EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000020474 (Gene tree)
Gene ID: -
Gene Symbol: sf1
Alias: wu:fc09f06|znf162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 12562 bases
Position: chrKV751349.1:797198-809759
Accession: ZDB-GENE-030131-2492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000027069	zf-CCHC	PF00098.23	0.0004	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000027533	-	1960	-	ENSMMOP00000027069	653 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000020474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000020474's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000020474	sf1	87	89.304	ENSAPOG00000012341	sf1	86	87.629	Acanthochromis_polyacanthus
ENSMMOG00000020474	sf1	60	76.399	ENSAMEG00000017828	SF1	57	81.720	Ailuropoda_melanoleuca
ENSMMOG00000020474	sf1	66	89.862	ENSACIG00000016514	sf1	66	89.862	Amphilophus_citrinellus
ENSMMOG00000020474	sf1	87	89.813	ENSAOCG00000010934	sf1	86	88.124	Amphiprion_ocellaris
ENSMMOG00000020474	sf1	87	89.813	ENSAPEG00000009498	sf1	86	88.124	Amphiprion_percula
ENSMMOG00000020474	sf1	84	91.519	ENSATEG00000001894	sf1	86	89.119	Anabas_testudineus
ENSMMOG00000020474	sf1	59	70.075	ENSANAG00000022607	-	88	73.626	Aotus_nancymaae
ENSMMOG00000020474	sf1	60	78.102	ENSANAG00000026664	-	88	81.720	Aotus_nancymaae
ENSMMOG00000020474	sf1	67	90.826	ENSACLG00000007633	sf1	69	90.766	Astatotilapia_calliptera
ENSMMOG00000020474	sf1	73	83.984	ENSAMXG00000003630	sf1	76	82.168	Astyanax_mexicanus
ENSMMOG00000020474	sf1	60	76.399	ENSBTAG00000001035	SF1	61	81.720	Bos_taurus
ENSMMOG00000020474	sf1	60	76.399	ENSCJAG00000002780	SF1	75	67.717	Callithrix_jacchus
ENSMMOG00000020474	sf1	60	76.399	ENSCAFG00000014239	SF1	58	81.720	Canis_familiaris
ENSMMOG00000020474	sf1	60	76.399	ENSCAFG00020014381	SF1	58	81.720	Canis_lupus_dingo
ENSMMOG00000020474	sf1	60	76.399	ENSCHIG00000025867	SF1	67	81.720	Capra_hircus
ENSMMOG00000020474	sf1	60	70.443	ENSTSYG00000033618	SF1	82	90.036	Carlito_syrichta
ENSMMOG00000020474	sf1	59	76.601	ENSCAPG00000010762	SF1	65	82.016	Cavia_aperea
ENSMMOG00000020474	sf1	60	76.399	ENSCPOG00000012290	SF1	68	82.016	Cavia_porcellus
ENSMMOG00000020474	sf1	60	76.399	ENSCCAG00000037881	SF1	88	81.720	Cebus_capucinus
ENSMMOG00000020474	sf1	58	71.501	ENSCCAG00000023781	-	82	72.043	Cebus_capucinus
ENSMMOG00000020474	sf1	60	76.399	ENSCATG00000011564	SF1	88	81.720	Cercocebus_atys
ENSMMOG00000020474	sf1	60	76.399	ENSCSAG00000007258	SF1	67	81.720	Chlorocebus_sabaeus
ENSMMOG00000020474	sf1	57	71.611	ENSCHOG00000006008	SF1	66	76.705	Choloepus_hoffmanni
ENSMMOG00000020474	sf1	59	55.072	ENSCING00000005564	-	92	54.978	Ciona_intestinalis
ENSMMOG00000020474	sf1	71	53.441	ENSCSAVG00000009055	-	72	60.465	Ciona_savignyi
ENSMMOG00000020474	sf1	60	76.399	ENSCANG00000042201	SF1	88	81.720	Colobus_angolensis_palliatus
ENSMMOG00000020474	sf1	60	77.053	ENSCGRG00001003677	Sf1	65	81.720	Cricetulus_griseus_chok1gshd
