020303	srp54	98	94.183	ENSPANG00000023853	SRP54	89	94.183	Papio_anubis
ENSMMOG00000020303	srp54	99	95.154	ENSPKIG00000001953	srp54	90	95.154	Paramormyrops_kingsleyae
ENSMMOG00000020303	srp54	99	92.731	ENSPSIG00000006476	SRP54	90	92.731	Pelodiscus_sinensis
ENSMMOG00000020303	srp54	97	98.202	ENSPMGG00000004127	srp54	97	98.202	Periophthalmus_magnuspinnatus
ENSMMOG00000020303	srp54	97	82.619	ENSPEMG00000019634	-	93	79.458	Peromyscus_maniculatus_bairdii
ENSMMOG00000020303	srp54	98	91.275	ENSPMAG00000006078	-	89	91.275	Petromyzon_marinus
ENSMMOG00000020303	srp54	98	94.183	ENSPCIG00000016175	SRP54	89	94.183	Phascolarctos_cinereus
ENSMMOG00000020303	srp54	99	96.916	ENSPFOG00000008870	srp54	90	96.916	Poecilia_formosa
ENSMMOG00000020303	srp54	99	96.916	ENSPLAG00000009889	srp54	90	96.916	Poecilia_latipinna
ENSMMOG00000020303	srp54	99	96.916	ENSPMEG00000008601	srp54	90	96.916	Poecilia_mexicana
ENSMMOG00000020303	srp54	99	96.916	ENSPREG00000004505	srp54	90	96.916	Poecilia_reticulata
ENSMMOG00000020303	srp54	98	88.591	ENSPPYG00000005739	SRP54	89	88.591	Pongo_abelii
ENSMMOG00000020303	srp54	98	90.157	ENSPCAG00000006268	SRP54	89	90.157	Procavia_capensis
ENSMMOG00000020303	srp54	98	91.964	ENSPCOG00000022473	SRP54	89	91.964	Propithecus_coquereli
ENSMMOG00000020303	srp54	69	97.872	ENSPVAG00000010056	SRP54	82	97.872	Pteropus_vampyrus
ENSMMOG00000020303	srp54	99	96.916	ENSPNYG00000009717	srp54	90	96.916	Pundamilia_nyererei
ENSMMOG00000020303	srp54	99	95.154	ENSPNAG00000008544	srp54	90	95.154	Pygocentrus_nattereri
ENSMMOG00000020303	srp54	98	94.183	ENSRNOG00000032776	Srp54a	89	94.183	Rattus_norvegicus
ENSMMOG00000020303	srp54	98	94.183	ENSRROG00000041292	SRP54	89	94.183	Rhinopithecus_roxellana
ENSMMOG00000020303	srp54	94	50.567	YPR088C	SRP54	81	50.567	Saccharomyces_cerevisiae
ENSMMOG00000020303	srp54	93	92.941	ENSSBOG00000035145	SRP54	88	93.765	Saimiri_boliviensis_boliviensis
ENSMMOG00000020303	srp54	62	93.706	ENSSHAG00000000671	SRP54	83	93.706	Sarcophilus_harrisii
ENSMMOG00000020303	srp54	99	95.374	ENSSFOG00015013920	srp54	90	95.374	Scleropages_formosus
ENSMMOG00000020303	srp54	99	96.256	ENSSMAG00000002441	srp54	85	96.256	Scophthalmus_maximus
ENSMMOG00000020303	srp54	99	96.476	ENSSDUG00000018586	srp54	90	96.476	Seriola_dumerili
ENSMMOG00000020303	srp54	99	96.696	ENSSLDG00000010476	srp54	90	96.696	Seriola_lalandi_dorsalis
ENSMMOG00000020303	srp54	98	94.183	ENSSARG00000002744	SRP54	89	94.183	Sorex_araneus
ENSMMOG00000020303	srp54	99	92.731	ENSSPUG00000013101	SRP54	90	92.731	Sphenodon_punctatus
ENSMMOG00000020303	srp54	99	97.137	ENSSPAG00000002354	srp54	90	97.137	Stegastes_partitus
ENSMMOG00000020303	srp54	98	94.183	ENSSSCG00000001955	SRP54	89	94.183	Sus_scrofa
ENSMMOG00000020303	srp54	99	92.511	ENSTGUG00000011945	-	91	92.511	Taeniopygia_guttata
ENSMMOG00000020303	srp54	99	96.256	ENSTRUG00000007057	srp54	90	96.256	Takifugu_rubripes
ENSMMOG00000020303	srp54	99	95.595	ENSTNIG00000002589	srp54	90	95.595	Tetraodon_nigroviridis
ENSMMOG00000020303	srp54	85	83.846	ENSTBEG00000011409	SRP54	87	83.846	Tupaia_belangeri
ENSMMOG00000020303	srp54	98	83.893	ENSTTRG00000000928	SRP54	89	83.893	Tursiops_truncatus
ENSMMOG00000020303	srp54	57	94.656	ENSUAMG00000012385	SRP54	100	94.656	Ursus_americanus
ENSMMOG00000020303	srp54	98	94.183	ENSUMAG00000011234	SRP54	89	94.183	Ursus_maritimus
ENSMMOG00000020303	srp54	98	93.960	ENSVPAG00000005668	SRP54	94	93.960	Vicugna_pacos
ENSMMOG00000020303	srp54	98	94.183	ENSVVUG00000019962	SRP54	89	94.183	Vulpes_vulpes
ENSMMOG00000020303	srp54	99	76.304	ENSXETG00000012290	srp54	90	76.840	Xenopus_tropicalis
ENSMMOG00000020303	srp54	97	98.420	ENSXCOG00000004658	srp54	96	98.420	Xiphophorus_couchianus
ENSMMOG00000020303	srp54	99	96.916	ENSXMAG00000018315	srp54	90	96.916	Xiphophorus_maculatus