EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000020518 (Gene tree)
Gene ID: -
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 903 bases
Position: chrKV751349.1:1087097-1087999
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000027116	zf-CCCH	PF00642.24	2.1e-29	1	3
ENSMMOP00000027116	zf-CCCH	PF00642.24	2.1e-29	2	3
ENSMMOP00000027116	zf-CCCH	PF00642.24	2.1e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000027579	-	903	-	ENSMMOP00000027116	300 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000020518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000020518's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000020518	cth1	90	68.727	ENSAPOG00000012552	cth1	90	69.091	Acanthochromis_polyacanthus
ENSMMOG00000020518	cth1	95	67.606	ENSACIG00000016026	cth1	95	65.147	Amphilophus_citrinellus
ENSMMOG00000020518	cth1	100	73.927	ENSAOCG00000001644	cth1	94	72.607	Amphiprion_ocellaris
ENSMMOG00000020518	cth1	100	73.927	ENSAPEG00000008930	cth1	94	72.607	Amphiprion_percula
ENSMMOG00000020518	cth1	99	78.618	ENSATEG00000002281	cth1	92	78.289	Anabas_testudineus
ENSMMOG00000020518	cth1	90	62.409	ENSACLG00000015353	cth1	91	63.636	Astatotilapia_calliptera
ENSMMOG00000020518	cth1	96	54.667	ENSAMXG00000025717	cth1	87	55.674	Astyanax_mexicanus
ENSMMOG00000020518	cth1	100	71.010	ENSCSEG00000014617	cth1	94	72.313	Cynoglossus_semilaevis
ENSMMOG00000020518	cth1	100	57.329	ENSCVAG00000001680	cth1	61	58.224	Cyprinodon_variegatus
ENSMMOG00000020518	cth1	85	61.132	ENSDARG00000057328	cth1	81	59.701	Danio_rerio
ENSMMOG00000020518	cth1	94	56.863	ENSELUG00000012738	cth1	61	64.734	Esox_lucius
ENSMMOG00000020518	cth1	100	62.171	ENSFHEG00000022665	cth1	94	59.076	Fundulus_heteroclitus
ENSMMOG00000020518	cth1	100	65.359	ENSGMOG00000007360	cth1	95	65.033	Gadus_morhua
ENSMMOG00000020518	cth1	100	62.866	ENSGAFG00000019288	cth1	94	62.541	Gambusia_affinis
ENSMMOG00000020518	cth1	100	67.881	ENSGACG00000000802	cth1	94	66.230	Gasterosteus_aculeatus
ENSMMOG00000020518	cth1	100	64.356	ENSHBUG00000014400	cth1	95	65.461	Haplochromis_burtoni
ENSMMOG00000020518	cth1	99	51.163	ENSHCOG00000010276	cth1	93	50.498	Hippocampus_comes
ENSMMOG00000020518	cth1	96	54.934	ENSIPUG00000018040	cth1	84	55.396	Ictalurus_punctatus
ENSMMOG00000020518	cth1	100	64.356	ENSKMAG00000005944	cth1	94	63.036	Kryptolebias_marmoratus
ENSMMOG00000020518	cth1	100	77.049	ENSLBEG00000019253	cth1	94	76.974	Labrus_bergylta
ENSMMOG00000020518	cth1	67	49.746	ENSLOCG00000002047	cth1	90	49.746	Lepisosteus_oculatus
ENSMMOG00000020518	cth1	94	57.270	ENSMAMG00000001525	cth1	55	72.549	Mastacembelus_armatus
ENSMMOG00000020518	cth1	100	64.356	ENSMZEG00005022335	cth1	95	65.461	Maylandia_zebra
ENSMMOG00000020518	cth1	100	58.543	ENSMALG00000020738	cth1	53	69.951	Monopterus_albus
ENSMMOG00000020518	cth1	95	63.380	ENSNBRG00000022789	cth1	88	64.561	Neolamprologus_brichardi
ENSMMOG00000020518	cth1	100	66.007	ENSONIG00000021318	cth1	95	67.105	Oreochromis_niloticus
ENSMMOG00000020518	cth1	100	57.807	ENSORLG00000022847	cth1	94	57.947	Oryzias_latipes
ENSMMOG00000020518	cth1	100	58.804	ENSORLG00020011979	cth1	94	58.940	Oryzias_latipes_hni
ENSMMOG00000020518	cth1	100	57.807	ENSORLG00015013084	cth1	94	57.947	Oryzias_latipes_hsok
ENSMMOG00000020518	cth1	87	60.305	ENSOMEG00000005809	cth1	81	60.870	Oryzias_melastigma
ENSMMOG00000020518	cth1	97	50.311	ENSPKIG00000015883	cth1	88	49.498	Paramormyrops_kingsleyae
ENSMMOG00000020518	cth1	100	71.521	ENSPMGG00000004275	cth1	96	71.521	Periophthalmus_magnuspinnatus
ENSMMOG00000020518	cth1	100	63.816	ENSPFOG00000013583	cth1	88	62.829	Poecilia_formosa
ENSMMOG00000020518	cth1	100	64.145	ENSPLAG00000018158	cth1	88	63.158	Poecilia_latipinna
ENSMMOG00000020518	cth1	100	63.816	ENSPMEG00000005744	cth1	94	62.829	Poecilia_mexicana
ENSMMOG00000020518	cth1	100	64.474	ENSPREG00000004099	cth1	94	63.487	Poecilia_reticulata
ENSMMOG00000020518	cth1	96	61.168	ENSPNYG00000016705	cth1	85	61.255	Pundamilia_nyererei
ENSMMOG00000020518	cth1	93	57.192	ENSPNAG00000013147	cth1	82	55.515	Pygocentrus_nattereri
ENSMMOG00000020518	cth1	97	51.792	ENSSFOG00015017190	cth1	68	56.696	Scleropages_formosus
ENSMMOG00000020518	cth1	100	75.578	ENSSMAG00000007977	cth1	94	75.578	Scophthalmus_maximus
ENSMMOG00000020518	cth1	100	75.484	ENSSDUG00000004321	cth1	95	77.097	Seriola_dumerili
ENSMMOG00000020518	cth1	100	76.527	ENSSLDG00000004516	-	95	77.170	Seriola_lalandi_dorsalis
ENSMMOG00000020518	cth1	100	76.527	ENSSLDG00000012760	cth1	95	77.170	Seriola_lalandi_dorsalis
ENSMMOG00000020518	cth1	99	76.774	ENSSLDG00000010023	-	95	77.419	Seriola_lalandi_dorsalis
ENSMMOG00000020518	cth1	100	71.947	ENSSPAG00000018659	cth1	94	75.578	Stegastes_partitus
ENSMMOG00000020518	cth1	100	67.657	ENSTRUG00000012770	cth1	94	67.550	Takifugu_rubripes
ENSMMOG00000020518	cth1	100	67.219	ENSTNIG00000000740	cth1	94	67.219	Tetraodon_nigroviridis
ENSMMOG00000020518	cth1	88	55.849	ENSXCOG00000003710	cth1	82	53.200	Xiphophorus_couchianus
ENSMMOG00000020518	cth1	100	62.418	ENSXMAG00000023885	cth1	94	61.438	Xiphophorus_maculatus