ENSMMOG00000020474	sf1	59	77.262	ENSCGRG00000001708	Sf1	67	82.016	Cricetulus_griseus_crigri
ENSMMOG00000020474	sf1	71	86.128	ENSCSEG00000014375	sf1	65	87.033	Cynoglossus_semilaevis
ENSMMOG00000020474	sf1	66	87.500	ENSCVAG00000001670	sf1	67	87.500	Cyprinodon_variegatus
ENSMMOG00000020474	sf1	69	79.872	ENSDARG00000008188	sf1	64	90.710	Danio_rerio
ENSMMOG00000020474	sf1	60	76.399	ENSDNOG00000001282	SF1	67	81.720	Dasypus_novemcinctus
ENSMMOG00000020474	sf1	60	76.399	ENSDORG00000016334	Sf1	58	81.720	Dipodomys_ordii
ENSMMOG00000020474	sf1	59	71.216	ENSETEG00000012830	SF1	51	74.176	Echinops_telfairi
ENSMMOG00000020474	sf1	86	47.727	ENSEBUG00000012728	sf1	61	55.824	Eptatretus_burgeri
ENSMMOG00000020474	sf1	60	76.642	ENSEASG00005018272	SF1	67	81.989	Equus_asinus_asinus
ENSMMOG00000020474	sf1	60	76.642	ENSECAG00000024544	SF1	67	81.989	Equus_caballus
ENSMMOG00000020474	sf1	53	77.384	ENSEEUG00000001058	SF1	83	82.569	Erinaceus_europaeus
ENSMMOG00000020474	sf1	70	79.755	ENSELUG00000013225	sf1	60	82.571	Esox_lucius
ENSMMOG00000020474	sf1	60	76.399	ENSFCAG00000012231	SF1	75	67.262	Felis_catus
ENSMMOG00000020474	sf1	59	76.601	ENSFDAG00000009833	SF1	65	82.016	Fukomys_damarensis
ENSMMOG00000020474	sf1	67	86.813	ENSFHEG00000022656	sf1	67	86.784	Fundulus_heteroclitus
ENSMMOG00000020474	sf1	72	75.884	ENSGMOG00000007469	sf1	61	91.291	Gadus_morhua
ENSMMOG00000020474	sf1	85	86.082	ENSGAFG00000019284	sf1	74	86.623	Gambusia_affinis
ENSMMOG00000020474	sf1	56	90.691	ENSGACG00000000826	sf1	64	91.328	Gasterosteus_aculeatus
ENSMMOG00000020474	sf1	62	81.818	ENSGAGG00000021691	SF1	68	70.894	Gopherus_agassizii
ENSMMOG00000020474	sf1	67	88.184	ENSHBUG00000011598	sf1	67	88.816	Haplochromis_burtoni
ENSMMOG00000020474	sf1	60	76.399	ENSHGLG00000009541	SF1	65	81.720	Heterocephalus_glaber_female
ENSMMOG00000020474	sf1	59	76.601	ENSHGLG00100013879	-	65	82.016	Heterocephalus_glaber_male
ENSMMOG00000020474	sf1	69	84.188	ENSHCOG00000011388	sf1	67	85.398	Hippocampus_comes
ENSMMOG00000020474	sf1	59	76.601	ENSSTOG00000009790	-	58	82.016	Ictidomys_tridecemlineatus
ENSMMOG00000020474	sf1	55	70.811	ENSSTOG00000024353	-	66	72.703	Ictidomys_tridecemlineatus
ENSMMOG00000020474	sf1	60	76.642	ENSJJAG00000011788	Sf1	58	81.989	Jaculus_jaculus
ENSMMOG00000020474	sf1	84	87.895	ENSKMAG00000005854	sf1	89	85.445	Kryptolebias_marmoratus
ENSMMOG00000020474	sf1	65	89.953	ENSLBEG00000019836	sf1	72	87.118	Labrus_bergylta
ENSMMOG00000020474	sf1	74	72.200	ENSLACG00000018493	SF1	67	79.189	Latimeria_chalumnae
ENSMMOG00000020474	sf1	67	75.966	ENSLOCG00000002130	sf1	72	79.229	Lepisosteus_oculatus
ENSMMOG00000020474	sf1	60	76.812	ENSLAFG00000007201	SF1	63	80.851	Loxodonta_africana
ENSMMOG00000020474	sf1	60	76.399	ENSMFAG00000033122	SF1	88	81.720	Macaca_fascicularis
ENSMMOG00000020474	sf1	60	76.399	ENSMMUG00000022606	SF1	90	81.720	Macaca_mulatta
ENSMMOG00000020474	sf1	60	76.456	ENSMNEG00000037901	SF1	88	81.720	Macaca_nemestrina
ENSMMOG00000020474	sf1	60	76.399	ENSMLEG00000040706	SF1	89	81.501	Mandrillus_leucophaeus
ENSMMOG00000020474	sf1	84	91.213	ENSMAMG00000001780	sf1	86	88.832	Mastacembelus_armatus
ENSMMOG00000020474	sf1	67	88.184	ENSMZEG00005009196	sf1	67	88.816	Maylandia_zebra
ENSMMOG00000020474	sf1	60	77.053	ENSMAUG00000014064	Sf1	65	81.720	Mesocricetus_auratus
ENSMMOG00000020474	sf1	60	76.399	ENSMICG00000001202	SF1	88	81.501	Microcebus_murinus
ENSMMOG00000020474	sf1	60	76.642	ENSMOCG00000022038	Sf1	65	81.720	Microtus_ochrogaster
ENSMMOG00000020474	sf1	60	76.942	ENSMODG00000029407	SF1	80	81.989	Monodelphis_domestica
ENSMMOG00000020474	sf1	66	90.323	ENSMALG00000020521	sf1	72	90.323	Monopterus_albus
ENSMMOG00000020474	sf1	60	77.053	MGP_CAROLIEiJ_G0022607	Sf1	99	92.481	Mus_caroli
ENSMMOG00000020474	sf1	60	77.053	ENSMUSG00000024949	Sf1	99	92.481	Mus_musculus
ENSMMOG00000020474	sf1	60	77.053	MGP_PahariEiJ_G0014101	Sf1	99	92.481	Mus_pahari
ENSMMOG00000020474	sf1	60	77.053	MGP_SPRETEiJ_G0023518	Sf1	99	92.481	Mus_spretus
ENSMMOG00000020474	sf1	60	76.399	ENSMPUG00000012684	SF1	58	81.720	Mustela_putorius_furo
ENSMMOG00000020474	sf1	60	76.399	ENSMLUG00000015217	-	58	82.258	Myotis_lucifugus
ENSMMOG00000020474	sf1	64	72.789	ENSMLUG00000029800	-	63	78.167	Myotis_lucifugus
ENSMMOG00000020474	sf1	60	76.642	ENSNGAG00000005550	Sf1	65	81.989	Nannospalax_galili
ENSMMOG00000020474	sf1	67	90.826	ENSNBRG00000017606	sf1	68	90.766	Neolamprologus_brichardi
ENSMMOG00000020474	sf1	60	76.812	ENSNLEG00000005236	-	88	81.720	Nomascus_leucogenys
ENSMMOG00000020474	sf1	58	77.171	ENSMEUG00000013424	SF1	68	82.418	Notamacropus_eugenii
ENSMMOG00000020474	sf1	53	76.503	ENSOPRG00000005008	SF1	66	82.569	Ochotona_princeps
ENSMMOG00000020474	sf1	67	87.965	ENSONIG00000015728	sf1	67	88.596	Oreochromis_niloticus
ENSMMOG00000020474	sf1	60	76.399	ENSOCUG00000026486	SF1	59	81.720	Oryctolagus_cuniculus
ENSMMOG00000020474	sf1	69	83.582	ENSORLG00000011853	sf1	66	84.989	Oryzias_latipes
ENSMMOG00000020474	sf1	69	83.795	ENSORLG00020011834	sf1	66	85.210	Oryzias_latipes_hni
ENSMMOG00000020474	sf1	67	84.211	ENSORLG00015012855	sf1	66	84.768	Oryzias_latipes_hsok
ENSMMOG00000020474	sf1	84	86.396	ENSOMEG00000005210	sf1	86	83.737	Oryzias_melastigma
ENSMMOG00000020474	sf1	60	76.399	ENSOGAG00000016196	SF1	58	81.720	Otolemur_garnettii
ENSMMOG00000020474	sf1	60	76.399	ENSOARG00000009166	SF1	65	81.720	Ovis_aries
ENSMMOG00000020474	sf1	60	78.240	ENSPPAG00000002799	-	90	81.720	Pan_paniscus
ENSMMOG00000020474	sf1	60	76.399	ENSPPRG00000013566	SF1	57	83.051	Panthera_pardus
ENSMMOG00000020474	sf1	60	76.399	ENSPTIG00000016141	SF1	66	81.720	Panthera_tigris_altaica
ENSMMOG00000020474	sf1	60	78.240	ENSPTRG00000003846	SF1	88	81.720	Pan_troglodytes
ENSMMOG00000020474	sf1	60	76.399	ENSPANG00000020754	SF1	88	81.720	Papio_anubis
ENSMMOG00000020474	sf1	60	77.053	ENSPEMG00000010463	Sf1	65	81.720	Peromyscus_maniculatus_bairdii
ENSMMOG00000020474	sf1	61	62.683	ENSPMAG00000008272	sf1	58	63.081	Petromyzon_marinus
ENSMMOG00000020474	sf1	60	76.886	ENSPCIG00000018173	SF1	60	81.989	Phascolarctos_cinereus
ENSMMOG00000020474	sf1	66	87.061	ENSPFOG00000013683	sf1	61	93.370	Poecilia_formosa
ENSMMOG00000020474	sf1	75	87.767	ENSPLAG00000018076	sf1	61	88.060	Poecilia_latipinna
ENSMMOG00000020474	sf1	66	87.061	ENSPMEG00000005726	sf1	67	86.842	Poecilia_mexicana
ENSMMOG00000020474	sf1	66	86.404	ENSPREG00000004155	sf1	67	86.184	Poecilia_reticulata
ENSMMOG00000020474	sf1	60	76.399	ENSPPYG00000003098	-	70	81.720	Pongo_abelii
ENSMMOG00000020474	sf1	60	76.156	ENSPCAG00000013631	SF1	75	66.139	Procavia_capensis
ENSMMOG00000020474	sf1	60	76.399	ENSPCOG00000027546	SF1	88	81.501	Propithecus_coquereli
ENSMMOG00000020474	sf1	60	76.399	ENSPVAG00000016938	SF1	75	68.136	Pteropus_vampyrus
ENSMMOG00000020474	sf1	67	88.621	ENSPNYG00000004673	sf1	67	88.816	Pundamilia_nyererei
ENSMMOG00000020474	sf1	73	83.231	ENSPNAG00000013072	sf1	86	81.359	Pygocentrus_nattereri
ENSMMOG00000020474	sf1	60	77.053	ENSRNOG00000021085	Sf1	60	81.788	Rattus_norvegicus
ENSMMOG00000020474	sf1	60	76.399	ENSRBIG00000042818	SF1	88	81.720	Rhinopithecus_bieti
ENSMMOG00000020474	sf1	60	76.399	ENSRROG00000045655	SF1	89	81.501	Rhinopithecus_roxellana
ENSMMOG00000020474	sf1	59	68.460	ENSSBOG00000022267	-	84	72.674	Saimiri_boliviensis_boliviensis
ENSMMOG00000020474	sf1	58	78.734	ENSSHAG00000006841	SF1	68	82.385	Sarcophilus_harrisii
ENSMMOG00000020474	sf1	70	78.033	ENSSFOG00015021978	sf1	66	78.414	Scleropages_formosus
ENSMMOG00000020474	sf1	84	86.403	ENSSMAG00000007549	sf1	70	87.555	Scophthalmus_maximus
ENSMMOG00000020474	sf1	84	90.702	ENSSDUG00000003903	sf1	89	88.336	Seriola_dumerili
ENSMMOG00000020474	sf1	84	90.526	ENSSLDG00000013075	sf1	86	88.165	Seriola_lalandi_dorsalis
ENSMMOG00000020474	sf1	59	72.167	ENSSARG00000008180	SF1	71	77.112	Sorex_araneus
ENSMMOG00000020474	sf1	59	79.433	ENSSPUG00000012907	SF1	58	86.207	Sphenodon_punctatus
ENSMMOG00000020474	sf1	87	87.606	ENSSPAG00000019060	sf1	86	88.468	Stegastes_partitus
ENSMMOG00000020474	sf1	60	76.399	ENSSSCG00000013021	SF1	67	82.258	Sus_scrofa
ENSMMOG00000020474	sf1	73	71.346	ENSTNIG00000004820	sf1	72	77.632	Tetraodon_nigroviridis
ENSMMOG00000020474	sf1	59	70.545	ENSTBEG00000013133	SF1	62	65.632	Tupaia_belangeri
ENSMMOG00000020474	sf1	59	72.059	ENSTTRG00000008857	SF1	67	76.230	Tursiops_truncatus
ENSMMOG00000020474	sf1	60	76.399	ENSUMAG00000007268	SF1	71	81.720	Ursus_maritimus
ENSMMOG00000020474	sf1	60	76.399	ENSVVUG00000028585	SF1	67	81.720	Vulpes_vulpes
ENSMMOG00000020474	sf1	74	73.547	ENSXETG00000008434	sf1	63	83.469	Xenopus_tropicalis
ENSMMOG00000020474	sf1	72	88.957	ENSXCOG00000003704	sf1	79	92.010	Xiphophorus_couchianus
ENSMMOG00000020474	sf1	67	87.527	ENSXMAG00000007822	sf1	70	87.281	Xiphophorus_maculatus